RNA–Protein interactions for RNA: ENST00000524317.1

SCUBE2-208, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 2

Gene SCUBE2, Length 2,322 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-208ENST00000524317 AGLP35573 1532 aa15.66■□□□□ 0.1
SCUBE2-208ENST00000524317 NEXMIFQ5QGS0 1516 aa15.66■□□□□ 0.1
SCUBE2-208ENST00000524317 FBXO31Q5XUX0 539 aaPredicted RBP15.66■□□□□ 0.1
SCUBE2-208ENST00000524317 TSPOAP1O95153 1857 aa15.64■□□□□ 0.09
SCUBE2-208ENST00000524317 SMG6Q86US8 1419 aaKnown RBP15.64■□□□□ 0.09
SCUBE2-208ENST00000524317 SENP3-EIF4A1A0A087X0R7 540 aa15.63■□□□□ 0.09
SCUBE2-208ENST00000524317 ZFYVE9O95405 1425 aa15.63■□□□□ 0.09
SCUBE2-208ENST00000524317 MYO3AQ8NEV4 1616 aa15.63■□□□□ 0.09
SCUBE2-208ENST00000524317 CFAP65Q6ZU64 1925 aaKnown RBP15.63■□□□□ 0.09
SCUBE2-208ENST00000524317 NPC1L1Q9UHC9 1359 aa15.62■□□□□ 0.09
SCUBE2-208ENST00000524317 IRX6P78412 446 aaPredicted RBP15.61■□□□□ 0.09
SCUBE2-208ENST00000524317 NUDCQ9Y266 331 aa15.61■□□□□ 0.09
SCUBE2-208ENST00000524317 ASXL1Q8IXJ9 1541 aa15.61■□□□□ 0.09
SCUBE2-208ENST00000524317 ANO8Q9HCE9 1232 aaPredicted RBP15.61■□□□□ 0.09
SCUBE2-208ENST00000524317 MYOM1P52179 1685 aa15.6■□□□□ 0.09
SCUBE2-208ENST00000524317 PPP2R1AP30153 589 aa15.6■□□□□ 0.09
SCUBE2-208ENST00000524317 RBM19Q9Y4C8 960 aaKnown RBP15.6■□□□□ 0.09
SCUBE2-208ENST00000524317 KDM5AP29375 1690 aaKnown RBP15.6■□□□□ 0.09
SCUBE2-208ENST00000524317 PREX1Q8TCU6 1659 aa15.6■□□□□ 0.09
SCUBE2-208ENST00000524317 IGSF3O75054 1194 aa15.6■□□□□ 0.09
SCUBE2-208ENST00000524317 INSRP06213 1382 aa15.59■□□□□ 0.09
SCUBE2-208ENST00000524317 CARD14Q9BXL6 1004 aa15.59■□□□□ 0.09
SCUBE2-208ENST00000524317 PLEKHG5O94827 1062 aa15.59■□□□□ 0.09
SCUBE2-208ENST00000524317 MLECQ14165 292 aa15.59■□□□□ 0.09
SCUBE2-208ENST00000524317 TMEM131LA2VDJ0 1609 aa15.58■□□□□ 0.08
SCUBE2-208ENST00000524317 MAPK8IP2Q13387 824 aaPredicted RBP15.58■□□□□ 0.08
SCUBE2-208ENST00000524317 C1orf115Q9H7X2 142 aa15.57■□□□□ 0.08
SCUBE2-208ENST00000524317 CCDC9Q9Y3X0 531 aaKnown RBP15.57■□□□□ 0.08
SCUBE2-208ENST00000524317 ARHGEF40Q8TER5 1519 aa15.57■□□□□ 0.08
SCUBE2-208ENST00000524317 RNF216Q9NWF9 866 aaPredicted RBP15.57■□□□□ 0.08
SCUBE2-208ENST00000524317 ERICH6BQ5W0A0 696 aa15.56■□□□□ 0.08
SCUBE2-208ENST00000524317 NECTIN2Q92692 538 aa15.56■□□□□ 0.08
SCUBE2-208ENST00000524317 BLMP54132 1417 aaPredicted RBP15.56■□□□□ 0.08
SCUBE2-208ENST00000524317 STAG3Q9UJ98 1225 aa15.55■□□□□ 0.08
SCUBE2-208ENST00000524317 KIF13AQ9H1H9 1805 aa15.54■□□□□ 0.08
SCUBE2-208ENST00000524317 SLC12A5Q9H2X9 1139 aa15.54■□□□□ 0.08
SCUBE2-208ENST00000524317 PUS7Q96PZ0 661 aaKnown RBP15.53■□□□□ 0.08
SCUBE2-208ENST00000524317 ADAMTS8Q9UP79 889 aa15.53■□□□□ 0.08
SCUBE2-208ENST00000524317 SALL2Q9Y467 1007 aaPredicted RBP15.53■□□□□ 0.08
SCUBE2-208ENST00000524317 SPATA31D1Q6ZQQ2 1576 aa15.53■□□□□ 0.08
SCUBE2-208ENST00000524317 EVC2Q86UK5 1308 aa15.52■□□□□ 0.08
SCUBE2-208ENST00000524317 QRICH2Q9H0J4 1663 aa15.52■□□□□ 0.08
SCUBE2-208ENST00000524317 RNF123Q5XPI4 1314 aa15.52■□□□□ 0.07
SCUBE2-208ENST00000524317 STK26Q9P289 416 aa15.52■□□□□ 0.07
SCUBE2-208ENST00000524317 A2ML1A8K2U0 1454 aa15.51■□□□□ 0.07
SCUBE2-208ENST00000524317 PDE3BQ13370 1112 aa15.51■□□□□ 0.07
SCUBE2-208ENST00000524317 PROM2Q8N271 834 aa15.51■□□□□ 0.07
SCUBE2-208ENST00000524317 CLTCQ00610 1675 aaKnown RBP15.51■□□□□ 0.07
SCUBE2-208ENST00000524317 UBE2Q2Q8WVN8 375 aa15.5■□□□□ 0.07
SCUBE2-208ENST00000524317 TULP4Q9NRJ4 1543 aa15.5■□□□□ 0.07
SCUBE2-208ENST00000524317 NSD3Q9BZ95 1437 aa15.5■□□□□ 0.07
SCUBE2-208ENST00000524317 ZMYM3Q14202 1370 aa15.5■□□□□ 0.07
SCUBE2-208ENST00000524317 SAFB2Q14151 953 aaKnown RBP eCLIP15.5■□□□□ 0.07
SCUBE2-208ENST00000524317 WDR43Q15061 677 aaKnown RBP eCLIP15.5■□□□□ 0.07
SCUBE2-208ENST00000524317 SPDYE4A6NLX3 237 aa15.49■□□□□ 0.07
SCUBE2-208ENST00000524317 ESF1Q9H501 851 aaKnown RBP15.49■□□□□ 0.07
SCUBE2-208ENST00000524317 YTHDC2Q9H6S0 1430 aaKnown RBP15.49■□□□□ 0.07
SCUBE2-208ENST00000524317 PPP4R2Q9NY27 417 aa15.49■□□□□ 0.07
SCUBE2-208ENST00000524317 CABP2Q9NPB3 220 aa15.48■□□□□ 0.07
SCUBE2-208ENST00000524317 ARHGEF28Q8N1W1 1705 aaKnown RBP15.48■□□□□ 0.07
SCUBE2-208ENST00000524317 PTPRMP28827 1452 aa15.48■□□□□ 0.07
SCUBE2-208ENST00000524317 MSH5O43196 834 aa15.48■□□□□ 0.07
SCUBE2-208ENST00000524317 PRAM1Q96QH2 718 aa15.48■□□□□ 0.07
SCUBE2-208ENST00000524317 RIMS2Q9UQ26 1411 aa15.47■□□□□ 0.07
SCUBE2-208ENST00000524317 ALKQ9UM73 1620 aa15.46■□□□□ 0.07
SCUBE2-208ENST00000524317 MYO5BQ9ULV0 1848 aa15.46■□□□□ 0.07
SCUBE2-208ENST00000524317 CDCA7LQ96GN5 454 aa15.45■□□□□ 0.06
SCUBE2-208ENST00000524317 ANKRD36BQ8N2N9 1353 aa15.45■□□□□ 0.06
SCUBE2-208ENST00000524317 DEKP35659 375 aaKnown RBP15.45■□□□□ 0.06
SCUBE2-208ENST00000524317 POGKQ9P215 609 aa15.45■□□□□ 0.06
SCUBE2-208ENST00000524317 NEUROD2Q15784 382 aa15.44■□□□□ 0.06
SCUBE2-208ENST00000524317 ZMYND15Q9H091 742 aa15.44■□□□□ 0.06
SCUBE2-208ENST00000524317 MORC1Q86VD1 984 aa15.44■□□□□ 0.06
SCUBE2-208ENST00000524317 CGNL1Q0VF96 1302 aa15.44■□□□□ 0.06
SCUBE2-208ENST00000524317 SRPK2P78362 688 aaKnown RBP15.43■□□□□ 0.06
SCUBE2-208ENST00000524317 MINK1Q8N4C8 1332 aaPredicted RBP15.43■□□□□ 0.06
SCUBE2-208ENST00000524317 FANCIQ9NVI1 1328 aa15.42■□□□□ 0.06
SCUBE2-208ENST00000524317 NINLQ9Y2I6 1382 aa15.42■□□□□ 0.06
SCUBE2-208ENST00000524317 RCAN3Q9UKA8 241 aa15.42■□□□□ 0.06
SCUBE2-208ENST00000524317 POLR3AO14802 1390 aaPredicted RBP15.41■□□□□ 0.06
SCUBE2-208ENST00000524317 TNRQ92752 1358 aa15.41■□□□□ 0.06
SCUBE2-208ENST00000524317 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.41■□□□□ 0.06
SCUBE2-208ENST00000524317 ATAD2Q6PL18 1390 aa15.41■□□□□ 0.06
SCUBE2-208ENST00000524317 PLEKHH1Q9ULM0 1364 aa15.41■□□□□ 0.06
SCUBE2-208ENST00000524317 TNNT2P45379 298 aaPredicted RBP15.4■□□□□ 0.06
SCUBE2-208ENST00000524317 B4GALNT3Q6L9W6 998 aa15.39■□□□□ 0.05
SCUBE2-208ENST00000524317 RSPH6AQ9H0K4 717 aa15.39■□□□□ 0.05
SCUBE2-208ENST00000524317 ZNF521Q96K83 1311 aa15.39■□□□□ 0.05
SCUBE2-208ENST00000524317 A0A1W2PP64 1363 aa15.39■□□□□ 0.05
SCUBE2-208ENST00000524317 ZBTB7CA1YPR0 619 aa15.39■□□□□ 0.05
SCUBE2-208ENST00000524317 RRP1P56182 461 aaKnown RBP15.39■□□□□ 0.05
SCUBE2-208ENST00000524317 CCDC146Q8IYE0 955 aa15.39■□□□□ 0.05
SCUBE2-208ENST00000524317 NSD2O96028 1365 aa15.39■□□□□ 0.05
SCUBE2-208ENST00000524317 USP32Q8NFA0 1604 aa15.39■□□□□ 0.05
SCUBE2-208ENST00000524317 ABCC11Q96J66 1382 aa15.38■□□□□ 0.05
SCUBE2-208ENST00000524317 CDK19Q9BWU1 502 aa15.38■□□□□ 0.05
SCUBE2-208ENST00000524317 WAPLQ7Z5K2 1190 aa15.37■□□□□ 0.05
SCUBE2-208ENST00000524317 DLC1Q96QB1 1528 aa15.37■□□□□ 0.05
SCUBE2-208ENST00000524317 METP08581 1390 aa15.36■□□□□ 0.05
SCUBE2-208ENST00000524317 HDGFP51858 240 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms