RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 MRC2Q9UBG0 1479 aa14.67□□□□□ -0.06
ERGIC1-208ENST00000520399 RUFY2Q8WXA3 655 aa14.67□□□□□ -0.06
ERGIC1-208ENST00000520399 C9orf78Q9NZ63 289 aaPredicted RBP14.67□□□□□ -0.06
ERGIC1-208ENST00000520399 BRD4O60885 1362 aaPredicted RBP14.67□□□□□ -0.06
ERGIC1-208ENST00000520399 PSME1Q06323 249 aa14.67□□□□□ -0.06
ERGIC1-208ENST00000520399 GOLGA6L19H0YKK7 550 aa14.66□□□□□ -0.06
ERGIC1-208ENST00000520399 FAM69CQ0P6D2 419 aa14.66□□□□□ -0.06
ERGIC1-208ENST00000520399 FAM184AQ8NB25 1140 aa14.66□□□□□ -0.06
ERGIC1-208ENST00000520399 HMGN5P82970 282 aaKnown RBP14.66□□□□□ -0.06
ERGIC1-208ENST00000520399 LRRFIP1Q32MZ4 808 aaKnown RBP14.66□□□□□ -0.06
ERGIC1-208ENST00000520399 PAXIP1Q6ZW49 1069 aaPredicted RBP14.66□□□□□ -0.06
ERGIC1-208ENST00000520399 ATP6V1DQ9Y5K8 247 aa14.66□□□□□ -0.06
ERGIC1-208ENST00000520399 GNAI1P63096 354 aa14.66□□□□□ -0.06
ERGIC1-208ENST00000520399 TRIM34Q9BYJ4 488 aa14.66□□□□□ -0.06
ERGIC1-208ENST00000520399 RUFY1Q96T51 708 aa14.66□□□□□ -0.06
ERGIC1-208ENST00000520399 REC8O95072 547 aa14.65□□□□□ -0.06
ERGIC1-208ENST00000520399 AEBP1Q8IUX7 1158 aa14.65□□□□□ -0.06
ERGIC1-208ENST00000520399 CCDC191Q8NCU4 936 aa14.65□□□□□ -0.06
ERGIC1-208ENST00000520399 ANKRD20A12PQ8NF67 263 aa14.65□□□□□ -0.06
ERGIC1-208ENST00000520399 DDX58O95786 925 aaKnown RBP14.65□□□□□ -0.06
ERGIC1-208ENST00000520399 SLC4A3P48751 1232 aa14.65□□□□□ -0.06
ERGIC1-208ENST00000520399 DEF6Q9H4E7 631 aa14.65□□□□□ -0.06
ERGIC1-208ENST00000520399 IFT140Q96RY7 1462 aa14.64□□□□□ -0.07
ERGIC1-208ENST00000520399 IFIT2P09913 472 aaKnown RBP14.64□□□□□ -0.07
ERGIC1-208ENST00000520399 CWC22Q9HCG8 908 aaKnown RBP14.64□□□□□ -0.07
ERGIC1-208ENST00000520399 RDXP35241 583 aaKnown RBP14.64□□□□□ -0.07
ERGIC1-208ENST00000520399 AMOTL1Q8IY63 956 aa14.64□□□□□ -0.07
ERGIC1-208ENST00000520399 NECTIN2Q92692 538 aa14.64□□□□□ -0.07
ERGIC1-208ENST00000520399 CABP2Q9NPB3 220 aa14.63□□□□□ -0.07
ERGIC1-208ENST00000520399 PRG4Q92954 1404 aaPredicted RBP14.63□□□□□ -0.07
ERGIC1-208ENST00000520399 BCL11BQ9C0K0 894 aaPredicted RBP14.63□□□□□ -0.07
ERGIC1-208ENST00000520399 BRD2P25440 801 aaKnown RBP14.63□□□□□ -0.07
ERGIC1-208ENST00000520399 AAMPQ13685 434 aa14.63□□□□□ -0.07
ERGIC1-208ENST00000520399 ODF2Q5BJF6 829 aa14.63□□□□□ -0.07
ERGIC1-208ENST00000520399 ACBD3Q9H3P7 528 aa14.63□□□□□ -0.07
ERGIC1-208ENST00000520399 TSPYL4Q9UJ04 414 aa14.63□□□□□ -0.07
ERGIC1-208ENST00000520399 DCTN1Q14203 1278 aa14.62□□□□□ -0.07
ERGIC1-208ENST00000520399 ANO2Q9NQ90 1003 aa14.62□□□□□ -0.07
ERGIC1-208ENST00000520399 DDX49Q9Y6V7 483 aaKnown RBP14.62□□□□□ -0.07
ERGIC1-208ENST00000520399 WASHC2AQ641Q2 1341 aa14.62□□□□□ -0.07
ERGIC1-208ENST00000520399 PLEKHH2Q8IVE3 1493 aa14.62□□□□□ -0.07
ERGIC1-208ENST00000520399 BECN2A8MW95 431 aa14.62□□□□□ -0.07
ERGIC1-208ENST00000520399 FKBP5Q13451 457 aaPredicted RBP14.61□□□□□ -0.07
ERGIC1-208ENST00000520399 CT47A1Q5JQC4 288 aaPredicted RBP14.61□□□□□ -0.07
ERGIC1-208ENST00000520399 SYNE3Q6ZMZ3 975 aa14.61□□□□□ -0.07
ERGIC1-208ENST00000520399 SUPT6HQ7KZ85 1726 aaKnown RBP14.61□□□□□ -0.07
ERGIC1-208ENST00000520399 HMGXB3Q12766 1538 aa14.61□□□□□ -0.07
ERGIC1-208ENST00000520399 HMOX1P09601 288 aa14.61□□□□□ -0.07
ERGIC1-208ENST00000520399 NOL10Q9BSC4 688 aaKnown RBP14.61□□□□□ -0.07
ERGIC1-208ENST00000520399 TIAM1Q13009 1591 aa14.6□□□□□ -0.07
ERGIC1-208ENST00000520399 C9orf84Q5VXU9 1444 aa14.6□□□□□ -0.07
ERGIC1-208ENST00000520399 ZKSCAN1P17029 563 aaPredicted RBP14.6□□□□□ -0.07
ERGIC1-208ENST00000520399 GGNBP2Q9H3C7 697 aa14.6□□□□□ -0.07
ERGIC1-208ENST00000520399 SCAPERQ9BY12 1400 aa14.6□□□□□ -0.07
ERGIC1-208ENST00000520399 HFM1A2PYH4 1435 aa14.6□□□□□ -0.07
ERGIC1-208ENST00000520399 USP8P40818 1118 aa14.59□□□□□ -0.07
ERGIC1-208ENST00000520399 G3BP1Q13283 466 aaKnown RBP eCLIP14.59□□□□□ -0.07
ERGIC1-208ENST00000520399 INTS3Q68E01 1043 aaKnown RBP14.59□□□□□ -0.07
ERGIC1-208ENST00000520399 CCDC43Q96MW1 224 aaKnown RBP14.59□□□□□ -0.07
ERGIC1-208ENST00000520399 KIAA1107Q9UPP5 1409 aa14.59□□□□□ -0.07
ERGIC1-208ENST00000520399 DNAJC2Q99543 621 aaKnown RBP14.59□□□□□ -0.07
ERGIC1-208ENST00000520399 TOPBP1Q92547 1522 aa14.58□□□□□ -0.07
ERGIC1-208ENST00000520399 HSP90AB4PQ58FF6 505 aa14.58□□□□□ -0.08
ERGIC1-208ENST00000520399 TMEM132EQ6IEE7 984 aa14.58□□□□□ -0.08
ERGIC1-208ENST00000520399 ZRSR2Q15696 482 aaKnown RBP14.58□□□□□ -0.08
ERGIC1-208ENST00000520399 CC2D2AQ9P2K1 1620 aa14.57□□□□□ -0.08
ERGIC1-208ENST00000520399 ARGLU1Q9NWB6 273 aaPredicted RBP14.57□□□□□ -0.08
ERGIC1-208ENST00000520399 STK11IPQ8N1F8 1099 aa14.57□□□□□ -0.08
ERGIC1-208ENST00000520399 HOOK1Q9UJC3 728 aaKnown RBP14.57□□□□□ -0.08
ERGIC1-208ENST00000520399 PRXQ9BXM0 1461 aa14.57□□□□□ -0.08
ERGIC1-208ENST00000520399 NESP48681 1621 aa14.57□□□□□ -0.08
ERGIC1-208ENST00000520399 RNF20Q5VTR2 975 aa14.57□□□□□ -0.08
ERGIC1-208ENST00000520399 MCTP1Q6DN14 999 aa14.57□□□□□ -0.08
ERGIC1-208ENST00000520399 CALCOCO1Q9P1Z2 691 aa14.57□□□□□ -0.08
ERGIC1-208ENST00000520399 ADAMTS8Q9UP79 889 aa14.56□□□□□ -0.08
ERGIC1-208ENST00000520399 TRIM29Q14134 588 aa14.56□□□□□ -0.08
ERGIC1-208ENST00000520399 ZNF592Q92610 1267 aa14.56□□□□□ -0.08
ERGIC1-208ENST00000520399 CCDC39Q9UFE4 941 aa14.56□□□□□ -0.08
ERGIC1-208ENST00000520399 PPP2R1AP30153 589 aa14.56□□□□□ -0.08
ERGIC1-208ENST00000520399 FOXD4L6Q3SYB3 417 aaPredicted RBP14.56□□□□□ -0.08
ERGIC1-208ENST00000520399 FOXD4L3Q6VB84 417 aaPredicted RBP14.56□□□□□ -0.08
ERGIC1-208ENST00000520399 ERC2O15083 957 aa14.55□□□□□ -0.08
ERGIC1-208ENST00000520399 AXDND1Q5T1B0 1012 aaPredicted RBP14.55□□□□□ -0.08
ERGIC1-208ENST00000520399 SNAPC4Q5SXM2 1469 aa14.55□□□□□ -0.08
ERGIC1-208ENST00000520399 DNMBPQ6XZF7 1577 aa14.55□□□□□ -0.08
ERGIC1-208ENST00000520399 HSP90AB2PQ58FF8 381 aa14.55□□□□□ -0.08
ERGIC1-208ENST00000520399 CPLX2Q6PUV4 134 aaKnown RBP14.55□□□□□ -0.08
ERGIC1-208ENST00000520399 PANK1Q8TE04 598 aa14.55□□□□□ -0.08
ERGIC1-208ENST00000520399 CHMP5Q9NZZ3 219 aa14.55□□□□□ -0.08
ERGIC1-208ENST00000520399 RAD21O60216 631 aa14.55□□□□□ -0.08
ERGIC1-208ENST00000520399 NEFHP12036 1026 aa14.55□□□□□ -0.08
ERGIC1-208ENST00000520399 MYO6Q9UM54 1294 aa14.55□□□□□ -0.08
ERGIC1-208ENST00000520399 ATF3P18847 181 aa14.55□□□□□ -0.08
ERGIC1-208ENST00000520399 MAPK8IP2Q13387 824 aaPredicted RBP14.55□□□□□ -0.08
ERGIC1-208ENST00000520399 RAPGEF4Q8WZA2 1011 aa14.55□□□□□ -0.08
ERGIC1-208ENST00000520399 CCDC173Q0VFZ6 552 aa14.54□□□□□ -0.08
ERGIC1-208ENST00000520399 AFAP1Q8N556 730 aa14.54□□□□□ -0.08
ERGIC1-208ENST00000520399 ZHX1Q9UKY1 873 aaPredicted RBP14.54□□□□□ -0.08
ERGIC1-208ENST00000520399 DAPK1P53355 1430 aa14.54□□□□□ -0.08
ERGIC1-208ENST00000520399 CLGNO14967 610 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms