RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 GJD4Q96KN9 370 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-212ENST00000518919 SMARCA2P51531 1590 aa7.78□□□□□ -1.16
CTNNA1-212ENST00000518919 POTEB2H3BUK9 544 aa7.77□□□□□ -1.17
CTNNA1-212ENST00000518919 SLC4A3P48751 1232 aa7.77□□□□□ -1.17
CTNNA1-212ENST00000518919 TSC1Q92574 1164 aa7.77□□□□□ -1.17
CTNNA1-212ENST00000518919 HLA-CQ95604 372 aa7.77□□□□□ -1.17
CTNNA1-212ENST00000518919 HMX1Q9NP08 348 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-212ENST00000518919 PCDHGC3Q9UN70 934 aa7.77□□□□□ -1.17
CTNNA1-212ENST00000518919 SLC10A3P09131 477 aa7.76□□□□□ -1.17
CTNNA1-212ENST00000518919 IRF5Q13568 498 aa7.76□□□□□ -1.17
CTNNA1-212ENST00000518919 MTMR2Q13614 643 aa7.76□□□□□ -1.17
CTNNA1-212ENST00000518919 WASHC4Q2M389 1173 aa7.76□□□□□ -1.17
CTNNA1-212ENST00000518919 ZBED2Q9BTP6 218 aa7.76□□□□□ -1.17
CTNNA1-212ENST00000518919 CCDC88BA6NC98 1476 aa7.75□□□□□ -1.17
CTNNA1-212ENST00000518919 SEPT9Q9UHD8 586 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-212ENST00000518919 CTDSPL2Q05D32 466 aa7.74□□□□□ -1.17
CTNNA1-212ENST00000518919 TRIM34Q9BYJ4 488 aa7.74□□□□□ -1.17
CTNNA1-212ENST00000518919 ACIN1Q9UKV3 1341 aaKnown RBP7.74□□□□□ -1.17
CTNNA1-212ENST00000518919 C6orf229H3BNL8 230 aa7.73□□□□□ -1.17
CTNNA1-212ENST00000518919 HDGFP51858 240 aaKnown RBP7.73□□□□□ -1.17
CTNNA1-212ENST00000518919 PDE4CQ08493 712 aa7.73□□□□□ -1.17
CTNNA1-212ENST00000518919 GRIPAP1Q4V328 841 aa7.73□□□□□ -1.17
CTNNA1-212ENST00000518919 HDGFL1Q5TGJ6 251 aa7.73□□□□□ -1.17
CTNNA1-212ENST00000518919 ADAMTS19Q8TE59 1207 aa7.73□□□□□ -1.17
CTNNA1-212ENST00000518919 LRRN4Q8WUT4 740 aa7.73□□□□□ -1.17
CTNNA1-212ENST00000518919 PBXIP1Q96AQ6 731 aa7.73□□□□□ -1.17
CTNNA1-212ENST00000518919 RABGEF1Q9UJ41 708 aa7.73□□□□□ -1.17
CTNNA1-212ENST00000518919 ATAD2BQ9ULI0 1458 aa7.73□□□□□ -1.17
CTNNA1-212ENST00000518919 CFAP99D6REC4 459 aa7.72□□□□□ -1.17
CTNNA1-212ENST00000518919 GPR37L1O60883 481 aa7.72□□□□□ -1.17
CTNNA1-212ENST00000518919 CFHP08603 1231 aa7.72□□□□□ -1.17
CTNNA1-212ENST00000518919 PSEN2P49810 448 aa7.72□□□□□ -1.17
CTNNA1-212ENST00000518919 VAC14Q08AM6 782 aa7.72□□□□□ -1.17
CTNNA1-212ENST00000518919 SLF2Q8IX21 1173 aa7.72□□□□□ -1.17
CTNNA1-212ENST00000518919 FUT2Q10981 343 aa7.71□□□□□ -1.18
CTNNA1-212ENST00000518919 FAM98CQ17RN3 349 aaKnown RBP7.71□□□□□ -1.18
CTNNA1-212ENST00000518919 RNF40O75150 1001 aa7.7□□□□□ -1.18
CTNNA1-212ENST00000518919 RFX1P22670 979 aa7.7□□□□□ -1.18
CTNNA1-212ENST00000518919 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.69□□□□□ -1.18
CTNNA1-212ENST00000518919 ARHGAP33O14559 1287 aa7.68□□□□□ -1.18
CTNNA1-212ENST00000518919 CFAP70Q5T0N1 1121 aa7.68□□□□□ -1.18
CTNNA1-212ENST00000518919 SAMD7Q7Z3H4 446 aa7.68□□□□□ -1.18
CTNNA1-212ENST00000518919 SLC4A5Q9BY07 1137 aa7.68□□□□□ -1.18
CTNNA1-212ENST00000518919 PPP1R12CQ9BZL4 782 aa7.68□□□□□ -1.18
CTNNA1-212ENST00000518919 BAZ1BQ9UIG0 1483 aaKnown RBP7.68□□□□□ -1.18
CTNNA1-212ENST00000518919 CSB-PGBD3P0DP91 1061 aa7.67□□□□□ -1.18
CTNNA1-212ENST00000518919 SOX11P35716 441 aa7.67□□□□□ -1.18
CTNNA1-212ENST00000518919 ATP6V1AP38606 617 aa7.67□□□□□ -1.18
CTNNA1-212ENST00000518919 KMT5BQ4FZB7 885 aa7.67□□□□□ -1.18
CTNNA1-212ENST00000518919 TMCO4Q5TGY1 634 aa7.67□□□□□ -1.18
CTNNA1-212ENST00000518919 PRR7Q8TB68 274 aa7.67□□□□□ -1.18
CTNNA1-212ENST00000518919 EPS8L1Q8TE68 723 aa7.67□□□□□ -1.18
CTNNA1-212ENST00000518919 USTQ9Y2C2 406 aa7.67□□□□□ -1.18
CTNNA1-212ENST00000518919 PATL2C9JE40 543 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-212ENST00000518919 DMRTA1Q5VZB9 504 aa7.66□□□□□ -1.18
CTNNA1-212ENST00000518919 SYMPKQ92797 1274 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-212ENST00000518919 NBPF3Q9H094 633 aa7.66□□□□□ -1.18
CTNNA1-212ENST00000518919 PALM3A6NDB9 673 aaPredicted RBP7.65□□□□□ -1.18
CTNNA1-212ENST00000518919 ERBB3P21860 1342 aa7.65□□□□□ -1.18
CTNNA1-212ENST00000518919 ABCC8Q09428 1581 aa7.65□□□□□ -1.18
CTNNA1-212ENST00000518919 NR6A1Q15406 480 aa7.65□□□□□ -1.18
CTNNA1-212ENST00000518919 VARS2Q5ST30 1063 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-212ENST00000518919 RETREG3Q86VR2 466 aa7.65□□□□□ -1.18
CTNNA1-212ENST00000518919 GZF1Q9H116 711 aaPredicted RBP7.65□□□□□ -1.18
CTNNA1-212ENST00000518919 ALG2Q9H553 416 aa7.65□□□□□ -1.18
CTNNA1-212ENST00000518919 HMGXB3Q12766 1538 aa7.64□□□□□ -1.19
CTNNA1-212ENST00000518919 PBX2P40425 430 aa7.64□□□□□ -1.19
CTNNA1-212ENST00000518919 LAPTM4BQ86VI4 370 aa7.64□□□□□ -1.19
CTNNA1-212ENST00000518919 PNMA1Q8ND90 353 aa7.64□□□□□ -1.19
CTNNA1-212ENST00000518919 UCN2Q96RP3 112 aa7.64□□□□□ -1.19
CTNNA1-212ENST00000518919 AXIN2Q9Y2T1 843 aa7.64□□□□□ -1.19
CTNNA1-212ENST00000518919 LOC105371045A0A1W2PR82 267 aa7.63□□□□□ -1.19
CTNNA1-212ENST00000518919 PER1O15534 1290 aaPredicted RBP7.63□□□□□ -1.19
CTNNA1-212ENST00000518919 LMOD1P29536 600 aaPredicted RBP7.63□□□□□ -1.19
CTNNA1-212ENST00000518919 SEMA3FQ13275 785 aa7.63□□□□□ -1.19
CTNNA1-212ENST00000518919 POTEEQ6S8J3 1075 aa7.63□□□□□ -1.19
CTNNA1-212ENST00000518919 VPS9D1Q9Y2B5 631 aa7.63□□□□□ -1.19
CTNNA1-212ENST00000518919 KCNA1Q09470 495 aa7.62□□□□□ -1.19
CTNNA1-212ENST00000518919 Q3C1V9 767 aa7.62□□□□□ -1.19
CTNNA1-212ENST00000518919 NCAPD3P42695 1498 aa7.62□□□□□ -1.19
CTNNA1-212ENST00000518919 BRD1O95696 1058 aa7.61□□□□□ -1.19
CTNNA1-212ENST00000518919 EIF4G2P78344 907 aaKnown RBP eCLIP7.61□□□□□ -1.19
CTNNA1-212ENST00000518919 SRPK2P78362 688 aaKnown RBP7.61□□□□□ -1.19
CTNNA1-212ENST00000518919 MORN1Q5T089 497 aa7.61□□□□□ -1.19
CTNNA1-212ENST00000518919 TFIP11Q9UBB9 837 aaKnown RBP7.61□□□□□ -1.19
CTNNA1-212ENST00000518919 MFAP1P55081 439 aaKnown RBP7.6□□□□□ -1.19
CTNNA1-212ENST00000518919 PUS10Q3MIT2 529 aaKnown RBP7.6□□□□□ -1.19
CTNNA1-212ENST00000518919 DESI1Q6ICB0 168 aa7.6□□□□□ -1.19
CTNNA1-212ENST00000518919 ZFRQ96KR1 1074 aaKnown RBP7.6□□□□□ -1.19
CTNNA1-212ENST00000518919 SLC27A5Q9Y2P5 690 aa7.6□□□□□ -1.19
CTNNA1-212ENST00000518919 MAFBQ9Y5Q3 323 aaPredicted RBP7.6□□□□□ -1.19
CTNNA1-212ENST00000518919 ACTN4O43707 911 aaKnown RBP7.59□□□□□ -1.19
CTNNA1-212ENST00000518919 LRCH3Q96II8 777 aa7.59□□□□□ -1.19
CTNNA1-212ENST00000518919 PRR14Q9BWN1 585 aa7.59□□□□□ -1.19
CTNNA1-212ENST00000518919 NR1H3Q13133 447 aa7.58□□□□□ -1.2
CTNNA1-212ENST00000518919 CDCA8Q53HL2 280 aa7.58□□□□□ -1.2
CTNNA1-212ENST00000518919 ATP9BO43861 1147 aa7.57□□□□□ -1.2
CTNNA1-212ENST00000518919 ATG7O95352 703 aa7.57□□□□□ -1.2
CTNNA1-212ENST00000518919 EMP3P54852 163 aa7.57□□□□□ -1.2
CTNNA1-212ENST00000518919 LYPD8Q6UX82 237 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms