RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 VPS37DQ86XT2 251 aa10.19□□□□□ -0.78
CHD7-203ENST00000525508 HTATSF1O43719 755 aaKnown RBP10.19□□□□□ -0.78
CHD7-203ENST00000525508 MEX3CQ5U5Q3 659 aaKnown RBP10.19□□□□□ -0.78
CHD7-203ENST00000525508 DDX54Q8TDD1 881 aaKnown RBP10.19□□□□□ -0.78
CHD7-203ENST00000525508 SURF6O75683 361 aaKnown RBP10.19□□□□□ -0.78
CHD7-203ENST00000525508 PRKCSHP14314 528 aaPredicted RBP10.19□□□□□ -0.78
CHD7-203ENST00000525508 ZC3H6P61129 1189 aaKnown RBP10.18□□□□□ -0.78
CHD7-203ENST00000525508 PNISRQ8TF01 805 aaKnown RBP10.18□□□□□ -0.78
CHD7-203ENST00000525508 RBM42Q9BTD8 480 aaKnown RBP10.18□□□□□ -0.78
CHD7-203ENST00000525508 MTMR7Q9Y216 660 aa10.18□□□□□ -0.78
CHD7-203ENST00000525508 SNAPC4Q5SXM2 1469 aa10.18□□□□□ -0.78
CHD7-203ENST00000525508 AKNAQ7Z591 1439 aa10.18□□□□□ -0.78
CHD7-203ENST00000525508 UBTFL1P0CB47 393 aaPredicted RBP10.18□□□□□ -0.78
CHD7-203ENST00000525508 SKAP1Q86WV1 359 aa10.18□□□□□ -0.78
CHD7-203ENST00000525508 VPS37CA5D8V6 355 aaPredicted RBP10.18□□□□□ -0.78
CHD7-203ENST00000525508 NUTM2BA6NNL0 878 aaPredicted RBP10.18□□□□□ -0.78
CHD7-203ENST00000525508 NUTM2EB1AL46 878 aaPredicted RBP10.18□□□□□ -0.78
CHD7-203ENST00000525508 FYB1O15117 783 aa10.18□□□□□ -0.78
CHD7-203ENST00000525508 ZKSCAN1P17029 563 aaPredicted RBP10.18□□□□□ -0.78
CHD7-203ENST00000525508 TWISTNBQ3B726 338 aaPredicted RBP10.18□□□□□ -0.78
CHD7-203ENST00000525508 NUTM2AQ8IVF1 878 aaPredicted RBP10.18□□□□□ -0.78
CHD7-203ENST00000525508 MIS18AQ9NYP9 233 aa10.18□□□□□ -0.78
CHD7-203ENST00000525508 CDK13Q14004 1512 aaKnown RBP10.18□□□□□ -0.78
CHD7-203ENST00000525508 REC8O95072 547 aa10.17□□□□□ -0.78
CHD7-203ENST00000525508 SLC4A2P04920 1241 aa10.17□□□□□ -0.78
CHD7-203ENST00000525508 CEBPAP49715 358 aaPredicted RBP10.17□□□□□ -0.78
CHD7-203ENST00000525508 RRBP1Q9P2E9 1410 aaKnown RBP10.17□□□□□ -0.78
CHD7-203ENST00000525508 AEBP2Q6ZN18 517 aaPredicted RBP10.17□□□□□ -0.78
CHD7-203ENST00000525508 WWC1Q8IX03 1113 aa10.17□□□□□ -0.78
CHD7-203ENST00000525508 CC2D2AQ9P2K1 1620 aa10.17□□□□□ -0.78
CHD7-203ENST00000525508 NOB1Q9ULX3 412 aaKnown RBP10.16□□□□□ -0.78
CHD7-203ENST00000525508 TROQ12816 1431 aaPredicted RBP10.16□□□□□ -0.78
CHD7-203ENST00000525508 WASHC4Q2M389 1173 aa10.16□□□□□ -0.78
CHD7-203ENST00000525508 FBXO31Q5XUX0 539 aaPredicted RBP10.16□□□□□ -0.78
CHD7-203ENST00000525508 C22orf23Q9BZE7 217 aa10.16□□□□□ -0.78
CHD7-203ENST00000525508 STAC3Q96MF2 364 aa10.16□□□□□ -0.78
CHD7-203ENST00000525508 CPLX1O14810 134 aa10.15□□□□□ -0.78
CHD7-203ENST00000525508 DHX16O60231 1041 aaKnown RBP10.15□□□□□ -0.78
CHD7-203ENST00000525508 DCTN1Q14203 1278 aa10.15□□□□□ -0.78
CHD7-203ENST00000525508 BRD4O60885 1362 aaPredicted RBP10.15□□□□□ -0.78
CHD7-203ENST00000525508 KIAA1107Q9UPP5 1409 aa10.15□□□□□ -0.78
CHD7-203ENST00000525508 AKAP17AQ02040 695 aaKnown RBP10.15□□□□□ -0.78
CHD7-203ENST00000525508 HDGFL1Q5TGJ6 251 aa10.15□□□□□ -0.78
CHD7-203ENST00000525508 SIL1Q9H173 461 aa10.15□□□□□ -0.78
CHD7-203ENST00000525508 MIA2Q96PC5 1412 aa10.15□□□□□ -0.78
CHD7-203ENST00000525508 MYL6BP14649 208 aa10.15□□□□□ -0.79
CHD7-203ENST00000525508 THEMISQ8N1K5 641 aaPredicted RBP10.15□□□□□ -0.79
CHD7-203ENST00000525508 RUFY2Q8WXA3 655 aa10.15□□□□□ -0.79
CHD7-203ENST00000525508 PDZRN3Q9UPQ7 1066 aa10.14□□□□□ -0.79
CHD7-203ENST00000525508 GPRASP1Q5JY77 1395 aa10.14□□□□□ -0.79
CHD7-203ENST00000525508 CCDC85AQ96PX6 553 aaPredicted RBP10.14□□□□□ -0.79
CHD7-203ENST00000525508 ZNF530Q6P9A1 599 aaPredicted RBP10.14□□□□□ -0.79
CHD7-203ENST00000525508 SLC52A1Q9NWF4 448 aa10.14□□□□□ -0.79
CHD7-203ENST00000525508 KIF3AQ9Y496 699 aa10.14□□□□□ -0.79
CHD7-203ENST00000525508 FBLN1P23142 703 aa10.13□□□□□ -0.79
CHD7-203ENST00000525508 CCDC27Q2M243 656 aa10.13□□□□□ -0.79
CHD7-203ENST00000525508 TOM1L2Q6ZVM7 507 aa10.13□□□□□ -0.79
CHD7-203ENST00000525508 RSPH6AQ9H0K4 717 aa10.13□□□□□ -0.79
CHD7-203ENST00000525508 MRC2Q9UBG0 1479 aa10.13□□□□□ -0.79
CHD7-203ENST00000525508 STK11IPQ8N1F8 1099 aa10.13□□□□□ -0.79
CHD7-203ENST00000525508 ARHGEF11O15085 1522 aa10.13□□□□□ -0.79
CHD7-203ENST00000525508 PLB1Q6P1J6 1458 aa10.13□□□□□ -0.79
CHD7-203ENST00000525508 SYNE3Q6ZMZ3 975 aa10.13□□□□□ -0.79
CHD7-203ENST00000525508 DNAJC2Q99543 621 aaKnown RBP10.13□□□□□ -0.79
CHD7-203ENST00000525508 MAP4K4O95819 1239 aaPredicted RBP10.13□□□□□ -0.79
CHD7-203ENST00000525508 BCL11BQ9C0K0 894 aaPredicted RBP10.13□□□□□ -0.79
CHD7-203ENST00000525508 BECN2A8MW95 431 aa10.12□□□□□ -0.79
CHD7-203ENST00000525508 PIP4K2BP78356 416 aa10.12□□□□□ -0.79
CHD7-203ENST00000525508 NFXL1Q6ZNB6 911 aa10.12□□□□□ -0.79
CHD7-203ENST00000525508 CLASRPQ8N2M8 674 aaKnown RBP10.12□□□□□ -0.79
CHD7-203ENST00000525508 TRDNQ13061 729 aa10.12□□□□□ -0.79
CHD7-203ENST00000525508 GSE1Q14687 1217 aa10.12□□□□□ -0.79
CHD7-203ENST00000525508 HFM1A2PYH4 1435 aa10.12□□□□□ -0.79
CHD7-203ENST00000525508 INTS3Q68E01 1043 aaKnown RBP10.12□□□□□ -0.79
CHD7-203ENST00000525508 CCDC34Q96HJ3 373 aa10.12□□□□□ -0.79
CHD7-203ENST00000525508 PHF23Q9BUL5 403 aaPredicted RBP10.12□□□□□ -0.79
CHD7-203ENST00000525508 PRDM11Q9NQV5 511 aa10.12□□□□□ -0.79
CHD7-203ENST00000525508 ATP2B1P20020 1258 aa10.11□□□□□ -0.79
CHD7-203ENST00000525508 CPLX2Q6PUV4 134 aaKnown RBP10.11□□□□□ -0.79
CHD7-203ENST00000525508 GAS2L2Q8NHY3 880 aa10.11□□□□□ -0.79
CHD7-203ENST00000525508 BICD2Q8TD16 824 aa10.11□□□□□ -0.79
CHD7-203ENST00000525508 CHMP4CQ96CF2 233 aa10.11□□□□□ -0.79
CHD7-203ENST00000525508 ERBINQ96RT1 1412 aa10.11□□□□□ -0.79
CHD7-203ENST00000525508 CCDC30Q5VVM6 783 aa10.11□□□□□ -0.79
CHD7-203ENST00000525508 USHBP1Q8N6Y0 703 aa10.11□□□□□ -0.79
CHD7-203ENST00000525508 FSD1Q9BTV5 496 aa10.11□□□□□ -0.79
CHD7-203ENST00000525508 WDR97A6NE52 1622 aa10.11□□□□□ -0.79
CHD7-203ENST00000525508 FOXO3O43524 673 aa10.11□□□□□ -0.79
CHD7-203ENST00000525508 PLEKHO1Q53GL0 409 aaPredicted RBP10.11□□□□□ -0.79
CHD7-203ENST00000525508 ERICH3Q5RHP9 1530 aa10.11□□□□□ -0.79
CHD7-203ENST00000525508 DAPK1P53355 1430 aa10.11□□□□□ -0.79
CHD7-203ENST00000525508 NAIPQ13075 1403 aa10.11□□□□□ -0.79
CHD7-203ENST00000525508 DDX11L8A8MPP1 907 aa10.11□□□□□ -0.79
CHD7-203ENST00000525508 PTMSP20962 102 aa10.11□□□□□ -0.79
CHD7-203ENST00000525508 TPM4P67936 248 aa10.11□□□□□ -0.79
CHD7-203ENST00000525508 CSPP1Q1MSJ5 1256 aa10.11□□□□□ -0.79
CHD7-203ENST00000525508 MCM10Q7L590 875 aa10.11□□□□□ -0.79
CHD7-203ENST00000525508 NEK4P51957 841 aa10.1□□□□□ -0.79
CHD7-203ENST00000525508 NUDT16Q96DE0 195 aaKnown RBP10.1□□□□□ -0.79
CHD7-203ENST00000525508 IL1RAPL2Q9NP60 686 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms