RNA–Protein interactions for RNA: ENST00000524238.3

HMBOX1-211, Transcript of homeobox containing 1, humanhuman

TSL 2 BASIC

Gene HMBOX1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-211ENST00000524238 SNX21Q969T3 373 aa9.48□□□□□ -0.89
HMBOX1-211ENST00000524238 ATP10BO94823 1461 aa9.48□□□□□ -0.89
HMBOX1-211ENST00000524238 IBTKQ9P2D0 1353 aaPredicted RBP9.48□□□□□ -0.89
HMBOX1-211ENST00000524238 CDC42BPBQ9Y5S2 1711 aa9.48□□□□□ -0.89
HMBOX1-211ENST00000524238 NEURL4Q96JN8 1562 aa9.48□□□□□ -0.89
HMBOX1-211ENST00000524238 GOLGA6L22H0YM25 854 aa9.48□□□□□ -0.89
HMBOX1-211ENST00000524238 CCDC27Q2M243 656 aa9.48□□□□□ -0.89
HMBOX1-211ENST00000524238 WWC1Q8IX03 1113 aa9.48□□□□□ -0.89
HMBOX1-211ENST00000524238 SHROOM2Q13796 1616 aa9.47□□□□□ -0.89
HMBOX1-211ENST00000524238 HNRNPMP52272 730 aaKnown RBP eCLIP9.47□□□□□ -0.89
HMBOX1-211ENST00000524238 RARSP54136 660 aaKnown RBP9.47□□□□□ -0.89
HMBOX1-211ENST00000524238 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.47□□□□□ -0.89
HMBOX1-211ENST00000524238 MTERF4Q7Z6M4 381 aaKnown RBP9.47□□□□□ -0.89
HMBOX1-211ENST00000524238 CCDC146Q8IYE0 955 aa9.47□□□□□ -0.89
HMBOX1-211ENST00000524238 PANK1Q8TE04 598 aa9.47□□□□□ -0.89
HMBOX1-211ENST00000524238 PANK2Q9BZ23 570 aa9.47□□□□□ -0.89
HMBOX1-211ENST00000524238 GZF1Q9H116 711 aaPredicted RBP9.47□□□□□ -0.89
HMBOX1-211ENST00000524238 CEP152O94986 1710 aa9.47□□□□□ -0.89
HMBOX1-211ENST00000524238 HS1BP3Q53T59 392 aa9.46□□□□□ -0.89
HMBOX1-211ENST00000524238 SPINK5Q9NQ38 1064 aaPredicted RBP9.46□□□□□ -0.89
HMBOX1-211ENST00000524238 SMC5Q8IY18 1101 aa9.45□□□□□ -0.9
HMBOX1-211ENST00000524238 RUNDC1Q96C34 613 aa9.45□□□□□ -0.9
HMBOX1-211ENST00000524238 CFAP44Q96MT7 982 aa9.45□□□□□ -0.9
HMBOX1-211ENST00000524238 KIF16BQ96L93 1317 aa9.45□□□□□ -0.9
HMBOX1-211ENST00000524238 RTEL1-TNFRSF6BF6WH68 1400 aa9.45□□□□□ -0.9
HMBOX1-211ENST00000524238 MSNP26038 577 aaKnown RBP9.45□□□□□ -0.9
HMBOX1-211ENST00000524238 HDAC1Q13547 482 aaPredicted RBP9.45□□□□□ -0.9
HMBOX1-211ENST00000524238 TRPM2O94759 1503 aa9.44□□□□□ -0.9
HMBOX1-211ENST00000524238 RBM25P49756 843 aaKnown RBP9.44□□□□□ -0.9
HMBOX1-211ENST00000524238 CALD1Q05682 793 aaKnown RBP9.44□□□□□ -0.9
HMBOX1-211ENST00000524238 MVPQ14764 893 aaKnown RBP9.44□□□□□ -0.9
HMBOX1-211ENST00000524238 ZSCAN30Q86W11 494 aa9.44□□□□□ -0.9
HMBOX1-211ENST00000524238 ARXQ96QS3 562 aa9.44□□□□□ -0.9
HMBOX1-211ENST00000524238 PPP1R9BQ96SB3 815 aa9.44□□□□□ -0.9
HMBOX1-211ENST00000524238 ADGRL1O94910 1474 aa9.44□□□□□ -0.9
HMBOX1-211ENST00000524238 DDIT3P35638 169 aa9.43□□□□□ -0.9
HMBOX1-211ENST00000524238 ZKSCAN2Q63HK3 967 aa9.43□□□□□ -0.9
HMBOX1-211ENST00000524238 DDX19BQ9UMR2 479 aa9.43□□□□□ -0.9
HMBOX1-211ENST00000524238 PCDHB15Q9Y5E8 787 aa9.43□□□□□ -0.9
HMBOX1-211ENST00000524238 SYCP2Q9BX26 1530 aa9.43□□□□□ -0.9
HMBOX1-211ENST00000524238 OFD1O75665 1012 aa9.42□□□□□ -0.9
HMBOX1-211ENST00000524238 HSP90AB1P08238 724 aaKnown RBP9.42□□□□□ -0.9
HMBOX1-211ENST00000524238 MFAP1P55081 439 aaKnown RBP9.42□□□□□ -0.9
HMBOX1-211ENST00000524238 RAB3GAP1Q15042 981 aa9.42□□□□□ -0.9
HMBOX1-211ENST00000524238 IQSEC2Q5JU85 1478 aa9.42□□□□□ -0.9
HMBOX1-211ENST00000524238 FTSJ3Q8IY81 847 aaKnown RBP9.42□□□□□ -0.9
HMBOX1-211ENST00000524238 ZNF692Q9BU19 519 aaPredicted RBP9.42□□□□□ -0.9
HMBOX1-211ENST00000524238 CHMP4BQ9H444 224 aaKnown RBP9.42□□□□□ -0.9
HMBOX1-211ENST00000524238 SBNO2Q9Y2G9 1366 aa9.42□□□□□ -0.9
HMBOX1-211ENST00000524238 SHPRHQ149N8 1683 aa9.42□□□□□ -0.9
HMBOX1-211ENST00000524238 REREQ9P2R6 1566 aa9.42□□□□□ -0.9
HMBOX1-211ENST00000524238 CLEC17AQ6ZS10 378 aa9.42□□□□□ -0.9
HMBOX1-211ENST00000524238 DZIP1LQ8IYY4 767 aaKnown RBP9.42□□□□□ -0.9
HMBOX1-211ENST00000524238 CHMP7Q8WUX9 453 aaPredicted RBP9.42□□□□□ -0.9
HMBOX1-211ENST00000524238 JPH4Q96JJ6 628 aa9.42□□□□□ -0.9
HMBOX1-211ENST00000524238 CFAP53Q96M91 514 aa9.42□□□□□ -0.9
HMBOX1-211ENST00000524238 MYO3AQ8NEV4 1616 aa9.41□□□□□ -0.9
HMBOX1-211ENST00000524238 USP32Q8NFA0 1604 aa9.41□□□□□ -0.9
HMBOX1-211ENST00000524238 ARHGAP5Q13017 1502 aa9.41□□□□□ -0.9
HMBOX1-211ENST00000524238 ERCC6Q03468 1493 aa9.41□□□□□ -0.9
HMBOX1-211ENST00000524238 KIAA1211Q6ZU35 1233 aa9.41□□□□□ -0.9
HMBOX1-211ENST00000524238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.41□□□□□ -0.91e-10■□□□□ 10.8
HMBOX1-211ENST00000524238 ARHGAP31Q2M1Z3 1444 aa9.4□□□□□ -0.9
HMBOX1-211ENST00000524238 NASPP49321 788 aaPredicted RBP9.4□□□□□ -0.9
HMBOX1-211ENST00000524238 CSPP1Q1MSJ5 1256 aa9.4□□□□□ -0.9
HMBOX1-211ENST00000524238 SPRYD3Q8NCJ5 442 aa9.4□□□□□ -0.9
HMBOX1-211ENST00000524238 TNPO1Q92973 898 aaKnown RBP9.4□□□□□ -0.9
HMBOX1-211ENST00000524238 MCM5P33992 734 aa9.39□□□□□ -0.91
HMBOX1-211ENST00000524238 KLHL40Q2TBA0 621 aa9.39□□□□□ -0.91
HMBOX1-211ENST00000524238 MYOM2P54296 1465 aa9.39□□□□□ -0.91
HMBOX1-211ENST00000524238 PTPRTO14522 1441 aa9.39□□□□□ -0.91
HMBOX1-211ENST00000524238 ERBB4Q15303 1308 aa9.39□□□□□ -0.91
HMBOX1-211ENST00000524238 ERVK-7P63135 1459 aa9.39□□□□□ -0.91
HMBOX1-211ENST00000524238 TCP11L2Q8N4U5 519 aa9.38□□□□□ -0.91
HMBOX1-211ENST00000524238 MAP3K4Q9Y6R4 1608 aa9.38□□□□□ -0.91
HMBOX1-211ENST00000524238 NSD2O96028 1365 aa9.38□□□□□ -0.91
HMBOX1-211ENST00000524238 TET3O43151 1660 aa9.37□□□□□ -0.91
HMBOX1-211ENST00000524238 K7ELQ4 463 aaPredicted RBP9.37□□□□□ -0.91
HMBOX1-211ENST00000524238 IPO8O15397 1037 aaKnown RBP9.37□□□□□ -0.91
HMBOX1-211ENST00000524238 RLBP1P12271 317 aa9.37□□□□□ -0.91
HMBOX1-211ENST00000524238 MORC1Q86VD1 984 aa9.37□□□□□ -0.91
HMBOX1-211ENST00000524238 DMRT2Q9Y5R5 561 aa9.37□□□□□ -0.91
HMBOX1-211ENST00000524238 ADGRB2O60241 1585 aa9.37□□□□□ -0.91
HMBOX1-211ENST00000524238 ABCC11Q96J66 1382 aa9.37□□□□□ -0.91
HMBOX1-211ENST00000524238 ZNF500O60304 480 aaPredicted RBP9.36□□□□□ -0.91
HMBOX1-211ENST00000524238 ZNF445P59923 1031 aa9.36□□□□□ -0.91
HMBOX1-211ENST00000524238 NUCB2P80303 420 aa9.36□□□□□ -0.91
HMBOX1-211ENST00000524238 BMP2KLQ5H9B9 411 aa9.36□□□□□ -0.91
HMBOX1-211ENST00000524238 IL16Q14005 1332 aa9.36□□□□□ -0.91
HMBOX1-211ENST00000524238 CFAP74Q9C0B2 1584 aa9.36□□□□□ -0.91
HMBOX1-211ENST00000524238 DYNC1I1O14576 645 aa9.36□□□□□ -0.91
HMBOX1-211ENST00000524238 DDX49Q9Y6V7 483 aaKnown RBP9.36□□□□□ -0.91
HMBOX1-211ENST00000524238 CLTCL1P53675 1640 aa9.35□□□□□ -0.91
HMBOX1-211ENST00000524238 ZNF518AQ6AHZ1 1483 aa9.35□□□□□ -0.91
HMBOX1-211ENST00000524238 SETBP1Q9Y6X0 1596 aa9.35□□□□□ -0.91
HMBOX1-211ENST00000524238 NUCB1Q02818 461 aa9.35□□□□□ -0.91
HMBOX1-211ENST00000524238 GAS2L3Q86XJ1 694 aa9.35□□□□□ -0.91
HMBOX1-211ENST00000524238 SMAP1Q8IYB5 467 aaPredicted RBP9.35□□□□□ -0.91
HMBOX1-211ENST00000524238 NOL7Q9UMY1 257 aaKnown RBP9.35□□□□□ -0.91
HMBOX1-211ENST00000524238 DEPDC5O75140 1603 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms