RNA–Protein interactions for RNA: ENST00000520851.1

PDGFRB-208, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 2

Gene PDGFRB, Length 406 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-208ENST00000520851 PTCH1Q13635 1447 aa11.92□□□□□ -0.5
PDGFRB-208ENST00000520851 LRPPRCP42704 1394 aaKnown RBP11.92□□□□□ -0.5
PDGFRB-208ENST00000520851 ABCC11Q96J66 1382 aa11.92□□□□□ -0.5
PDGFRB-208ENST00000520851 SIRT1Q96EB6 747 aa11.91□□□□□ -0.5
PDGFRB-208ENST00000520851 FAM135BQ49AJ0 1406 aa11.9□□□□□ -0.5
PDGFRB-208ENST00000520851 AMOTL2Q9Y2J4 779 aa11.9□□□□□ -0.5
PDGFRB-208ENST00000520851 NCOA3Q9Y6Q9 1424 aa11.9□□□□□ -0.5
PDGFRB-208ENST00000520851 SLC24A1O60721 1099 aa11.89□□□□□ -0.51
PDGFRB-208ENST00000520851 TMEM132EQ6IEE7 984 aa11.89□□□□□ -0.51
PDGFRB-208ENST00000520851 CARD11Q9BXL7 1154 aa11.89□□□□□ -0.51
PDGFRB-208ENST00000520851 NALCNQ8IZF0 1738 aa11.89□□□□□ -0.51
PDGFRB-208ENST00000520851 PTPRUQ92729 1446 aa11.88□□□□□ -0.51
PDGFRB-208ENST00000520851 LTBP4Q8N2S1 1624 aa11.88□□□□□ -0.51
PDGFRB-208ENST00000520851 ITSN1Q15811 1721 aa11.87□□□□□ -0.51
PDGFRB-208ENST00000520851 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.87□□□□□ -0.51
PDGFRB-208ENST00000520851 NBPF1Q3BBV0 1214 aa11.87□□□□□ -0.51
PDGFRB-208ENST00000520851 IQSEC2Q5JU85 1478 aa11.87□□□□□ -0.51
PDGFRB-208ENST00000520851 ABCB7O75027 752 aa11.86□□□□□ -0.51
PDGFRB-208ENST00000520851 CACNB1Q02641 598 aaPredicted RBP11.86□□□□□ -0.51
PDGFRB-208ENST00000520851 ADGRB2O60241 1585 aa11.86□□□□□ -0.51
PDGFRB-208ENST00000520851 ZNF335Q9H4Z2 1342 aaPredicted RBP11.86□□□□□ -0.51
PDGFRB-208ENST00000520851 PROSER2Q86WR7 435 aaPredicted RBP11.85□□□□□ -0.51
PDGFRB-208ENST00000520851 POGKQ9P215 609 aa11.85□□□□□ -0.51
PDGFRB-208ENST00000520851 STK26Q9P289 416 aa11.85□□□□□ -0.51
PDGFRB-208ENST00000520851 TRAK1Q9UPV9 953 aa11.85□□□□□ -0.51
PDGFRB-208ENST00000520851 LRRC7Q96NW7 1537 aa11.85□□□□□ -0.51
PDGFRB-208ENST00000520851 RGPD8O14715 1765 aaPredicted RBP11.84□□□□□ -0.51
PDGFRB-208ENST00000520851 CDC42BPGQ6DT37 1551 aa11.84□□□□□ -0.51
PDGFRB-208ENST00000520851 FMN2Q9NZ56 1722 aa11.83□□□□□ -0.52
PDGFRB-208ENST00000520851 USP47Q96K76 1375 aa11.83□□□□□ -0.52
PDGFRB-208ENST00000520851 EIF4G2P78344 907 aaKnown RBP eCLIP11.83□□□□□ -0.52
PDGFRB-208ENST00000520851 FKBP8Q14318 412 aa11.83□□□□□ -0.52
PDGFRB-208ENST00000520851 CENPJQ9HC77 1338 aaPredicted RBP11.83□□□□□ -0.52
PDGFRB-208ENST00000520851 ROBO2Q9HCK4 1378 aa11.82□□□□□ -0.52
PDGFRB-208ENST00000520851 SBNO2Q9Y2G9 1366 aa11.82□□□□□ -0.52
PDGFRB-208ENST00000520851 DCCP43146 1447 aa11.82□□□□□ -0.52
PDGFRB-208ENST00000520851 ADGRL3Q9HAR2 1447 aa11.82□□□□□ -0.52
PDGFRB-208ENST00000520851 MSH6P52701 1360 aa11.81□□□□□ -0.52
PDGFRB-208ENST00000520851 DSG3P32926 999 aa11.81□□□□□ -0.52
PDGFRB-208ENST00000520851 C14orf37Q86TY3 774 aa11.81□□□□□ -0.52
PDGFRB-208ENST00000520851 PRAM1Q96QH2 718 aa11.81□□□□□ -0.52
PDGFRB-208ENST00000520851 TMEM94Q12767 1356 aa11.8□□□□□ -0.52
PDGFRB-208ENST00000520851 C19orf44Q9H6X5 657 aa11.8□□□□□ -0.52
PDGFRB-208ENST00000520851 KIF1AQ12756 1690 aa11.78□□□□□ -0.52
PDGFRB-208ENST00000520851 MKRN4PQ13434 485 aaPredicted RBP11.78□□□□□ -0.52
PDGFRB-208ENST00000520851 WAPLQ7Z5K2 1190 aa11.78□□□□□ -0.52
PDGFRB-208ENST00000520851 ST20-MTHFSA0A0A6YYL1 179 aa11.77□□□□□ -0.53
PDGFRB-208ENST00000520851 ATF3P18847 181 aa11.77□□□□□ -0.53
PDGFRB-208ENST00000520851 CDCA8Q53HL2 280 aa11.77□□□□□ -0.53
PDGFRB-208ENST00000520851 CADPS2Q86UW7 1296 aa11.77□□□□□ -0.53
PDGFRB-208ENST00000520851 EVC2Q86UK5 1308 aa11.77□□□□□ -0.53
PDGFRB-208ENST00000520851 TOPAZ1Q8N9V7 1692 aa11.77□□□□□ -0.53
PDGFRB-208ENST00000520851 PLEKHH1Q9ULM0 1364 aa11.77□□□□□ -0.53
PDGFRB-208ENST00000520851 TULP4Q9NRJ4 1543 aa11.76□□□□□ -0.53
PDGFRB-208ENST00000520851 TMF1P82094 1093 aa11.76□□□□□ -0.53
PDGFRB-208ENST00000520851 AKAP12Q02952 1782 aa11.75□□□□□ -0.53
PDGFRB-208ENST00000520851 SAFB2Q14151 953 aaKnown RBP eCLIP11.75□□□□□ -0.53
PDGFRB-208ENST00000520851 CERKQ8TCT0 537 aa11.75□□□□□ -0.53
PDGFRB-208ENST00000520851 PUS7Q96PZ0 661 aaKnown RBP11.75□□□□□ -0.53
PDGFRB-208ENST00000520851 MINK1Q8N4C8 1332 aaPredicted RBP11.75□□□□□ -0.53
PDGFRB-208ENST00000520851 USP32Q8NFA0 1604 aa11.75□□□□□ -0.53
PDGFRB-208ENST00000520851 WASLO00401 505 aaPredicted RBP11.74□□□□□ -0.53
PDGFRB-208ENST00000520851 TOM1O60784 492 aa11.74□□□□□ -0.53
PDGFRB-208ENST00000520851 HSPA5P11021 654 aaKnown RBP11.74□□□□□ -0.53
PDGFRB-208ENST00000520851 ANKARQ7Z5J8 1434 aa11.74□□□□□ -0.53
PDGFRB-208ENST00000520851 ROBO1Q9Y6N7 1651 aa11.72□□□□□ -0.53
PDGFRB-208ENST00000520851 ATAD2Q6PL18 1390 aa11.72□□□□□ -0.53
PDGFRB-208ENST00000520851 TESK2Q96S53 571 aa11.72□□□□□ -0.53
PDGFRB-208ENST00000520851 MYOM1P52179 1685 aa11.71□□□□□ -0.53
PDGFRB-208ENST00000520851 NINLQ9Y2I6 1382 aa11.71□□□□□ -0.53
PDGFRB-208ENST00000520851 SRPK2P78362 688 aaKnown RBP11.71□□□□□ -0.53
PDGFRB-208ENST00000520851 RBM33Q96EV2 1170 aaKnown RBP11.71□□□□□ -0.53
PDGFRB-208ENST00000520851 HIRIP3Q9BW71 556 aaPredicted RBP11.71□□□□□ -0.53
PDGFRB-208ENST00000520851 CDK19Q9BWU1 502 aa11.71□□□□□ -0.53
PDGFRB-208ENST00000520851 ZBTB12Q9Y330 459 aaPredicted RBP11.71□□□□□ -0.53
PDGFRB-208ENST00000520851 NHSL1Q5SYE7 1610 aa11.71□□□□□ -0.54
PDGFRB-208ENST00000520851 MST1RQ04912 1400 aa11.7□□□□□ -0.54
PDGFRB-208ENST00000520851 MON2Q7Z3U7 1717 aa11.7□□□□□ -0.54
PDGFRB-208ENST00000520851 ATP7BP35670 1465 aa11.7□□□□□ -0.54
PDGFRB-208ENST00000520851 SLAIN2Q9P270 581 aa11.69□□□□□ -0.54
PDGFRB-208ENST00000520851 C1orf167Q5SNV9 1468 aa11.69□□□□□ -0.54
PDGFRB-208ENST00000520851 CCDC61Q9Y6R9 512 aa11.68□□□□□ -0.54
PDGFRB-208ENST00000520851 PHLPP1O60346 1717 aa11.68□□□□□ -0.54
PDGFRB-208ENST00000520851 NUDT16Q96DE0 195 aaKnown RBP11.67□□□□□ -0.54
PDGFRB-208ENST00000520851 DISP3Q9P2K9 1392 aa11.67□□□□□ -0.54
PDGFRB-208ENST00000520851 KIF20BQ96Q89 1820 aa11.66□□□□□ -0.54
PDGFRB-208ENST00000520851 UBAP1LF5GYI3 381 aa11.66□□□□□ -0.54
PDGFRB-208ENST00000520851 CABP2Q9NPB3 220 aa11.66□□□□□ -0.54
PDGFRB-208ENST00000520851 PPIP5K1Q6PFW1 1433 aa11.66□□□□□ -0.54
PDGFRB-208ENST00000520851 AHDC1Q5TGY3 1603 aaPredicted RBP11.65□□□□□ -0.54
PDGFRB-208ENST00000520851 ESCO1Q5FWF5 840 aa11.65□□□□□ -0.54
PDGFRB-208ENST00000520851 ZNF692Q9BU19 519 aaPredicted RBP11.64□□□□□ -0.55
PDGFRB-208ENST00000520851 BRD4O60885 1362 aaPredicted RBP11.64□□□□□ -0.55
PDGFRB-208ENST00000520851 TRPM3Q9HCF6 1732 aaPredicted RBP11.63□□□□□ -0.55
PDGFRB-208ENST00000520851 ANKRD26Q9UPS8 1709 aa11.63□□□□□ -0.55
PDGFRB-208ENST00000520851 PLEKHG3A1L390 1219 aa11.63□□□□□ -0.55
PDGFRB-208ENST00000520851 NUTM2FA1L443 756 aa11.63□□□□□ -0.55
PDGFRB-208ENST00000520851 TERF2IPQ9NYB0 399 aa11.63□□□□□ -0.55
PDGFRB-208ENST00000520851 PHF8Q9UPP1 1060 aa11.63□□□□□ -0.55
PDGFRB-208ENST00000520851 NRKQ7Z2Y5 1582 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms