RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 CPS1P31327 1500 aa21.11■□□□□ 0.97
CTNNA1-236ENST00000522792 TECPR2O15040 1411 aa21.11■□□□□ 0.97
CTNNA1-236ENST00000522792 ANKLE2Q86XL3 938 aa21.11■□□□□ 0.97
CTNNA1-236ENST00000522792 SRPK2P78362 688 aaKnown RBP21.1■□□□□ 0.97
CTNNA1-236ENST00000522792 PTPRUQ92729 1446 aa21.1■□□□□ 0.97
CTNNA1-236ENST00000522792 KTN1Q86UP2 1357 aaKnown RBP21.09■□□□□ 0.97
CTNNA1-236ENST00000522792 CC2D1BQ5T0F9 858 aaKnown RBP21.09■□□□□ 0.97
CTNNA1-236ENST00000522792 TBX22Q9Y458 520 aa21.09■□□□□ 0.97
CTNNA1-236ENST00000522792 DIP2AQ14689 1571 aa21.09■□□□□ 0.97
CTNNA1-236ENST00000522792 ROBO2Q9HCK4 1378 aa21.08■□□□□ 0.97
CTNNA1-236ENST00000522792 SLC12A5Q9H2X9 1139 aa21.08■□□□□ 0.97
CTNNA1-236ENST00000522792 KNSTRNQ9Y448 316 aa21.08■□□□□ 0.97
CTNNA1-236ENST00000522792 FAM135BQ49AJ0 1406 aa21.08■□□□□ 0.96
CTNNA1-236ENST00000522792 PUS7Q96PZ0 661 aaKnown RBP21.07■□□□□ 0.96
CTNNA1-236ENST00000522792 CDK19Q9BWU1 502 aa21.06■□□□□ 0.96
CTNNA1-236ENST00000522792 MRS2Q9HD23 443 aa21.06■□□□□ 0.96
CTNNA1-236ENST00000522792 RALBP1Q15311 655 aa21.05■□□□□ 0.96
CTNNA1-236ENST00000522792 SIRT1Q96EB6 747 aa21.05■□□□□ 0.96
CTNNA1-236ENST00000522792 AMOTL2Q9Y2J4 779 aa21.05■□□□□ 0.96
CTNNA1-236ENST00000522792 PARD3Q8TEW0 1356 aa21.05■□□□□ 0.96
CTNNA1-236ENST00000522792 KDM4FA0A1W2PPD8 638 aa21.04■□□□□ 0.96
CTNNA1-236ENST00000522792 CARD14Q9BXL6 1004 aa21.04■□□□□ 0.96
CTNNA1-236ENST00000522792 MYBBP1AQ9BQG0 1328 aaKnown RBP21.02■□□□□ 0.96
CTNNA1-236ENST00000522792 CENPBP07199 599 aaPredicted RBP21.02■□□□□ 0.96
CTNNA1-236ENST00000522792 AMER1Q5JTC6 1135 aaPredicted RBP21.02■□□□□ 0.96
CTNNA1-236ENST00000522792 ATAD2Q6PL18 1390 aa21.02■□□□□ 0.96
CTNNA1-236ENST00000522792 NCKAP5LQ9HCH0 1330 aa21■□□□□ 0.95
CTNNA1-236ENST00000522792 NSD3Q9BZ95 1437 aa21■□□□□ 0.95
CTNNA1-236ENST00000522792 XRN1Q8IZH2 1706 aaKnown RBP20.99■□□□□ 0.95
CTNNA1-236ENST00000522792 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.99■□□□□ 0.95
CTNNA1-236ENST00000522792 WASLO00401 505 aaPredicted RBP20.99■□□□□ 0.95
CTNNA1-236ENST00000522792 PIAS4Q8N2W9 510 aaPredicted RBP20.99■□□□□ 0.95
CTNNA1-236ENST00000522792 NPHP4O75161 1426 aaPredicted RBP20.99■□□□□ 0.95
CTNNA1-236ENST00000522792 ANKRD36BQ8N2N9 1353 aa20.98■□□□□ 0.95
CTNNA1-236ENST00000522792 PTCH1Q13635 1447 aa20.97■□□□□ 0.95
CTNNA1-236ENST00000522792 NINLQ9Y2I6 1382 aa20.97■□□□□ 0.95
CTNNA1-236ENST00000522792 FAM9BQ8IZU0 186 aa20.97■□□□□ 0.95
CTNNA1-236ENST00000522792 PIK3R4Q99570 1358 aa20.97■□□□□ 0.95
CTNNA1-236ENST00000522792 KCNA6P17658 529 aa20.96■□□□□ 0.95
CTNNA1-236ENST00000522792 A0A1W2PP64 1363 aa20.95■□□□□ 0.94
CTNNA1-236ENST00000522792 NPC1L1Q9UHC9 1359 aa20.95■□□□□ 0.94
CTNNA1-236ENST00000522792 CABP1Q9NZU7 370 aa20.95■□□□□ 0.94
CTNNA1-236ENST00000522792 ADGRB2O60241 1585 aa20.94■□□□□ 0.94
CTNNA1-236ENST00000522792 BRD4O60885 1362 aaPredicted RBP20.94■□□□□ 0.94
CTNNA1-236ENST00000522792 NLRP13Q86W25 1043 aa20.94■□□□□ 0.94
CTNNA1-236ENST00000522792 CD163L1Q9NR16 1453 aa20.93■□□□□ 0.94
CTNNA1-236ENST00000522792 CHD2O14647 1828 aaKnown RBP20.93■□□□□ 0.94
CTNNA1-236ENST00000522792 HSPA2P54652 639 aa20.92■□□□□ 0.94
CTNNA1-236ENST00000522792 NUDT16Q96DE0 195 aaKnown RBP20.91■□□□□ 0.94
CTNNA1-236ENST00000522792 TERF2IPQ9NYB0 399 aa20.91■□□□□ 0.94
CTNNA1-236ENST00000522792 USP32Q8NFA0 1604 aa20.91■□□□□ 0.94
CTNNA1-236ENST00000522792 PPIP5K1Q6PFW1 1433 aa20.9■□□□□ 0.94
CTNNA1-236ENST00000522792 NUTM2FA1L443 756 aa20.89■□□□□ 0.93
CTNNA1-236ENST00000522792 PPP2R1AP30153 589 aa20.89■□□□□ 0.93
CTNNA1-236ENST00000522792 HDGFL2Q7Z4V5 671 aaPredicted RBP20.89■□□□□ 0.93
CTNNA1-236ENST00000522792 PRR36Q9H6K5 1346 aa20.89■□□□□ 0.93
CTNNA1-236ENST00000522792 CGNL1Q0VF96 1302 aa20.88■□□□□ 0.93
CTNNA1-236ENST00000522792 ATP7BP35670 1465 aa20.88■□□□□ 0.93
CTNNA1-236ENST00000522792 PNISRQ8TF01 805 aaKnown RBP20.87■□□□□ 0.93
CTNNA1-236ENST00000522792 HNRNPUQ00839 825 aaKnown RBP eCLIP20.86■□□□□ 0.93
CTNNA1-236ENST00000522792 RBM33Q96EV2 1170 aaKnown RBP20.86■□□□□ 0.93
CTNNA1-236ENST00000522792 CCDC61Q9Y6R9 512 aa20.86■□□□□ 0.93
CTNNA1-236ENST00000522792 LMTK3Q96Q04 1460 aa20.85■□□□□ 0.93
CTNNA1-236ENST00000522792 MORC1Q86VD1 984 aa20.85■□□□□ 0.93
CTNNA1-236ENST00000522792 TNNT2P45379 298 aaPredicted RBP20.83■□□□□ 0.92
CTNNA1-236ENST00000522792 CDC42BPGQ6DT37 1551 aa20.83■□□□□ 0.92
CTNNA1-236ENST00000522792 TOPAZ1Q8N9V7 1692 aa20.82■□□□□ 0.92
CTNNA1-236ENST00000522792 NALCNQ8IZF0 1738 aa20.82■□□□□ 0.92
CTNNA1-236ENST00000522792 NSD2O96028 1365 aa20.81■□□□□ 0.92
CTNNA1-236ENST00000522792 CPSF1Q10570 1443 aaKnown RBP20.81■□□□□ 0.92
CTNNA1-236ENST00000522792 NWD1Q149M9 1564 aa20.81■□□□□ 0.92
CTNNA1-236ENST00000522792 GGNBP2Q9H3C7 697 aa20.8■□□□□ 0.92
CTNNA1-236ENST00000522792 ITSN1Q15811 1721 aa20.8■□□□□ 0.92
CTNNA1-236ENST00000522792 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.8■□□□□ 0.928e-8■■□□□ 12.9
CTNNA1-236ENST00000522792 NKTRP30414 1462 aaKnown RBP20.78■□□□□ 0.92
CTNNA1-236ENST00000522792 FYB1O15117 783 aa20.78■□□□□ 0.92
CTNNA1-236ENST00000522792 AKAP12Q02952 1782 aa20.78■□□□□ 0.92
CTNNA1-236ENST00000522792 KIF20BQ96Q89 1820 aa20.78■□□□□ 0.92
CTNNA1-236ENST00000522792 MON2Q7Z3U7 1717 aa20.77■□□□□ 0.92
CTNNA1-236ENST00000522792 FMN2Q9NZ56 1722 aa20.77■□□□□ 0.92
CTNNA1-236ENST00000522792 RGPD8O14715 1765 aaPredicted RBP20.77■□□□□ 0.92
CTNNA1-236ENST00000522792 EDC4Q6P2E9 1401 aaKnown RBP20.76■□□□□ 0.91
CTNNA1-236ENST00000522792 ANKRD26Q9UPS8 1709 aa20.76■□□□□ 0.91
CTNNA1-236ENST00000522792 C14orf37Q86TY3 774 aa20.75■□□□□ 0.91
CTNNA1-236ENST00000522792 ACEP12821 1306 aa20.75■□□□□ 0.91
CTNNA1-236ENST00000522792 SENP3-EIF4A1A0A087X0R7 540 aa20.75■□□□□ 0.91
CTNNA1-236ENST00000522792 PMFBP1Q8TBY8 1022 aa20.75■□□□□ 0.91
CTNNA1-236ENST00000522792 ADGRL3Q9HAR2 1447 aa20.74■□□□□ 0.91
CTNNA1-236ENST00000522792 PLEKHG3A1L390 1219 aa20.74■□□□□ 0.91
CTNNA1-236ENST00000522792 STRCQ7RTU9 1775 aa20.74■□□□□ 0.91
CTNNA1-236ENST00000522792 PROSER2Q86WR7 435 aaPredicted RBP20.73■□□□□ 0.91
CTNNA1-236ENST00000522792 ANKARQ7Z5J8 1434 aa20.73■□□□□ 0.91
CTNNA1-236ENST00000522792 ZNF692Q9BU19 519 aaPredicted RBP20.72■□□□□ 0.91
CTNNA1-236ENST00000522792 NME9Q86XW9 330 aa20.71■□□□□ 0.91
CTNNA1-236ENST00000522792 STRCP1A6NGW2 1772 aa20.71■□□□□ 0.91
CTNNA1-236ENST00000522792 WDR43Q15061 677 aaKnown RBP eCLIP20.7■□□□□ 0.9
CTNNA1-236ENST00000522792 ZRANB1Q9UGI0 708 aa20.7■□□□□ 0.9
CTNNA1-236ENST00000522792 NRKQ7Z2Y5 1582 aa20.69■□□□□ 0.9
CTNNA1-236ENST00000522792 MTHFSP49914 203 aa20.69■□□□□ 0.9
CTNNA1-236ENST00000522792 NGDNQ8NEJ9 315 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms