RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 SPDYE5A6NIY4 337 aa9.06□□□□□ -0.96
USP47-206ENST00000525367 NUTM2BA6NNL0 878 aaPredicted RBP9.06□□□□□ -0.96
USP47-206ENST00000525367 NUTM2EB1AL46 878 aaPredicted RBP9.06□□□□□ -0.96
USP47-206ENST00000525367 AP1G2O75843 785 aa9.06□□□□□ -0.96
USP47-206ENST00000525367 HDGFP51858 240 aaKnown RBP9.06□□□□□ -0.96
USP47-206ENST00000525367 NUTM2DQ5VT03 806 aaPredicted RBP9.06□□□□□ -0.96
USP47-206ENST00000525367 NUTM2AQ8IVF1 878 aaPredicted RBP9.06□□□□□ -0.96
USP47-206ENST00000525367 ARID3AQ99856 593 aa9.06□□□□□ -0.96
USP47-206ENST00000525367 COG6Q9Y2V7 657 aa9.06□□□□□ -0.96
USP47-206ENST00000525367 SOWAHBA6NEL2 793 aa9.05□□□□□ -0.96
USP47-206ENST00000525367 A6NJR5 290 aa9.05□□□□□ -0.96
USP47-206ENST00000525367 GJA5P36382 358 aa9.05□□□□□ -0.96
USP47-206ENST00000525367 BCAMP50895 628 aa9.05□□□□□ -0.96
USP47-206ENST00000525367 USP46P62068 366 aa9.05□□□□□ -0.96
USP47-206ENST00000525367 RSPH4AQ5TD94 716 aa9.05□□□□□ -0.96
USP47-206ENST00000525367 SYMPKQ92797 1274 aaKnown RBP9.05□□□□□ -0.96
USP47-206ENST00000525367 TRAK2O60296 914 aa9.04□□□□□ -0.96
USP47-206ENST00000525367 LAPTM4AQ15012 233 aa9.04□□□□□ -0.96
USP47-206ENST00000525367 TMEM259Q4ZIN3 620 aa9.04□□□□□ -0.96
USP47-206ENST00000525367 BANK1Q8NDB2 785 aa9.04□□□□□ -0.96
USP47-206ENST00000525367 ZBTB3Q9H5J0 574 aa9.04□□□□□ -0.96
USP47-206ENST00000525367 APBB1O00213 710 aa9.03□□□□□ -0.96
USP47-206ENST00000525367 USP17L8P0C7I0 530 aa9.03□□□□□ -0.96
USP47-206ENST00000525367 PUS10Q3MIT2 529 aaKnown RBP9.03□□□□□ -0.96
USP47-206ENST00000525367 PROSER2Q86WR7 435 aaPredicted RBP9.03□□□□□ -0.96
USP47-206ENST00000525367 KCNC4Q03721 635 aa9.02□□□□□ -0.97
USP47-206ENST00000525367 PRPF38BQ5VTL8 546 aaKnown RBP9.02□□□□□ -0.97
USP47-206ENST00000525367 FNBP4Q8N3X1 1017 aaPredicted RBP9.02□□□□□ -0.97
USP47-206ENST00000525367 LRCH3Q96II8 777 aa9.02□□□□□ -0.97
USP47-206ENST00000525367 CFAP99D6REC4 459 aa9.01□□□□□ -0.97
USP47-206ENST00000525367 GDPD2Q9HCC8 539 aa9.01□□□□□ -0.97
USP47-206ENST00000525367 HMX1Q9NP08 348 aaPredicted RBP9.01□□□□□ -0.97
USP47-206ENST00000525367 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.01□□□□□ -0.97
USP47-206ENST00000525367 C6orf229H3BNL8 230 aa9□□□□□ -0.97
USP47-206ENST00000525367 SLC4A3P48751 1232 aa9□□□□□ -0.97
USP47-206ENST00000525367 CTDSPL2Q05D32 466 aa9□□□□□ -0.97
USP47-206ENST00000525367 MTMR2Q13614 643 aa9□□□□□ -0.97
USP47-206ENST00000525367 TSC1Q92574 1164 aa9□□□□□ -0.97
USP47-206ENST00000525367 WBP1LQ9NX94 342 aa9□□□□□ -0.97
USP47-206ENST00000525367 ZNF777Q9ULD5 760 aaPredicted RBP9□□□□□ -0.97
USP47-206ENST00000525367 ATP6V1AP38606 617 aa8.99□□□□□ -0.97
USP47-206ENST00000525367 TBC1D2BQ9UPU7 963 aa8.99□□□□□ -0.97
USP47-206ENST00000525367 RAD21O60216 631 aa8.98□□□□□ -0.97
USP47-206ENST00000525367 MORN1Q5T089 497 aa8.98□□□□□ -0.97
USP47-206ENST00000525367 TRAF7Q6Q0C0 670 aa8.98□□□□□ -0.97
USP47-206ENST00000525367 LRRN4Q8WUT4 740 aa8.98□□□□□ -0.97
USP47-206ENST00000525367 GJD4Q96KN9 370 aaPredicted RBP8.98□□□□□ -0.97
USP47-206ENST00000525367 APLP1P51693 650 aa8.97□□□□□ -0.97
USP47-206ENST00000525367 KMT5BQ4FZB7 885 aa8.97□□□□□ -0.97
USP47-206ENST00000525367 HPS5Q9UPZ3 1129 aa8.97□□□□□ -0.97
USP47-206ENST00000525367 SLC27A5Q9Y2P5 690 aa8.97□□□□□ -0.97
USP47-206ENST00000525367 ACTN4O43707 911 aaKnown RBP8.96□□□□□ -0.98
USP47-206ENST00000525367 ABL2P42684 1182 aa8.96□□□□□ -0.98
USP47-206ENST00000525367 RNF19BQ6ZMZ0 732 aa8.96□□□□□ -0.98
USP47-206ENST00000525367 CCDC82Q8N4S0 544 aa8.96□□□□□ -0.98
USP47-206ENST00000525367 GRIPAP1Q4V328 841 aa8.95□□□□□ -0.98
USP47-206ENST00000525367 BLOC1S3Q6QNY0 202 aa8.95□□□□□ -0.98
USP47-206ENST00000525367 EPS8L1Q8TE68 723 aa8.95□□□□□ -0.98
USP47-206ENST00000525367 PER1O15534 1290 aaPredicted RBP8.94□□□□□ -0.98
USP47-206ENST00000525367 GFRA3O60609 400 aa8.94□□□□□ -0.98
USP47-206ENST00000525367 GPR37L1O60883 481 aa8.94□□□□□ -0.98
USP47-206ENST00000525367 PRR7Q8TB68 274 aa8.94□□□□□ -0.98
USP47-206ENST00000525367 TRIM34Q9BYJ4 488 aa8.94□□□□□ -0.98
USP47-206ENST00000525367 POM121CA8CG34 1229 aa8.93□□□□□ -0.98
USP47-206ENST00000525367 PPP4CP60510 307 aa8.93□□□□□ -0.98
USP47-206ENST00000525367 TSR3Q9UJK0 312 aaKnown RBP8.92□□□□□ -0.98
USP47-206ENST00000525367 HELBQ8NG08 1087 aaPredicted RBP8.91□□□□□ -0.98
USP47-206ENST00000525367 ZNF330Q9Y3S2 320 aaPredicted RBP8.91□□□□□ -0.98
USP47-206ENST00000525367 NRG2O14511 850 aaPredicted RBP8.9□□□□□ -0.98
USP47-206ENST00000525367 IRF5Q13568 498 aa8.9□□□□□ -0.98
USP47-206ENST00000525367 SOCS7O14512 581 aa8.89□□□□□ -0.99
USP47-206ENST00000525367 RETREG3Q86VR2 466 aa8.89□□□□□ -0.99
USP47-206ENST00000525367 PCDHB3Q9Y5E6 796 aa8.89□□□□□ -0.99
USP47-206ENST00000525367 NDUFB9Q9Y6M9 179 aa8.89□□□□□ -0.99
USP47-206ENST00000525367 NR6A1Q15406 480 aa8.88□□□□□ -0.99
USP47-206ENST00000525367 SCUBE3Q8IX30 993 aa8.87□□□□□ -0.99
USP47-206ENST00000525367 NECTIN2Q92692 538 aa8.87□□□□□ -0.99
USP47-206ENST00000525367 THAP11Q96EK4 314 aa8.87□□□□□ -0.99
USP47-206ENST00000525367 Q3C1V9 767 aa8.86□□□□□ -0.99
USP47-206ENST00000525367 BRICD5Q6PL45 260 aa8.86□□□□□ -0.99
USP47-206ENST00000525367 PRR14Q9BWN1 585 aa8.86□□□□□ -0.99
USP47-206ENST00000525367 COPS2P61201 443 aa8.85□□□□□ -0.99
USP47-206ENST00000525367 TJAP1Q5JTD0 557 aa8.85□□□□□ -0.99
USP47-206ENST00000525367 PRKD2Q9BZL6 878 aa8.85□□□□□ -0.99
USP47-206ENST00000525367 TLL1O43897 1013 aa8.84□□□□□ -0.99
USP47-206ENST00000525367 VAC14Q08AM6 782 aa8.84□□□□□ -0.99
USP47-206ENST00000525367 ADAMTS19Q8TE59 1207 aa8.84□□□□□ -0.99
USP47-206ENST00000525367 USB1Q9BQ65 265 aaKnown RBP8.84□□□□□ -0.99
USP47-206ENST00000525367 PRDM9Q9NQV7 894 aa8.84□□□□□ -0.99
USP47-206ENST00000525367 V9GY48 417 aaPredicted RBP8.84□□□□□ -0.99
USP47-206ENST00000525367 GLMNQ92990 594 aa8.83□□□□□ -1
USP47-206ENST00000525367 LYPD8Q6UX82 237 aa8.82□□□□□ -1
USP47-206ENST00000525367 PRM3Q9NNZ6 103 aa8.82□□□□□ -1
USP47-206ENST00000525367 MAP10Q9P2G4 905 aa8.82□□□□□ -1
USP47-206ENST00000525367 NR1I2O75469 434 aa8.81□□□□□ -1
USP47-206ENST00000525367 FMNL1O95466 1100 aaPredicted RBP8.81□□□□□ -1
USP47-206ENST00000525367 DESI1Q6ICB0 168 aa8.81□□□□□ -1
USP47-206ENST00000525367 FAM160A2Q8N612 972 aaPredicted RBP8.81□□□□□ -1
USP47-206ENST00000525367 CCDC97Q96F63 343 aaPredicted RBP8.81□□□□□ -1
USP47-206ENST00000525367 CALR3Q96L12 384 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms