RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 RPUSD2Q8IZ73 545 aaKnown RBP8.4□□□□□ -1.06
LIN7C-202ENST00000524596 CEP89Q96ST8 783 aa8.4□□□□□ -1.06
LIN7C-202ENST00000524596 TOMM22Q9NS69 142 aa8.4□□□□□ -1.06
LIN7C-202ENST00000524596 FMNL3Q8IVF7 1028 aa8.4□□□□□ -1.06
LIN7C-202ENST00000524596 CTAGE5O15320 804 aa8.39□□□□□ -1.07
LIN7C-202ENST00000524596 CDR1P51861 262 aa8.39□□□□□ -1.07
LIN7C-202ENST00000524596 DBN1Q16643 649 aa8.39□□□□□ -1.07
LIN7C-202ENST00000524596 PPP2R5AQ15172 486 aa8.39□□□□□ -1.07
LIN7C-202ENST00000524596 ZKSCAN2Q63HK3 967 aa8.39□□□□□ -1.07
LIN7C-202ENST00000524596 NBPF10Q6P3W6 841 aaKnown RBP8.39□□□□□ -1.07
LIN7C-202ENST00000524596 NUB1Q9Y5A7 615 aa8.39□□□□□ -1.07
LIN7C-202ENST00000524596 MAP2K2P36507 400 aa8.39□□□□□ -1.07
LIN7C-202ENST00000524596 CSB-PGBD3P0DP91 1061 aa8.38□□□□□ -1.07
LIN7C-202ENST00000524596 HNRNPUQ00839 825 aaKnown RBP eCLIP8.38□□□□□ -1.07
LIN7C-202ENST00000524596 RBBP5Q15291 538 aaKnown RBP8.38□□□□□ -1.07
LIN7C-202ENST00000524596 SMC3Q9UQE7 1217 aa8.38□□□□□ -1.07
LIN7C-202ENST00000524596 SESN3P58005 492 aa8.38□□□□□ -1.07
LIN7C-202ENST00000524596 SLC20A2Q08357 652 aa8.38□□□□□ -1.07
LIN7C-202ENST00000524596 TRIM52Q96A61 297 aa8.38□□□□□ -1.07
LIN7C-202ENST00000524596 DIAPH3Q9NSV4 1193 aa8.38□□□□□ -1.07
LIN7C-202ENST00000524596 KRBA2Q6ZNG9 492 aa8.38□□□□□ -1.07
LIN7C-202ENST00000524596 SPINK5Q9NQ38 1064 aaPredicted RBP8.38□□□□□ -1.07
LIN7C-202ENST00000524596 MIPOL1Q8TD10 442 aa8.37□□□□□ -1.07
LIN7C-202ENST00000524596 RMDN2Q96LZ7 410 aa8.37□□□□□ -1.07
LIN7C-202ENST00000524596 CHCHD3Q9NX63 227 aaKnown RBP8.37□□□□□ -1.07
LIN7C-202ENST00000524596 TPM1P09493 284 aa8.37□□□□□ -1.07
LIN7C-202ENST00000524596 DNAAF4Q8WXU2 420 aa8.37□□□□□ -1.07
LIN7C-202ENST00000524596 FAM160A1Q05DH4 1040 aa8.37□□□□□ -1.07
LIN7C-202ENST00000524596 LONRF3Q496Y0 759 aa8.37□□□□□ -1.07
LIN7C-202ENST00000524596 DYDC1Q8WWB3 177 aa8.37□□□□□ -1.07
LIN7C-202ENST00000524596 INCENPQ9NQS7 918 aa8.37□□□□□ -1.07
LIN7C-202ENST00000524596 IRAK4Q9NWZ3 460 aa8.37□□□□□ -1.07
LIN7C-202ENST00000524596 PNMA2Q9UL42 364 aa8.37□□□□□ -1.07
LIN7C-202ENST00000524596 BRD1O95696 1058 aa8.37□□□□□ -1.07
LIN7C-202ENST00000524596 NBPF7P0C2Y1 421 aaPredicted RBP8.37□□□□□ -1.07
LIN7C-202ENST00000524596 WDR43Q15061 677 aaKnown RBP eCLIP8.36□□□□□ -1.07
LIN7C-202ENST00000524596 HSP90B2PQ58FF3 399 aa8.36□□□□□ -1.07
LIN7C-202ENST00000524596 RUFY1Q96T51 708 aa8.36□□□□□ -1.07
LIN7C-202ENST00000524596 KIAA1328Q86T90 577 aa8.36□□□□□ -1.07
LIN7C-202ENST00000524596 RNF168Q8IYW5 571 aaPredicted RBP8.36□□□□□ -1.07
LIN7C-202ENST00000524596 RNF214Q8ND24 703 aa8.36□□□□□ -1.07
LIN7C-202ENST00000524596 RGL3Q3MIN7 710 aa8.36□□□□□ -1.07
LIN7C-202ENST00000524596 GABPB1Q06547 395 aaPredicted RBP8.35□□□□□ -1.07
LIN7C-202ENST00000524596 NAP1L4Q99733 375 aaKnown RBP8.35□□□□□ -1.07
LIN7C-202ENST00000524596 PPP1R12AO14974 1030 aaPredicted RBP8.35□□□□□ -1.07
LIN7C-202ENST00000524596 SASS6Q6UVJ0 657 aa8.35□□□□□ -1.07
LIN7C-202ENST00000524596 DNAI2Q9GZS0 605 aa8.35□□□□□ -1.07
LIN7C-202ENST00000524596 FOXD4Q12950 439 aaPredicted RBP8.35□□□□□ -1.07
LIN7C-202ENST00000524596 TRDNQ13061 729 aa8.35□□□□□ -1.07
LIN7C-202ENST00000524596 MYBPC2Q14324 1141 aa8.35□□□□□ -1.07
LIN7C-202ENST00000524596 B4GALNT3Q6L9W6 998 aa8.35□□□□□ -1.07
LIN7C-202ENST00000524596 RSPH14Q9UHP6 348 aa8.35□□□□□ -1.07
LIN7C-202ENST00000524596 ZSCAN30Q86W11 494 aa8.34□□□□□ -1.07
LIN7C-202ENST00000524596 IQCGQ9H095 443 aaKnown RBP8.34□□□□□ -1.07
LIN7C-202ENST00000524596 SWAP70Q9UH65 585 aa8.34□□□□□ -1.07
LIN7C-202ENST00000524596 NGEFQ8N5V2 710 aa8.34□□□□□ -1.07
LIN7C-202ENST00000524596 PROCA1Q8NCQ7 364 aaPredicted RBP8.34□□□□□ -1.07
LIN7C-202ENST00000524596 SYAP1Q96A49 352 aaPredicted RBP8.34□□□□□ -1.07
LIN7C-202ENST00000524596 AK7Q96M32 723 aa8.34□□□□□ -1.07
LIN7C-202ENST00000524596 INF2Q27J81 1249 aa8.34□□□□□ -1.07
LIN7C-202ENST00000524596 JAKMIP3Q5VZ66 844 aa8.34□□□□□ -1.07
LIN7C-202ENST00000524596 KIF2CQ99661 725 aa8.34□□□□□ -1.07
LIN7C-202ENST00000524596 NOL10Q9BSC4 688 aaKnown RBP8.34□□□□□ -1.07
LIN7C-202ENST00000524596 STK31Q9BXU1 1019 aa8.34□□□□□ -1.07
LIN7C-202ENST00000524596 A0A1B0GUL7 405 aa8.34□□□□□ -1.07
LIN7C-202ENST00000524596 CIZ1Q9ULV3 898 aaPredicted RBP8.34□□□□□ -1.07
LIN7C-202ENST00000524596 ICE2Q659A1 982 aa8.33□□□□□ -1.08
LIN7C-202ENST00000524596 RRAGDQ9NQL2 400 aaPredicted RBP8.33□□□□□ -1.08
LIN7C-202ENST00000524596 MAGEC2Q9UBF1 373 aaPredicted RBP8.33□□□□□ -1.08
LIN7C-202ENST00000524596 MNAT1P51948 309 aa8.33□□□□□ -1.08
LIN7C-202ENST00000524596 RABEP1Q15276 862 aa8.33□□□□□ -1.08
LIN7C-202ENST00000524596 WWC2Q6AWC2 1192 aa8.33□□□□□ -1.08
LIN7C-202ENST00000524596 RASSF8Q8NHQ8 419 aa8.33□□□□□ -1.08
LIN7C-202ENST00000524596 GOLGA6L10A0A0M3HER8 536 aa8.33□□□□□ -1.08
LIN7C-202ENST00000524596 ABCD1P33897 745 aa8.33□□□□□ -1.08
LIN7C-202ENST00000524596 MCM6Q14566 821 aa8.33□□□□□ -1.08
LIN7C-202ENST00000524596 TTC31Q49AM3 519 aaPredicted RBP8.33□□□□□ -1.08
LIN7C-202ENST00000524596 FAM114A1Q8IWE2 563 aa8.33□□□□□ -1.08
LIN7C-202ENST00000524596 DDX12PQ92771 950 aa8.33□□□□□ -1.08
LIN7C-202ENST00000524596 CCDC173Q0VFZ6 552 aa8.32□□□□□ -1.08
LIN7C-202ENST00000524596 TTLL5Q6EMB2 1281 aa8.32□□□□□ -1.08
LIN7C-202ENST00000524596 TRERF1Q96PN7 1200 aa8.32□□□□□ -1.08
LIN7C-202ENST00000524596 TCHPQ9BT92 498 aa8.32□□□□□ -1.08
LIN7C-202ENST00000524596 RMI1Q9H9A7 625 aa8.32□□□□□ -1.08
LIN7C-202ENST00000524596 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.32□□□□□ -1.08
LIN7C-202ENST00000524596 CCDC85AQ96PX6 553 aaPredicted RBP8.32□□□□□ -1.08
LIN7C-202ENST00000524596 TSPAN18Q96SJ8 248 aa8.32□□□□□ -1.08
LIN7C-202ENST00000524596 SPATS2LQ9NUQ6 558 aaKnown RBP8.32□□□□□ -1.08
LIN7C-202ENST00000524596 LEKR1Q6ZMV7 388 aa8.32□□□□□ -1.08
LIN7C-202ENST00000524596 RNF217Q8TC41 542 aa8.32□□□□□ -1.08
LIN7C-202ENST00000524596 MTA3Q9BTC8 594 aa8.32□□□□□ -1.08
LIN7C-202ENST00000524596 PSMC1P62191 440 aaKnown RBP8.31□□□□□ -1.08
LIN7C-202ENST00000524596 KCNA1Q09470 495 aa8.31□□□□□ -1.08
LIN7C-202ENST00000524596 ITFG2Q969R8 447 aa8.31□□□□□ -1.08
LIN7C-202ENST00000524596 MYO6Q9UM54 1294 aa8.31□□□□□ -1.08
LIN7C-202ENST00000524596 SRPK2P78362 688 aaKnown RBP8.31□□□□□ -1.08
LIN7C-202ENST00000524596 IRX5P78411 483 aaPredicted RBP8.31□□□□□ -1.08
LIN7C-202ENST00000524596 SF3A1Q15459 793 aaKnown RBP8.31□□□□□ -1.08
LIN7C-202ENST00000524596 NUTM1Q86Y26 1132 aa8.31□□□□□ -1.08
LIN7C-202ENST00000524596 PPME1Q9Y570 386 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms