RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 NSD3Q9BZ95 1437 aa24.81■■□□□ 1.56
FAM49B-214ENST00000519540 FKBP8Q14318 412 aa24.79■■□□□ 1.56
FAM49B-214ENST00000519540 METP08581 1390 aa24.79■■□□□ 1.56
FAM49B-214ENST00000519540 SRPK2P78362 688 aaKnown RBP24.79■■□□□ 1.56
FAM49B-214ENST00000519540 ANKRD36BQ8N2N9 1353 aa24.78■■□□□ 1.56
FAM49B-214ENST00000519540 NEFLP07196 543 aa24.78■■□□□ 1.56
FAM49B-214ENST00000519540 NINLQ9Y2I6 1382 aa24.77■■□□□ 1.56
FAM49B-214ENST00000519540 USP32Q8NFA0 1604 aa24.77■■□□□ 1.56
FAM49B-214ENST00000519540 WAPLQ7Z5K2 1190 aa24.76■■□□□ 1.55
FAM49B-214ENST00000519540 ATAD2Q6PL18 1390 aa24.75■■□□□ 1.55
FAM49B-214ENST00000519540 SENP3-EIF4A1A0A087X0R7 540 aa24.75■■□□□ 1.55
FAM49B-214ENST00000519540 BLMP54132 1417 aaPredicted RBP24.74■■□□□ 1.55
FAM49B-214ENST00000519540 SMG6Q86US8 1419 aaKnown RBP24.74■■□□□ 1.55
FAM49B-214ENST00000519540 CDK19Q9BWU1 502 aa24.74■■□□□ 1.55
FAM49B-214ENST00000519540 LTKP29376 864 aa24.73■■□□□ 1.55
FAM49B-214ENST00000519540 BCANQ96GW7 911 aa24.73■■□□□ 1.55
FAM49B-214ENST00000519540 PLEKHH1Q9ULM0 1364 aa24.73■■□□□ 1.55
FAM49B-214ENST00000519540 PLPPR3Q6T4P5 718 aa24.73■■□□□ 1.55
FAM49B-214ENST00000519540 CGNL1Q0VF96 1302 aa24.72■■□□□ 1.55
FAM49B-214ENST00000519540 PLEKHG1Q9ULL1 1385 aa24.71■■□□□ 1.55
FAM49B-214ENST00000519540 SIRT1Q96EB6 747 aa24.71■■□□□ 1.55
FAM49B-214ENST00000519540 ADAMTS8Q9UP79 889 aa24.71■■□□□ 1.55
FAM49B-214ENST00000519540 ADAMTS13Q76LX8 1427 aa24.71■■□□□ 1.55
FAM49B-214ENST00000519540 KNDC1Q76NI1 1749 aa24.7■■□□□ 1.54
FAM49B-214ENST00000519540 MORC1Q86VD1 984 aa24.7■■□□□ 1.54
FAM49B-214ENST00000519540 TXNDC2Q86VQ3 553 aa24.7■■□□□ 1.54
FAM49B-214ENST00000519540 TECPR2O15040 1411 aa24.7■■□□□ 1.54
FAM49B-214ENST00000519540 NUDCQ9Y266 331 aa24.69■■□□□ 1.54
FAM49B-214ENST00000519540 SLIT1O75093 1534 aa24.69■■□□□ 1.54
FAM49B-214ENST00000519540 WDR43Q15061 677 aaKnown RBP eCLIP24.69■■□□□ 1.54
FAM49B-214ENST00000519540 A0A1W2PP64 1363 aa24.68■■□□□ 1.54
FAM49B-214ENST00000519540 ARHGAP23Q9P227 1491 aa24.68■■□□□ 1.54
FAM49B-214ENST00000519540 FAM135BQ49AJ0 1406 aa24.68■■□□□ 1.54
FAM49B-214ENST00000519540 EID1Q9Y6B2 187 aa24.68■■□□□ 1.54
FAM49B-214ENST00000519540 NSD2O96028 1365 aa24.67■■□□□ 1.54
FAM49B-214ENST00000519540 TERF2IPQ9NYB0 399 aa24.66■■□□□ 1.54
FAM49B-214ENST00000519540 CPS1P31327 1500 aa24.66■■□□□ 1.54
FAM49B-214ENST00000519540 THEMISQ8N1K5 641 aaPredicted RBP24.66■■□□□ 1.54
FAM49B-214ENST00000519540 CD163L1Q9NR16 1453 aa24.65■■□□□ 1.54
FAM49B-214ENST00000519540 MED14O60244 1454 aa24.64■■□□□ 1.54
FAM49B-214ENST00000519540 SALL2Q9Y467 1007 aaPredicted RBP24.63■■□□□ 1.53
FAM49B-214ENST00000519540 POLR3AO14802 1390 aaPredicted RBP24.63■■□□□ 1.53
FAM49B-214ENST00000519540 CABP1Q9NZU7 370 aa24.62■■□□□ 1.53
FAM49B-214ENST00000519540 RIMS1Q86UR5 1692 aaKnown RBP24.62■■□□□ 1.53
FAM49B-214ENST00000519540 WASLO00401 505 aaPredicted RBP24.61■■□□□ 1.53
FAM49B-214ENST00000519540 PDE3BQ13370 1112 aa24.61■■□□□ 1.53
FAM49B-214ENST00000519540 TNNT2P45379 298 aaPredicted RBP24.61■■□□□ 1.53
FAM49B-214ENST00000519540 HDGFL2Q7Z4V5 671 aaPredicted RBP24.6■■□□□ 1.53
FAM49B-214ENST00000519540 ROBO2Q9HCK4 1378 aa24.59■■□□□ 1.53
FAM49B-214ENST00000519540 SLC26A8Q96RN1 970 aa24.58■■□□□ 1.53
FAM49B-214ENST00000519540 ADAMTSL3P82987 1691 aa24.56■■□□□ 1.52
FAM49B-214ENST00000519540 TBX22Q9Y458 520 aa24.56■■□□□ 1.52
FAM49B-214ENST00000519540 ATP7BP35670 1465 aa24.56■■□□□ 1.52
FAM49B-214ENST00000519540 IRX6P78412 446 aaPredicted RBP24.56■■□□□ 1.52
FAM49B-214ENST00000519540 CEP170BQ9Y4F5 1589 aaPredicted RBP24.55■■□□□ 1.52
FAM49B-214ENST00000519540 FYB1O15117 783 aa24.55■■□□□ 1.52
FAM49B-214ENST00000519540 PTPRUQ92729 1446 aa24.55■■□□□ 1.52
FAM49B-214ENST00000519540 MTHFSP49914 203 aa24.54■■□□□ 1.52
FAM49B-214ENST00000519540 GGNBP2Q9H3C7 697 aa24.53■■□□□ 1.52
FAM49B-214ENST00000519540 ANKRD26Q9UPS8 1709 aa24.52■■□□□ 1.52
FAM49B-214ENST00000519540 ERICH6BQ5W0A0 696 aa24.52■■□□□ 1.52
FAM49B-214ENST00000519540 NUDT16Q96DE0 195 aaKnown RBP24.52■■□□□ 1.52
FAM49B-214ENST00000519540 RNF123Q5XPI4 1314 aa24.51■■□□□ 1.51
FAM49B-214ENST00000519540 CDCA7LQ96GN5 454 aa24.51■■□□□ 1.51
FAM49B-214ENST00000519540 SHPRHQ149N8 1683 aa24.51■■□□□ 1.51
FAM49B-214ENST00000519540 PPIP5K1Q6PFW1 1433 aa24.51■■□□□ 1.51
FAM49B-214ENST00000519540 DIP2AQ14689 1571 aa24.5■■□□□ 1.51
FAM49B-214ENST00000519540 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.5■■□□□ 1.51
FAM49B-214ENST00000519540 CCDC146Q8IYE0 955 aa24.49■■□□□ 1.51
FAM49B-214ENST00000519540 CFAP53Q96M91 514 aa24.49■■□□□ 1.51
FAM49B-214ENST00000519540 AMOTL2Q9Y2J4 779 aa24.49■■□□□ 1.51
FAM49B-214ENST00000519540 CPSF1Q10570 1443 aaKnown RBP24.49■■□□□ 1.51
FAM49B-214ENST00000519540 CCDC61Q9Y6R9 512 aa24.49■■□□□ 1.51
FAM49B-214ENST00000519540 ADGRB2O60241 1585 aa24.49■■□□□ 1.51
FAM49B-214ENST00000519540 KIF20BQ96Q89 1820 aa24.47■■□□□ 1.51
FAM49B-214ENST00000519540 ZNF521Q96K83 1311 aa24.46■■□□□ 1.51
FAM49B-214ENST00000519540 ZNF142P52746 1687 aaPredicted RBP24.45■■□□□ 1.5
FAM49B-214ENST00000519540 PRR36Q9H6K5 1346 aa24.45■■□□□ 1.5
FAM49B-214ENST00000519540 NCKAP5LQ9HCH0 1330 aa24.45■■□□□ 1.5
FAM49B-214ENST00000519540 APAF1O14727 1248 aa24.44■■□□□ 1.5
FAM49B-214ENST00000519540 CDC42BPGQ6DT37 1551 aa24.44■■□□□ 1.5
FAM49B-214ENST00000519540 PTCH1Q13635 1447 aa24.43■■□□□ 1.5
FAM49B-214ENST00000519540 EDC4Q6P2E9 1401 aaKnown RBP24.43■■□□□ 1.5
FAM49B-214ENST00000519540 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.43■■□□□ 1.5
FAM49B-214ENST00000519540 SETD1BQ9UPS6 1966 aaKnown RBP24.42■■□□□ 1.5
FAM49B-214ENST00000519540 PELP1Q8IZL8 1130 aaKnown RBP24.41■■□□□ 1.5
FAM49B-214ENST00000519540 NGEFQ8N5V2 710 aa24.41■■□□□ 1.5
FAM49B-214ENST00000519540 RCAN3Q9UKA8 241 aa24.4■■□□□ 1.5
FAM49B-214ENST00000519540 ANKLE2Q86XL3 938 aa24.4■■□□□ 1.5
FAM49B-214ENST00000519540 XRN1Q8IZH2 1706 aaKnown RBP24.4■■□□□ 1.5
FAM49B-214ENST00000519540 PIK3R4Q99570 1358 aa24.39■■□□□ 1.5
FAM49B-214ENST00000519540 AKAP12Q02952 1782 aa24.39■■□□□ 1.49
FAM49B-214ENST00000519540 MON2Q7Z3U7 1717 aa24.39■■□□□ 1.49
FAM49B-214ENST00000519540 GOLGA2Q08379 1002 aa24.39■■□□□ 1.49
FAM49B-214ENST00000519540 ZNF692Q9BU19 519 aaPredicted RBP24.39■■□□□ 1.49
FAM49B-214ENST00000519540 PPP4R2Q9NY27 417 aa24.38■■□□□ 1.49
FAM49B-214ENST00000519540 RUNDC1Q96C34 613 aa24.37■■□□□ 1.49
FAM49B-214ENST00000519540 ITSN1Q15811 1721 aa24.37■■□□□ 1.49
FAM49B-214ENST00000519540 TOPAZ1Q8N9V7 1692 aa24.36■■□□□ 1.49
FAM49B-214ENST00000519540 COL3A1P02461 1466 aaPredicted RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms