RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 NPHP4O75161 1426 aaPredicted RBP16.98■□□□□ 0.31
SPIDR-209ENST00000519141 EVC2Q86UK5 1308 aa16.98■□□□□ 0.31
SPIDR-209ENST00000519141 SAFB2Q14151 953 aaKnown RBP eCLIP16.97■□□□□ 0.31
SPIDR-209ENST00000519141 IQSEC2Q5JU85 1478 aa16.96■□□□□ 0.31
SPIDR-209ENST00000519141 PANK3Q9H999 370 aa16.96■□□□□ 0.31
SPIDR-209ENST00000519141 FAM135BQ49AJ0 1406 aa16.95■□□□□ 0.3
SPIDR-209ENST00000519141 YTHDC1Q96MU7 727 aaKnown RBP16.94■□□□□ 0.3
SPIDR-209ENST00000519141 PUS7Q96PZ0 661 aaKnown RBP16.94■□□□□ 0.3
SPIDR-209ENST00000519141 KTN1Q86UP2 1357 aaKnown RBP16.94■□□□□ 0.3
SPIDR-209ENST00000519141 MINK1Q8N4C8 1332 aaPredicted RBP16.93■□□□□ 0.3
SPIDR-209ENST00000519141 PER1O15534 1290 aaPredicted RBP16.93■□□□□ 0.3
SPIDR-209ENST00000519141 SLC26A8Q96RN1 970 aa16.93■□□□□ 0.3
SPIDR-209ENST00000519141 TBX22Q9Y458 520 aa16.93■□□□□ 0.3
SPIDR-209ENST00000519141 SIRT1Q96EB6 747 aa16.92■□□□□ 0.3
SPIDR-209ENST00000519141 PLEKHH1Q9ULM0 1364 aa16.91■□□□□ 0.3
SPIDR-209ENST00000519141 CNGB1Q14028 1251 aaPredicted RBP16.91■□□□□ 0.3
SPIDR-209ENST00000519141 WAPLQ7Z5K2 1190 aa16.9■□□□□ 0.3
SPIDR-209ENST00000519141 XRN1Q8IZH2 1706 aaKnown RBP16.9■□□□□ 0.3
SPIDR-209ENST00000519141 SRPK2P78362 688 aaKnown RBP16.89■□□□□ 0.29
SPIDR-209ENST00000519141 RALBP1Q15311 655 aa16.89■□□□□ 0.29
SPIDR-209ENST00000519141 KNSTRNQ9Y448 316 aa16.89■□□□□ 0.29
SPIDR-209ENST00000519141 ATAD2Q6PL18 1390 aa16.89■□□□□ 0.29
SPIDR-209ENST00000519141 PTPRUQ92729 1446 aa16.89■□□□□ 0.29
SPIDR-209ENST00000519141 NINLQ9Y2I6 1382 aa16.88■□□□□ 0.29
SPIDR-209ENST00000519141 PTCH1Q13635 1447 aa16.88■□□□□ 0.29
SPIDR-209ENST00000519141 PARD3Q8TEW0 1356 aa16.88■□□□□ 0.29
SPIDR-209ENST00000519141 PIK3R4Q99570 1358 aa16.88■□□□□ 0.29
SPIDR-209ENST00000519141 ROBO2Q9HCK4 1378 aa16.88■□□□□ 0.29
SPIDR-209ENST00000519141 TMC1Q8TDI8 760 aa16.88■□□□□ 0.29
SPIDR-209ENST00000519141 CABP2Q9NPB3 220 aa16.88■□□□□ 0.29
SPIDR-209ENST00000519141 ADGRB2O60241 1585 aa16.87■□□□□ 0.29
SPIDR-209ENST00000519141 STRCP1A6NGW2 1772 aa16.86■□□□□ 0.29
SPIDR-209ENST00000519141 CENPBP07199 599 aaPredicted RBP16.85■□□□□ 0.29
SPIDR-209ENST00000519141 MYBBP1AQ9BQG0 1328 aaKnown RBP16.85■□□□□ 0.29
SPIDR-209ENST00000519141 UBAP1LF5GYI3 381 aa16.85■□□□□ 0.29
SPIDR-209ENST00000519141 CC2D1BQ5T0F9 858 aaKnown RBP16.85■□□□□ 0.29
SPIDR-209ENST00000519141 CDK19Q9BWU1 502 aa16.85■□□□□ 0.29
SPIDR-209ENST00000519141 SLC12A5Q9H2X9 1139 aa16.85■□□□□ 0.29
SPIDR-209ENST00000519141 MRS2Q9HD23 443 aa16.85■□□□□ 0.29
SPIDR-209ENST00000519141 AMOTL2Q9Y2J4 779 aa16.85■□□□□ 0.29
SPIDR-209ENST00000519141 USP32Q8NFA0 1604 aa16.84■□□□□ 0.29
SPIDR-209ENST00000519141 NPC1L1Q9UHC9 1359 aa16.84■□□□□ 0.29
SPIDR-209ENST00000519141 CHD2O14647 1828 aaKnown RBP16.84■□□□□ 0.29
SPIDR-209ENST00000519141 ANKRD36BQ8N2N9 1353 aa16.83■□□□□ 0.29
SPIDR-209ENST00000519141 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.83■□□□□ 0.29
SPIDR-209ENST00000519141 AMER1Q5JTC6 1135 aaPredicted RBP16.82■□□□□ 0.28
SPIDR-209ENST00000519141 NSD3Q9BZ95 1437 aa16.82■□□□□ 0.28
SPIDR-209ENST00000519141 WASLO00401 505 aaPredicted RBP16.81■□□□□ 0.28
SPIDR-209ENST00000519141 CCDC184Q52MB2 194 aa16.81■□□□□ 0.28
SPIDR-209ENST00000519141 CARD14Q9BXL6 1004 aa16.81■□□□□ 0.28
SPIDR-209ENST00000519141 LRRC7Q96NW7 1537 aa16.8■□□□□ 0.28
SPIDR-209ENST00000519141 BRD4O60885 1362 aaPredicted RBP16.8■□□□□ 0.28
SPIDR-209ENST00000519141 TOM1O60784 492 aa16.78■□□□□ 0.28
SPIDR-209ENST00000519141 NLRP13Q86W25 1043 aa16.78■□□□□ 0.28
SPIDR-209ENST00000519141 TERF2IPQ9NYB0 399 aa16.78■□□□□ 0.28
SPIDR-209ENST00000519141 ATP7BP35670 1465 aa16.78■□□□□ 0.28
SPIDR-209ENST00000519141 A0A1W2PP64 1363 aa16.78■□□□□ 0.28
SPIDR-209ENST00000519141 KCNA6P17658 529 aa16.77■□□□□ 0.28
SPIDR-209ENST00000519141 CD163L1Q9NR16 1453 aa16.77■□□□□ 0.27
SPIDR-209ENST00000519141 CGNL1Q0VF96 1302 aa16.76■□□□□ 0.27
SPIDR-209ENST00000519141 TOPAZ1Q8N9V7 1692 aa16.76■□□□□ 0.27
SPIDR-209ENST00000519141 ITSN1Q15811 1721 aa16.75■□□□□ 0.27
SPIDR-209ENST00000519141 NWD1Q149M9 1564 aa16.75■□□□□ 0.27
SPIDR-209ENST00000519141 PPIP5K1Q6PFW1 1433 aa16.75■□□□□ 0.27
SPIDR-209ENST00000519141 HDGFL2Q7Z4V5 671 aaPredicted RBP16.75■□□□□ 0.27
SPIDR-209ENST00000519141 CABP1Q9NZU7 370 aa16.75■□□□□ 0.27
SPIDR-209ENST00000519141 NSD2O96028 1365 aa16.74■□□□□ 0.27
SPIDR-209ENST00000519141 CDC42BPGQ6DT37 1551 aa16.74■□□□□ 0.27
SPIDR-209ENST00000519141 NUDT16Q96DE0 195 aaKnown RBP16.74■□□□□ 0.27
SPIDR-209ENST00000519141 PIP4K2BP78356 416 aa16.73■□□□□ 0.27
SPIDR-209ENST00000519141 FAM9BQ8IZU0 186 aa16.73■□□□□ 0.27
SPIDR-209ENST00000519141 KIF20BQ96Q89 1820 aa16.73■□□□□ 0.27
SPIDR-209ENST00000519141 NALCNQ8IZF0 1738 aa16.73■□□□□ 0.27
SPIDR-209ENST00000519141 ANKRD26Q9UPS8 1709 aa16.73■□□□□ 0.27
SPIDR-209ENST00000519141 CCDC61Q9Y6R9 512 aa16.72■□□□□ 0.27
SPIDR-209ENST00000519141 AKAP12Q02952 1782 aa16.72■□□□□ 0.27
SPIDR-209ENST00000519141 XIRP1Q702N8 1843 aaKnown RBP16.72■□□□□ 0.27
SPIDR-209ENST00000519141 MON2Q7Z3U7 1717 aa16.72■□□□□ 0.27
SPIDR-209ENST00000519141 SCAF1Q9H7N4 1312 aaKnown RBP16.72■□□□□ 0.27
SPIDR-209ENST00000519141 FMN2Q9NZ56 1722 aa16.71■□□□□ 0.27
SPIDR-209ENST00000519141 PPP2R1AP30153 589 aa16.71■□□□□ 0.27
SPIDR-209ENST00000519141 PRR36Q9H6K5 1346 aa16.71■□□□□ 0.27
SPIDR-209ENST00000519141 CPSF1Q10570 1443 aaKnown RBP16.69■□□□□ 0.26
SPIDR-209ENST00000519141 TMEM94Q12767 1356 aa16.69■□□□□ 0.26
SPIDR-209ENST00000519141 MORC1Q86VD1 984 aa16.69■□□□□ 0.26
SPIDR-209ENST00000519141 NKTRP30414 1462 aaKnown RBP16.69■□□□□ 0.26
SPIDR-209ENST00000519141 PNISRQ8TF01 805 aaKnown RBP16.69■□□□□ 0.26
SPIDR-209ENST00000519141 PROSER2Q86WR7 435 aaPredicted RBP16.68■□□□□ 0.26
SPIDR-209ENST00000519141 RBM33Q96EV2 1170 aaKnown RBP16.68■□□□□ 0.26
SPIDR-209ENST00000519141 EDC4Q6P2E9 1401 aaKnown RBP16.67■□□□□ 0.26
SPIDR-209ENST00000519141 ANKARQ7Z5J8 1434 aa16.67■□□□□ 0.26
SPIDR-209ENST00000519141 ADGRL3Q9HAR2 1447 aa16.67■□□□□ 0.26
SPIDR-209ENST00000519141 RGPD8O14715 1765 aaPredicted RBP16.67■□□□□ 0.26
SPIDR-209ENST00000519141 HSPA1LP34931 641 aa16.67■□□□□ 0.26
SPIDR-209ENST00000519141 HNRNPUQ00839 825 aaKnown RBP eCLIP16.67■□□□□ 0.26
SPIDR-209ENST00000519141 NUTM2FA1L443 756 aa16.65■□□□□ 0.26
SPIDR-209ENST00000519141 NRKQ7Z2Y5 1582 aa16.64■□□□□ 0.25
SPIDR-209ENST00000519141 PLEKHG3A1L390 1219 aa16.63■□□□□ 0.25
SPIDR-209ENST00000519141 ZNF692Q9BU19 519 aaPredicted RBP16.63■□□□□ 0.25
SPIDR-209ENST00000519141 FYB1O15117 783 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms