RNA–Protein interactions for RNA: ENST00000519442.1

SOX30-203, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SOX30, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-203ENST00000519442 TMC1Q8TDI8 760 aa18.16■□□□□ 0.5
SOX30-203ENST00000519442 PARD3Q8TEW0 1356 aa18.16■□□□□ 0.5
SOX30-203ENST00000519442 ZNF142P52746 1687 aaPredicted RBP18.16■□□□□ 0.5
SOX30-203ENST00000519442 TECPR2O15040 1411 aa18.16■□□□□ 0.5
SOX30-203ENST00000519442 SRPK2P78362 688 aaKnown RBP18.15■□□□□ 0.5
SOX30-203ENST00000519442 WAPLQ7Z5K2 1190 aa18.15■□□□□ 0.5
SOX30-203ENST00000519442 SETD1BQ9UPS6 1966 aaKnown RBP18.15■□□□□ 0.5
SOX30-203ENST00000519442 MED14O60244 1454 aa18.15■□□□□ 0.5
SOX30-203ENST00000519442 SIRT1Q96EB6 747 aa18.15■□□□□ 0.5
SOX30-203ENST00000519442 SLC26A8Q96RN1 970 aa18.15■□□□□ 0.5
SOX30-203ENST00000519442 CABP2Q9NPB3 220 aa18.15■□□□□ 0.5
SOX30-203ENST00000519442 KNDC1Q76NI1 1749 aa18.14■□□□□ 0.5
SOX30-203ENST00000519442 PLEKHH1Q9ULM0 1364 aa18.14■□□□□ 0.49
SOX30-203ENST00000519442 FAM135BQ49AJ0 1406 aa18.14■□□□□ 0.49
SOX30-203ENST00000519442 TBX22Q9Y458 520 aa18.13■□□□□ 0.49
SOX30-203ENST00000519442 CPS1P31327 1500 aa18.13■□□□□ 0.49
SOX30-203ENST00000519442 ATAD2Q6PL18 1390 aa18.13■□□□□ 0.49
SOX30-203ENST00000519442 SLC12A5Q9H2X9 1139 aa18.12■□□□□ 0.49
SOX30-203ENST00000519442 DIP2AQ14689 1571 aa18.12■□□□□ 0.49
SOX30-203ENST00000519442 AMER1Q5JTC6 1135 aaPredicted RBP18.12■□□□□ 0.49
SOX30-203ENST00000519442 ANKLE2Q86XL3 938 aa18.12■□□□□ 0.49
SOX30-203ENST00000519442 NINLQ9Y2I6 1382 aa18.11■□□□□ 0.49
SOX30-203ENST00000519442 CDK19Q9BWU1 502 aa18.11■□□□□ 0.49
SOX30-203ENST00000519442 BRD4O60885 1362 aaPredicted RBP18.1■□□□□ 0.49
SOX30-203ENST00000519442 NPC1L1Q9UHC9 1359 aa18.1■□□□□ 0.49
SOX30-203ENST00000519442 NLRP13Q86W25 1043 aa18.09■□□□□ 0.49
SOX30-203ENST00000519442 FAM9BQ8IZU0 186 aa18.09■□□□□ 0.49
SOX30-203ENST00000519442 CARD14Q9BXL6 1004 aa18.09■□□□□ 0.49
SOX30-203ENST00000519442 ANKRD36BQ8N2N9 1353 aa18.08■□□□□ 0.49
SOX30-203ENST00000519442 ROBO2Q9HCK4 1378 aa18.08■□□□□ 0.48
SOX30-203ENST00000519442 PTPRUQ92729 1446 aa18.08■□□□□ 0.48
SOX30-203ENST00000519442 NSD3Q9BZ95 1437 aa18.08■□□□□ 0.48
SOX30-203ENST00000519442 AMOTL2Q9Y2J4 779 aa18.06■□□□□ 0.48
SOX30-203ENST00000519442 WASLO00401 505 aaPredicted RBP18.06■□□□□ 0.48
SOX30-203ENST00000519442 PIAS4Q8N2W9 510 aaPredicted RBP18.05■□□□□ 0.48
SOX30-203ENST00000519442 PIK3R4Q99570 1358 aa18.04■□□□□ 0.48
SOX30-203ENST00000519442 PTCH1Q13635 1447 aa18.03■□□□□ 0.48
SOX30-203ENST00000519442 HNRNPUQ00839 825 aaKnown RBP eCLIP18.03■□□□□ 0.48
SOX30-203ENST00000519442 TERF2IPQ9NYB0 399 aa18.03■□□□□ 0.48
SOX30-203ENST00000519442 A0A1W2PP64 1363 aa18.02■□□□□ 0.48
SOX30-203ENST00000519442 CGNL1Q0VF96 1302 aa18.02■□□□□ 0.48
SOX30-203ENST00000519442 PNISRQ8TF01 805 aaKnown RBP18.02■□□□□ 0.47
SOX30-203ENST00000519442 HDGFL2Q7Z4V5 671 aaPredicted RBP18.01■□□□□ 0.47
SOX30-203ENST00000519442 PPP2R1AP30153 589 aa18■□□□□ 0.47
SOX30-203ENST00000519442 CABP1Q9NZU7 370 aa18■□□□□ 0.47
SOX30-203ENST00000519442 USP32Q8NFA0 1604 aa18■□□□□ 0.47
SOX30-203ENST00000519442 ADGRB2O60241 1585 aa17.99■□□□□ 0.47
SOX30-203ENST00000519442 NPHP4O75161 1426 aaPredicted RBP17.99■□□□□ 0.47
SOX30-203ENST00000519442 XRN1Q8IZH2 1706 aaKnown RBP17.99■□□□□ 0.47
SOX30-203ENST00000519442 NSD2O96028 1365 aa17.98■□□□□ 0.47
SOX30-203ENST00000519442 CD163L1Q9NR16 1453 aa17.98■□□□□ 0.47
SOX30-203ENST00000519442 NUDT16Q96DE0 195 aaKnown RBP17.97■□□□□ 0.47
SOX30-203ENST00000519442 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.97■□□□□ 0.47
SOX30-203ENST00000519442 ATP7BP35670 1465 aa17.97■□□□□ 0.47
SOX30-203ENST00000519442 KCNA6P17658 529 aa17.96■□□□□ 0.47
SOX30-203ENST00000519442 MORC1Q86VD1 984 aa17.96■□□□□ 0.47
SOX30-203ENST00000519442 PPIP5K1Q6PFW1 1433 aa17.96■□□□□ 0.47
SOX30-203ENST00000519442 CCDC61Q9Y6R9 512 aa17.96■□□□□ 0.47
SOX30-203ENST00000519442 NCKAP5LQ9HCH0 1330 aa17.95■□□□□ 0.46
SOX30-203ENST00000519442 PRR36Q9H6K5 1346 aa17.92■□□□□ 0.46
SOX30-203ENST00000519442 ZBED9Q6R2W3 1325 aa17.91■□□□□ 0.46
SOX30-203ENST00000519442 CPSF1Q10570 1443 aaKnown RBP17.91■□□□□ 0.46
SOX30-203ENST00000519442 CHD2O14647 1828 aaKnown RBP17.9■□□□□ 0.46
SOX30-203ENST00000519442 LMTK3Q96Q04 1460 aa17.9■□□□□ 0.46
SOX30-203ENST00000519442 CDC42BPGQ6DT37 1551 aa17.89■□□□□ 0.46
SOX30-203ENST00000519442 NUTM2FA1L443 756 aa17.89■□□□□ 0.45
SOX30-203ENST00000519442 TNNT2P45379 298 aaPredicted RBP17.89■□□□□ 0.45
SOX30-203ENST00000519442 FYB1O15117 783 aa17.88■□□□□ 0.45
SOX30-203ENST00000519442 WDR43Q15061 677 aaKnown RBP eCLIP17.88■□□□□ 0.45
SOX30-203ENST00000519442 GGNBP2Q9H3C7 697 aa17.88■□□□□ 0.45
SOX30-203ENST00000519442 EDC4Q6P2E9 1401 aaKnown RBP17.88■□□□□ 0.45
SOX30-203ENST00000519442 ZNF692Q9BU19 519 aaPredicted RBP17.87■□□□□ 0.45
SOX30-203ENST00000519442 INSRP06213 1382 aa17.87■□□□□ 0.45
SOX30-203ENST00000519442 HSPA2P54652 639 aa17.87■□□□□ 0.45
SOX30-203ENST00000519442 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.87■□□□□ 0.45
SOX30-203ENST00000519442 TOPAZ1Q8N9V7 1692 aa17.85■□□□□ 0.45
SOX30-203ENST00000519442 POLR3AO14802 1390 aaPredicted RBP17.85■□□□□ 0.45
SOX30-203ENST00000519442 PLEKHG3A1L390 1219 aa17.85■□□□□ 0.45
SOX30-203ENST00000519442 GTF3C3Q9Y5Q9 886 aa17.84■□□□□ 0.45
SOX30-203ENST00000519442 NWD1Q149M9 1564 aa17.83■□□□□ 0.45
SOX30-203ENST00000519442 ANKARQ7Z5J8 1434 aa17.83■□□□□ 0.44
SOX30-203ENST00000519442 ACEP12821 1306 aa17.83■□□□□ 0.44
SOX30-203ENST00000519442 ADAMTS8Q9UP79 889 aa17.83■□□□□ 0.44
SOX30-203ENST00000519442 ITSN1Q15811 1721 aa17.82■□□□□ 0.44
SOX30-203ENST00000519442 ANKRD26Q9UPS8 1709 aa17.82■□□□□ 0.44
SOX30-203ENST00000519442 BLMP54132 1417 aaPredicted RBP17.82■□□□□ 0.44
SOX30-203ENST00000519442 SCAF1Q9H7N4 1312 aaKnown RBP17.82■□□□□ 0.44
SOX30-203ENST00000519442 KIF20BQ96Q89 1820 aa17.82■□□□□ 0.44
SOX30-203ENST00000519442 MTHFSP49914 203 aa17.82■□□□□ 0.44
SOX30-203ENST00000519442 CFAP53Q96M91 514 aa17.82■□□□□ 0.44
SOX30-203ENST00000519442 MON2Q7Z3U7 1717 aa17.82■□□□□ 0.44
SOX30-203ENST00000519442 NKTRP30414 1462 aaKnown RBP17.82■□□□□ 0.44
SOX30-203ENST00000519442 AKAP12Q02952 1782 aa17.81■□□□□ 0.44
SOX30-203ENST00000519442 ADGRL3Q9HAR2 1447 aa17.81■□□□□ 0.44
SOX30-203ENST00000519442 RBM33Q96EV2 1170 aaKnown RBP17.8■□□□□ 0.44
SOX30-203ENST00000519442 NALCNQ8IZF0 1738 aa17.8■□□□□ 0.44
SOX30-203ENST00000519442 FMN2Q9NZ56 1722 aa17.79■□□□□ 0.44
SOX30-203ENST00000519442 C14orf37Q86TY3 774 aa17.79■□□□□ 0.44
SOX30-203ENST00000519442 NME9Q86XW9 330 aa17.79■□□□□ 0.44
SOX30-203ENST00000519442 PMFBP1Q8TBY8 1022 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms