RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 HOXA2O43364 376 aa11.92□□□□□ -0.5
SHPRH-208ENST00000520752 RSBN1LQ6PCB5 846 aaPredicted RBP11.92□□□□□ -0.5
SHPRH-208ENST00000520752 THSD4Q6ZMP0 1018 aa11.92□□□□□ -0.5
SHPRH-208ENST00000520752 PROCA1Q8NCQ7 364 aaPredicted RBP11.92□□□□□ -0.5
SHPRH-208ENST00000520752 CCDC136Q96JN2 1154 aa11.92□□□□□ -0.5
SHPRH-208ENST00000520752 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.92□□□□□ -0.5
SHPRH-208ENST00000520752 WRNQ14191 1432 aaPredicted RBP eCLIP11.92□□□□□ -0.5
SHPRH-208ENST00000520752 ACTN4O43707 911 aaKnown RBP11.91□□□□□ -0.5
SHPRH-208ENST00000520752 GRIPAP1Q4V328 841 aa11.91□□□□□ -0.5
SHPRH-208ENST00000520752 LIMD1Q9UGP4 676 aa11.91□□□□□ -0.5
SHPRH-208ENST00000520752 NDUFV2P19404 249 aa11.9□□□□□ -0.5
SHPRH-208ENST00000520752 ATP6V1AP38606 617 aa11.9□□□□□ -0.5
SHPRH-208ENST00000520752 FUT2Q10981 343 aa11.9□□□□□ -0.5
SHPRH-208ENST00000520752 RTL5Q5HYW3 569 aaPredicted RBP11.89□□□□□ -0.51
SHPRH-208ENST00000520752 KCTD12Q96CX2 325 aaKnown RBP11.89□□□□□ -0.51
SHPRH-208ENST00000520752 WBP1LQ9NX94 342 aa11.88□□□□□ -0.51
SHPRH-208ENST00000520752 APLP1P51693 650 aa11.87□□□□□ -0.51
SHPRH-208ENST00000520752 FDX1P10109 184 aa11.86□□□□□ -0.51
SHPRH-208ENST00000520752 NYAP1Q6ZVC0 841 aa11.86□□□□□ -0.51
SHPRH-208ENST00000520752 PRPF38BQ5VTL8 546 aaKnown RBP11.85□□□□□ -0.51
SHPRH-208ENST00000520752 NOP58Q9Y2X3 529 aaKnown RBP11.85□□□□□ -0.51
SHPRH-208ENST00000520752 PCDHB15Q9Y5E8 787 aa11.85□□□□□ -0.51
SHPRH-208ENST00000520752 MORN1Q5T089 497 aa11.84□□□□□ -0.51
SHPRH-208ENST00000520752 PPP2R2DQ66LE6 453 aa11.84□□□□□ -0.51
SHPRH-208ENST00000520752 USP35Q9P2H5 1018 aa11.84□□□□□ -0.51
SHPRH-208ENST00000520752 ATP1B4Q9UN42 357 aaPredicted RBP11.84□□□□□ -0.51
SHPRH-208ENST00000520752 PCDHGC3Q9UN70 934 aa11.84□□□□□ -0.51
SHPRH-208ENST00000520752 LILRB3O75022 631 aa11.83□□□□□ -0.52
SHPRH-208ENST00000520752 HLA-CQ95604 372 aa11.83□□□□□ -0.52
SHPRH-208ENST00000520752 SPNS2Q8IVW8 549 aa11.82□□□□□ -0.52
SHPRH-208ENST00000520752 GUCA2AQ02747 115 aa11.81□□□□□ -0.52
SHPRH-208ENST00000520752 QPCTQ16769 361 aa11.8□□□□□ -0.52
SHPRH-208ENST00000520752 ZBTB3Q9H5J0 574 aa11.8□□□□□ -0.52
SHPRH-208ENST00000520752 PCDHB3Q9Y5E6 796 aa11.8□□□□□ -0.52
SHPRH-208ENST00000520752 WASHC2AQ641Q2 1341 aa11.8□□□□□ -0.52
SHPRH-208ENST00000520752 WASHC2CQ9Y4E1 1318 aa11.8□□□□□ -0.52
SHPRH-208ENST00000520752 PUS10Q3MIT2 529 aaKnown RBP11.79□□□□□ -0.52
SHPRH-208ENST00000520752 FBXO31Q5XUX0 539 aaPredicted RBP11.79□□□□□ -0.52
SHPRH-208ENST00000520752 SLC27A5Q9Y2P5 690 aa11.79□□□□□ -0.52
SHPRH-208ENST00000520752 RFC5P40937 340 aa11.78□□□□□ -0.52
SHPRH-208ENST00000520752 PTPN5P54829 565 aa11.78□□□□□ -0.52
SHPRH-208ENST00000520752 CSPP1Q1MSJ5 1256 aa11.78□□□□□ -0.52
SHPRH-208ENST00000520752 SPDYE5A6NIY4 337 aa11.77□□□□□ -0.53
SHPRH-208ENST00000520752 MTMR2Q13614 643 aa11.77□□□□□ -0.53
SHPRH-208ENST00000520752 Q3C1V9 767 aa11.77□□□□□ -0.53
SHPRH-208ENST00000520752 NR1I2O75469 434 aa11.76□□□□□ -0.53
SHPRH-208ENST00000520752 TMEM259Q4ZIN3 620 aa11.76□□□□□ -0.53
SHPRH-208ENST00000520752 SCUBE3Q8IX30 993 aa11.76□□□□□ -0.53
SHPRH-208ENST00000520752 CABLES1Q8TDN4 633 aa11.76□□□□□ -0.53
SHPRH-208ENST00000520752 NUTM2BA6NNL0 878 aaPredicted RBP11.75□□□□□ -0.53
SHPRH-208ENST00000520752 NUTM2EB1AL46 878 aaPredicted RBP11.75□□□□□ -0.53
SHPRH-208ENST00000520752 NUTM2DQ5VT03 806 aaPredicted RBP11.75□□□□□ -0.53
SHPRH-208ENST00000520752 NUTM2AQ8IVF1 878 aaPredicted RBP11.75□□□□□ -0.53
SHPRH-208ENST00000520752 ZMYND15Q9H091 742 aa11.75□□□□□ -0.53
SHPRH-208ENST00000520752 FLIIQ13045 1269 aa11.74□□□□□ -0.53
SHPRH-208ENST00000520752 BLOC1S3Q6QNY0 202 aa11.74□□□□□ -0.53
SHPRH-208ENST00000520752 BANK1Q8NDB2 785 aa11.74□□□□□ -0.53
SHPRH-208ENST00000520752 C6orf229H3BNL8 230 aa11.73□□□□□ -0.53
SHPRH-208ENST00000520752 BRICD5Q6PL45 260 aa11.73□□□□□ -0.53
SHPRH-208ENST00000520752 RNF166Q96A37 237 aaPredicted RBP11.73□□□□□ -0.53
SHPRH-208ENST00000520752 THAP11Q96EK4 314 aa11.72□□□□□ -0.53
SHPRH-208ENST00000520752 HCSTQ9UBK5 93 aa11.72□□□□□ -0.53
SHPRH-208ENST00000520752 RANGAP1P46060 587 aaPredicted RBP11.71□□□□□ -0.53
SHPRH-208ENST00000520752 RETREG3Q86VR2 466 aa11.71□□□□□ -0.53
SHPRH-208ENST00000520752 SYMPKQ92797 1274 aaKnown RBP11.7□□□□□ -0.54
SHPRH-208ENST00000520752 FMNL1O95466 1100 aaPredicted RBP11.69□□□□□ -0.54
SHPRH-208ENST00000520752 RNF19BQ6ZMZ0 732 aa11.69□□□□□ -0.54
SHPRH-208ENST00000520752 CCER2I3L3R5 266 aa11.68□□□□□ -0.54
SHPRH-208ENST00000520752 COPS2P61201 443 aa11.68□□□□□ -0.54
SHPRH-208ENST00000520752 TJAP1Q5JTD0 557 aa11.68□□□□□ -0.54
SHPRH-208ENST00000520752 FAM43AQ8N2R8 423 aa11.68□□□□□ -0.54
SHPRH-208ENST00000520752 MTRQ99707 1265 aa11.68□□□□□ -0.54
SHPRH-208ENST00000520752 USB1Q9BQ65 265 aaKnown RBP11.68□□□□□ -0.54
SHPRH-208ENST00000520752 CFAP99D6REC4 459 aa11.67□□□□□ -0.54
SHPRH-208ENST00000520752 ZPR1O75312 459 aa11.67□□□□□ -0.54
SHPRH-208ENST00000520752 PDE4CQ08493 712 aa11.67□□□□□ -0.54
SHPRH-208ENST00000520752 PRR7Q8TB68 274 aa11.67□□□□□ -0.54
SHPRH-208ENST00000520752 IL21Q9HBE4 155 aa11.67□□□□□ -0.54
SHPRH-208ENST00000520752 FGD1P98174 961 aa11.66□□□□□ -0.54
SHPRH-208ENST00000520752 DESI1Q6ICB0 168 aa11.66□□□□□ -0.54
SHPRH-208ENST00000520752 TIMELESSQ9UNS1 1208 aa11.66□□□□□ -0.54
SHPRH-208ENST00000520752 RRP9O43818 475 aaKnown RBP11.65□□□□□ -0.54
SHPRH-208ENST00000520752 AP1G2O75843 785 aa11.65□□□□□ -0.54
SHPRH-208ENST00000520752 MCM6Q14566 821 aa11.65□□□□□ -0.54
SHPRH-208ENST00000520752 C14orf37Q86TY3 774 aa11.65□□□□□ -0.54
SHPRH-208ENST00000520752 IPO9Q96P70 1041 aaKnown RBP11.65□□□□□ -0.54
SHPRH-208ENST00000520752 SOCS7O14512 581 aa11.64□□□□□ -0.55
SHPRH-208ENST00000520752 ANP32AP39687 249 aaKnown RBP11.64□□□□□ -0.55
SHPRH-208ENST00000520752 MMRN1Q13201 1228 aa11.64□□□□□ -0.55
SHPRH-208ENST00000520752 HELBQ8NG08 1087 aaPredicted RBP11.64□□□□□ -0.55
SHPRH-208ENST00000520752 SPSB2Q99619 263 aa11.64□□□□□ -0.55
SHPRH-208ENST00000520752 PPP4R2Q9NY27 417 aa11.64□□□□□ -0.55
SHPRH-208ENST00000520752 PPM1GO15355 546 aaPredicted RBP11.63□□□□□ -0.55
SHPRH-208ENST00000520752 EEA1Q15075 1411 aa11.62□□□□□ -0.55
SHPRH-208ENST00000520752 PDIA4P13667 645 aaKnown RBP11.62□□□□□ -0.55
SHPRH-208ENST00000520752 CTDSPL2Q05D32 466 aa11.62□□□□□ -0.55
SHPRH-208ENST00000520752 MSS51Q4VC12 460 aa11.62□□□□□ -0.55
SHPRH-208ENST00000520752 ZNF516Q92618 1163 aa11.62□□□□□ -0.55
SHPRH-208ENST00000520752 SNRKQ9NRH2 765 aa11.62□□□□□ -0.55
SHPRH-208ENST00000520752 USP17L8P0C7I0 530 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms