RNA–Protein interactions for RNA: ENST00000520679.1

EXTL3-207, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 546 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-207ENST00000520679 HNRNPUQ00839 825 aaKnown RBP eCLIP19.13■□□□□ 0.65
EXTL3-207ENST00000520679 GTF3C3Q9Y5Q9 886 aa19.13■□□□□ 0.65
EXTL3-207ENST00000520679 ZBED9Q6R2W3 1325 aa19.13■□□□□ 0.65
EXTL3-207ENST00000520679 ZNF142P52746 1687 aaPredicted RBP19.13■□□□□ 0.65
EXTL3-207ENST00000520679 ANKRD36BQ8N2N9 1353 aa19.12■□□□□ 0.65
EXTL3-207ENST00000520679 CEBPAP49715 358 aaPredicted RBP19.12■□□□□ 0.65
EXTL3-207ENST00000520679 CEP170BQ9Y4F5 1589 aaPredicted RBP19.11■□□□□ 0.65
EXTL3-207ENST00000520679 FAM9BQ8IZU0 186 aa19.11■□□□□ 0.65
EXTL3-207ENST00000520679 PRAM1Q96QH2 718 aa19.11■□□□□ 0.65
EXTL3-207ENST00000520679 POGKQ9P215 609 aa19.11■□□□□ 0.65
EXTL3-207ENST00000520679 METP08581 1390 aa19.1■□□□□ 0.65
EXTL3-207ENST00000520679 CC2D1BQ5T0F9 858 aaKnown RBP19.1■□□□□ 0.65
EXTL3-207ENST00000520679 THEMISQ8N1K5 641 aaPredicted RBP19.1■□□□□ 0.65
EXTL3-207ENST00000520679 STK26Q9P289 416 aa19.1■□□□□ 0.65
EXTL3-207ENST00000520679 NSD2O96028 1365 aa19.09■□□□□ 0.65
EXTL3-207ENST00000520679 CARD14Q9BXL6 1004 aa19.09■□□□□ 0.65
EXTL3-207ENST00000520679 EID1Q9Y6B2 187 aa19.08■□□□□ 0.64
EXTL3-207ENST00000520679 NSD3Q9BZ95 1437 aa19.08■□□□□ 0.64
EXTL3-207ENST00000520679 ADGRB2O60241 1585 aa19.06■□□□□ 0.64
EXTL3-207ENST00000520679 PPP2R1AP30153 589 aa19.06■□□□□ 0.64
EXTL3-207ENST00000520679 SETD1BQ9UPS6 1966 aaKnown RBP19.06■□□□□ 0.64
EXTL3-207ENST00000520679 LTKP29376 864 aa19.05■□□□□ 0.64
EXTL3-207ENST00000520679 SLC12A5Q9H2X9 1139 aa19.05■□□□□ 0.64
EXTL3-207ENST00000520679 TXNDC2Q86VQ3 553 aa19.04■□□□□ 0.64
EXTL3-207ENST00000520679 ATP7BP35670 1465 aa19.03■□□□□ 0.64
EXTL3-207ENST00000520679 MINK1Q8N4C8 1332 aaPredicted RBP19.03■□□□□ 0.64
EXTL3-207ENST00000520679 BLMP54132 1417 aaPredicted RBP19.03■□□□□ 0.64
EXTL3-207ENST00000520679 CNGB1Q14028 1251 aaPredicted RBP19.03■□□□□ 0.64
EXTL3-207ENST00000520679 TBX22Q9Y458 520 aa19.03■□□□□ 0.64
EXTL3-207ENST00000520679 CABP2Q9NPB3 220 aa19.02■□□□□ 0.64
EXTL3-207ENST00000520679 PIK3R4Q99570 1358 aa19.02■□□□□ 0.64
EXTL3-207ENST00000520679 PLEKHH1Q9ULM0 1364 aa19.02■□□□□ 0.64
EXTL3-207ENST00000520679 CGNL1Q0VF96 1302 aa19.01■□□□□ 0.63
EXTL3-207ENST00000520679 PTCH1Q13635 1447 aa19.01■□□□□ 0.63
EXTL3-207ENST00000520679 SRPK2P78362 688 aaKnown RBP19.01■□□□□ 0.63
EXTL3-207ENST00000520679 CD163L1Q9NR16 1453 aa19.01■□□□□ 0.63
EXTL3-207ENST00000520679 ANKRD26Q9UPS8 1709 aa19■□□□□ 0.63
EXTL3-207ENST00000520679 SAFB2Q14151 953 aaKnown RBP eCLIP19■□□□□ 0.63
EXTL3-207ENST00000520679 CDK19Q9BWU1 502 aa19■□□□□ 0.63
EXTL3-207ENST00000520679 A0A1W2PP64 1363 aa18.99■□□□□ 0.63
EXTL3-207ENST00000520679 TERF2IPQ9NYB0 399 aa18.99■□□□□ 0.63
EXTL3-207ENST00000520679 XRN1Q8IZH2 1706 aaKnown RBP18.99■□□□□ 0.63
EXTL3-207ENST00000520679 POLR3AO14802 1390 aaPredicted RBP18.98■□□□□ 0.63
EXTL3-207ENST00000520679 WASLO00401 505 aaPredicted RBP18.97■□□□□ 0.63
EXTL3-207ENST00000520679 WAPLQ7Z5K2 1190 aa18.97■□□□□ 0.63
EXTL3-207ENST00000520679 ROBO2Q9HCK4 1378 aa18.96■□□□□ 0.63
EXTL3-207ENST00000520679 BCANQ96GW7 911 aa18.96■□□□□ 0.63
EXTL3-207ENST00000520679 PTPRUQ92729 1446 aa18.96■□□□□ 0.63
EXTL3-207ENST00000520679 SMG6Q86US8 1419 aaKnown RBP18.94■□□□□ 0.62
EXTL3-207ENST00000520679 HDGFL2Q7Z4V5 671 aaPredicted RBP18.94■□□□□ 0.62
EXTL3-207ENST00000520679 SENP3Q9H4L4 574 aaPredicted RBP18.94■□□□□ 0.62
EXTL3-207ENST00000520679 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.94■□□□□ 0.62
EXTL3-207ENST00000520679 TOPAZ1Q8N9V7 1692 aa18.93■□□□□ 0.62
EXTL3-207ENST00000520679 CDC42BPGQ6DT37 1551 aa18.93■□□□□ 0.62
EXTL3-207ENST00000520679 KIF20BQ96Q89 1820 aa18.93■□□□□ 0.62
EXTL3-207ENST00000520679 CPSF1Q10570 1443 aaKnown RBP18.92■□□□□ 0.62
EXTL3-207ENST00000520679 MORC1Q86VD1 984 aa18.92■□□□□ 0.62
EXTL3-207ENST00000520679 MON2Q7Z3U7 1717 aa18.91■□□□□ 0.62
EXTL3-207ENST00000520679 AKAP12Q02952 1782 aa18.91■□□□□ 0.62
EXTL3-207ENST00000520679 PDE3BQ13370 1112 aa18.89■□□□□ 0.61
EXTL3-207ENST00000520679 ANKLE2Q86XL3 938 aa18.89■□□□□ 0.61
EXTL3-207ENST00000520679 PPIP5K1Q6PFW1 1433 aa18.89■□□□□ 0.61
EXTL3-207ENST00000520679 WDR43Q15061 677 aaKnown RBP eCLIP18.88■□□□□ 0.61
EXTL3-207ENST00000520679 SLC26A8Q96RN1 970 aa18.88■□□□□ 0.61
EXTL3-207ENST00000520679 CABP1Q9NZU7 370 aa18.88■□□□□ 0.61
EXTL3-207ENST00000520679 EDC4Q6P2E9 1401 aaKnown RBP18.88■□□□□ 0.61
EXTL3-207ENST00000520679 ITSN1Q15811 1721 aa18.87■□□□□ 0.61
EXTL3-207ENST00000520679 PLPPR3Q6T4P5 718 aa18.87■□□□□ 0.61
EXTL3-207ENST00000520679 AMOTL2Q9Y2J4 779 aa18.87■□□□□ 0.61
EXTL3-207ENST00000520679 CCDC61Q9Y6R9 512 aa18.87■□□□□ 0.61
EXTL3-207ENST00000520679 CHD2O14647 1828 aaKnown RBP18.86■□□□□ 0.61
EXTL3-207ENST00000520679 SHPRHQ149N8 1683 aa18.86■□□□□ 0.61
EXTL3-207ENST00000520679 NUDT16Q96DE0 195 aaKnown RBP18.86■□□□□ 0.61
EXTL3-207ENST00000520679 NUDCQ9Y266 331 aa18.86■□□□□ 0.61
EXTL3-207ENST00000520679 NGEFQ8N5V2 710 aa18.85■□□□□ 0.61
EXTL3-207ENST00000520679 ADAMTS8Q9UP79 889 aa18.84■□□□□ 0.61
EXTL3-207ENST00000520679 FYB1O15117 783 aa18.83■□□□□ 0.6
EXTL3-207ENST00000520679 NEFLP07196 543 aa18.83■□□□□ 0.6
EXTL3-207ENST00000520679 ZNF692Q9BU19 519 aaPredicted RBP18.83■□□□□ 0.6
EXTL3-207ENST00000520679 ANKARQ7Z5J8 1434 aa18.83■□□□□ 0.6
EXTL3-207ENST00000520679 NRKQ7Z2Y5 1582 aa18.82■□□□□ 0.6
EXTL3-207ENST00000520679 PLEKHG3A1L390 1219 aa18.82■□□□□ 0.6
EXTL3-207ENST00000520679 CFAP53Q96M91 514 aa18.82■□□□□ 0.6
EXTL3-207ENST00000520679 SUPT16HQ9Y5B9 1047 aaKnown RBP18.82■□□□□ 0.6
EXTL3-207ENST00000520679 PRR36Q9H6K5 1346 aa18.81■□□□□ 0.6
EXTL3-207ENST00000520679 NPHP4O75161 1426 aaPredicted RBP18.81■□□□□ 0.6
EXTL3-207ENST00000520679 NWD1Q149M9 1564 aa18.8■□□□□ 0.6
EXTL3-207ENST00000520679 COL3A1P02461 1466 aaPredicted RBP18.79■□□□□ 0.6
EXTL3-207ENST00000520679 ERICH6BQ5W0A0 696 aa18.79■□□□□ 0.6
EXTL3-207ENST00000520679 FMN2Q9NZ56 1722 aa18.78■□□□□ 0.6
EXTL3-207ENST00000520679 NCBP3Q53F19 620 aaKnown RBP18.78■□□□□ 0.6
EXTL3-207ENST00000520679 MTHFSP49914 203 aa18.77■□□□□ 0.6
EXTL3-207ENST00000520679 AATKQ6ZMQ8 1374 aa18.77■□□□□ 0.6
EXTL3-207ENST00000520679 PNPLA6Q8IY17 1366 aa18.77■□□□□ 0.6
EXTL3-207ENST00000520679 RNF123Q5XPI4 1314 aa18.76■□□□□ 0.59
EXTL3-207ENST00000520679 GGNBP2Q9H3C7 697 aa18.76■□□□□ 0.59
EXTL3-207ENST00000520679 ZNF521Q96K83 1311 aa18.75■□□□□ 0.59
EXTL3-207ENST00000520679 KCNA6P17658 529 aa18.75■□□□□ 0.59
EXTL3-207ENST00000520679 NKTRP30414 1462 aaKnown RBP18.75■□□□□ 0.59
EXTL3-207ENST00000520679 LMTK3Q96Q04 1460 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms