RNA–Protein interactions for RNA: ENST00000523514.1

FAM49B-227, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-227ENST00000523514 ILDR1Q86SU0 546 aaPredicted RBP11.27□□□□□ -0.61
FAM49B-227ENST00000523514 MIER1Q8N108 512 aa11.27□□□□□ -0.61
FAM49B-227ENST00000523514 STAC3Q96MF2 364 aa11.27□□□□□ -0.61
FAM49B-227ENST00000523514 TMEM94Q12767 1356 aa11.27□□□□□ -0.61
FAM49B-227ENST00000523514 NRXN1Q9ULB1 1477 aa11.26□□□□□ -0.61
FAM49B-227ENST00000523514 UBAP1LF5GYI3 381 aa11.26□□□□□ -0.61
FAM49B-227ENST00000523514 TOM1O60784 492 aa11.26□□□□□ -0.61
FAM49B-227ENST00000523514 PROSER2Q86WR7 435 aaPredicted RBP11.26□□□□□ -0.61
FAM49B-227ENST00000523514 KLHL34Q8N239 644 aa11.26□□□□□ -0.61
FAM49B-227ENST00000523514 SPOCK2Q92563 424 aa11.26□□□□□ -0.61
FAM49B-227ENST00000523514 PRAG1Q86YV5 1406 aa11.26□□□□□ -0.61
FAM49B-227ENST00000523514 PIP4P2Q8N4L2 257 aa11.25□□□□□ -0.61
FAM49B-227ENST00000523514 CLEC11AQ9Y240 323 aa11.25□□□□□ -0.61
FAM49B-227ENST00000523514 METP08581 1390 aa11.25□□□□□ -0.61
FAM49B-227ENST00000523514 DHX57Q6P158 1386 aaKnown RBP11.25□□□□□ -0.61
FAM49B-227ENST00000523514 PTCH1Q13635 1447 aa11.25□□□□□ -0.61
FAM49B-227ENST00000523514 PTPRUQ92729 1446 aa11.25□□□□□ -0.61
FAM49B-227ENST00000523514 FXR2P51116 673 aaKnown RBP eCLIP11.24□□□□□ -0.61
FAM49B-227ENST00000523514 AMOTL2Q9Y2J4 779 aa11.24□□□□□ -0.61
FAM49B-227ENST00000523514 ADGRF5Q8IZF2 1346 aa11.24□□□□□ -0.61
FAM49B-227ENST00000523514 MSH6P52701 1360 aa11.23□□□□□ -0.61
FAM49B-227ENST00000523514 KNDC1Q76NI1 1749 aa11.23□□□□□ -0.61
FAM49B-227ENST00000523514 DCCP43146 1447 aa11.21□□□□□ -0.61
FAM49B-227ENST00000523514 ASXL1Q8IXJ9 1541 aa11.2□□□□□ -0.62
FAM49B-227ENST00000523514 TECPR2O15040 1411 aa11.2□□□□□ -0.62
FAM49B-227ENST00000523514 C14orf37Q86TY3 774 aa11.2□□□□□ -0.62
FAM49B-227ENST00000523514 DCAF11Q8TEB1 546 aa11.2□□□□□ -0.62
FAM49B-227ENST00000523514 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.2□□□□□ -0.62
FAM49B-227ENST00000523514 KIAA1210Q9ULL0 1709 aa11.2□□□□□ -0.62
FAM49B-227ENST00000523514 LRPPRCP42704 1394 aaKnown RBP11.19□□□□□ -0.62
FAM49B-227ENST00000523514 C14orf93Q9H972 538 aaKnown RBP11.19□□□□□ -0.62
FAM49B-227ENST00000523514 YTHDC2Q9H6S0 1430 aaKnown RBP11.18□□□□□ -0.62
FAM49B-227ENST00000523514 ADGRL3Q9HAR2 1447 aa11.18□□□□□ -0.62
FAM49B-227ENST00000523514 NALCNQ8IZF0 1738 aa11.18□□□□□ -0.62
FAM49B-227ENST00000523514 C19orf44Q9H6X5 657 aa11.18□□□□□ -0.62
FAM49B-227ENST00000523514 ABCC11Q96J66 1382 aa11.17□□□□□ -0.62
FAM49B-227ENST00000523514 CADPS2Q86UW7 1296 aa11.17□□□□□ -0.62
FAM49B-227ENST00000523514 RBM33Q96EV2 1170 aaKnown RBP11.17□□□□□ -0.62
FAM49B-227ENST00000523514 KDM2AQ9Y2K7 1162 aa11.17□□□□□ -0.62
FAM49B-227ENST00000523514 ROBO2Q9HCK4 1378 aa11.16□□□□□ -0.62
FAM49B-227ENST00000523514 ADGRB1O14514 1584 aa11.16□□□□□ -0.62
FAM49B-227ENST00000523514 DLC1Q96QB1 1528 aa11.16□□□□□ -0.62
FAM49B-227ENST00000523514 ATF3P18847 181 aa11.16□□□□□ -0.62
FAM49B-227ENST00000523514 PIP4K2BP78356 416 aa11.16□□□□□ -0.62
FAM49B-227ENST00000523514 CFAP70Q5T0N1 1121 aa11.16□□□□□ -0.62
FAM49B-227ENST00000523514 PCGF6Q9BYE7 350 aa11.16□□□□□ -0.62
FAM49B-227ENST00000523514 FAM135BQ49AJ0 1406 aa11.16□□□□□ -0.62
FAM49B-227ENST00000523514 ROBO1Q9Y6N7 1651 aa11.15□□□□□ -0.62
FAM49B-227ENST00000523514 SIRT1Q96EB6 747 aa11.15□□□□□ -0.62
FAM49B-227ENST00000523514 CDC42BPGQ6DT37 1551 aa11.15□□□□□ -0.62
FAM49B-227ENST00000523514 TMEM132EQ6IEE7 984 aa11.14□□□□□ -0.63
FAM49B-227ENST00000523514 SIN3AQ96ST3 1273 aa11.14□□□□□ -0.63
FAM49B-227ENST00000523514 CLSPNQ9HAW4 1339 aa11.13□□□□□ -0.63
FAM49B-227ENST00000523514 PLEKHG5O94827 1062 aa11.13□□□□□ -0.63
FAM49B-227ENST00000523514 NEUROD1Q13562 356 aa11.13□□□□□ -0.63
FAM49B-227ENST00000523514 SLAIN2Q9P270 581 aa11.13□□□□□ -0.63
FAM49B-227ENST00000523514 STK26Q9P289 416 aa11.13□□□□□ -0.63
FAM49B-227ENST00000523514 ZBTB47Q9UFB7 747 aaPredicted RBP11.13□□□□□ -0.63
FAM49B-227ENST00000523514 TONSLQ96HA7 1378 aa11.13□□□□□ -0.63
FAM49B-227ENST00000523514 L3MBTL2Q969R5 705 aa11.12□□□□□ -0.63
FAM49B-227ENST00000523514 CREBZFQ9NS37 354 aa11.12□□□□□ -0.63
FAM49B-227ENST00000523514 MST1RQ04912 1400 aa11.11□□□□□ -0.63
FAM49B-227ENST00000523514 PRR29P0C7W0 189 aa11.11□□□□□ -0.63
FAM49B-227ENST00000523514 ARHGEF28Q8N1W1 1705 aaKnown RBP11.11□□□□□ -0.63
FAM49B-227ENST00000523514 TRPM1Q7Z4N2 1603 aa11.1□□□□□ -0.63
FAM49B-227ENST00000523514 HSPA1LP34931 641 aa11.1□□□□□ -0.63
FAM49B-227ENST00000523514 PLCB2Q00722 1185 aa11.1□□□□□ -0.63
FAM49B-227ENST00000523514 ADGRB2O60241 1585 aa11.1□□□□□ -0.63
FAM49B-227ENST00000523514 PHLPP1O60346 1717 aa11.09□□□□□ -0.63
FAM49B-227ENST00000523514 FMN2Q9NZ56 1722 aa11.09□□□□□ -0.63
FAM49B-227ENST00000523514 AHDC1Q5TGY3 1603 aaPredicted RBP11.09□□□□□ -0.63
FAM49B-227ENST00000523514 C1orf167Q5SNV9 1468 aa11.08□□□□□ -0.64
FAM49B-227ENST00000523514 PLEKHH1Q9ULM0 1364 aa11.08□□□□□ -0.64
FAM49B-227ENST00000523514 PRKAR2AP13861 404 aaKnown RBP11.08□□□□□ -0.64
FAM49B-227ENST00000523514 MNX1P50219 401 aaPredicted RBP11.08□□□□□ -0.64
FAM49B-227ENST00000523514 WAPLQ7Z5K2 1190 aa11.08□□□□□ -0.64
FAM49B-227ENST00000523514 PRAM1Q96QH2 718 aa11.08□□□□□ -0.64
FAM49B-227ENST00000523514 POGKQ9P215 609 aa11.08□□□□□ -0.64
FAM49B-227ENST00000523514 NHSL1Q5SYE7 1610 aa11.07□□□□□ -0.64
FAM49B-227ENST00000523514 TRAK1Q9UPV9 953 aa11.07□□□□□ -0.64
FAM49B-227ENST00000523514 EIF3AQ14152 1382 aaKnown RBP11.06□□□□□ -0.64
FAM49B-227ENST00000523514 BRINP3Q76B58 766 aa11.06□□□□□ -0.64
FAM49B-227ENST00000523514 COL16A1Q07092 1604 aaPredicted RBP11.06□□□□□ -0.64
FAM49B-227ENST00000523514 ROCK2O75116 1388 aaKnown RBP11.05□□□□□ -0.64
FAM49B-227ENST00000523514 KIF1AQ12756 1690 aa11.05□□□□□ -0.64
FAM49B-227ENST00000523514 ECM2O94769 699 aaPredicted RBP11.05□□□□□ -0.64
FAM49B-227ENST00000523514 CHADLQ6NUI6 762 aa11.05□□□□□ -0.64
FAM49B-227ENST00000523514 TIMELESSQ9UNS1 1208 aa11.05□□□□□ -0.64
FAM49B-227ENST00000523514 RALGAPBQ86X10 1494 aa11.05□□□□□ -0.64
FAM49B-227ENST00000523514 GPRASP1Q5JY77 1395 aa11.04□□□□□ -0.64
FAM49B-227ENST00000523514 ANKARQ7Z5J8 1434 aa11.04□□□□□ -0.64
FAM49B-227ENST00000523514 NUBP1P53384 320 aa11.04□□□□□ -0.64
FAM49B-227ENST00000523514 NBPF1Q3BBV0 1214 aa11.04□□□□□ -0.64
FAM49B-227ENST00000523514 SAFB2Q14151 953 aaKnown RBP eCLIP11.03□□□□□ -0.64
FAM49B-227ENST00000523514 QRICH2Q9H0J4 1663 aa11.03□□□□□ -0.64
FAM49B-227ENST00000523514 SHPRHQ149N8 1683 aa11.02□□□□□ -0.64
FAM49B-227ENST00000523514 ITSN1Q15811 1721 aa11.02□□□□□ -0.65
FAM49B-227ENST00000523514 CCER1Q8TC90 406 aaPredicted RBP11.02□□□□□ -0.65
FAM49B-227ENST00000523514 TULP4Q9NRJ4 1543 aa11.02□□□□□ -0.65
FAM49B-227ENST00000523514 CENPJQ9HC77 1338 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms