RNA–Protein interactions for RNA: ENST00000518916.5

MSC-AS1-204, MSC antisense RNA 1, humanhuman

TSL 3 BASIC

Gene MSC-AS1, Length 864 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-204ENST00000518916 DISP3Q9P2K9 1392 aa20.48■□□□□ 0.87
MSC-AS1-204ENST00000518916 C11orf95C9JLR9 678 aaPredicted RBP20.47■□□□□ 0.87
MSC-AS1-204ENST00000518916 UBAP1LF5GYI3 381 aa20.47■□□□□ 0.87
MSC-AS1-204ENST00000518916 PRAM1Q96QH2 718 aa20.47■□□□□ 0.87
MSC-AS1-204ENST00000518916 PTCH1Q13635 1447 aa20.46■□□□□ 0.87
MSC-AS1-204ENST00000518916 NWD1Q149M9 1564 aa20.46■□□□□ 0.87
MSC-AS1-204ENST00000518916 PTPRUQ92729 1446 aa20.45■□□□□ 0.86
MSC-AS1-204ENST00000518916 DDX10Q13206 875 aaKnown RBP20.45■□□□□ 0.86
MSC-AS1-204ENST00000518916 CHD2O14647 1828 aaKnown RBP20.44■□□□□ 0.86
MSC-AS1-204ENST00000518916 TOM1O60784 492 aa20.44■□□□□ 0.86
MSC-AS1-204ENST00000518916 SIRT1Q96EB6 747 aa20.44■□□□□ 0.86
MSC-AS1-204ENST00000518916 SAFB2Q14151 953 aaKnown RBP eCLIP20.43■□□□□ 0.86
MSC-AS1-204ENST00000518916 EVC2Q86UK5 1308 aa20.43■□□□□ 0.86
MSC-AS1-204ENST00000518916 NKTRP30414 1462 aaKnown RBP20.43■□□□□ 0.86
MSC-AS1-204ENST00000518916 XIRP1Q702N8 1843 aaKnown RBP20.42■□□□□ 0.86
MSC-AS1-204ENST00000518916 AMOTL2Q9Y2J4 779 aa20.42■□□□□ 0.86
MSC-AS1-204ENST00000518916 TULP4Q9NRJ4 1543 aa20.42■□□□□ 0.86
MSC-AS1-204ENST00000518916 ROBO2Q9HCK4 1378 aa20.41■□□□□ 0.86
MSC-AS1-204ENST00000518916 MINK1Q8N4C8 1332 aaPredicted RBP20.4■□□□□ 0.86
MSC-AS1-204ENST00000518916 PLEKHH1Q9ULM0 1364 aa20.39■□□□□ 0.85
MSC-AS1-204ENST00000518916 ADGRB2O60241 1585 aa20.38■□□□□ 0.85
MSC-AS1-204ENST00000518916 NCOA3Q9Y6Q9 1424 aa20.38■□□□□ 0.85
MSC-AS1-204ENST00000518916 WAPLQ7Z5K2 1190 aa20.38■□□□□ 0.85
MSC-AS1-204ENST00000518916 MYOM1P52179 1685 aa20.37■□□□□ 0.85
MSC-AS1-204ENST00000518916 TMEM94Q12767 1356 aa20.35■□□□□ 0.85
MSC-AS1-204ENST00000518916 PUS7Q96PZ0 661 aaKnown RBP20.34■□□□□ 0.85
MSC-AS1-204ENST00000518916 ATAD2Q6PL18 1390 aa20.34■□□□□ 0.85
MSC-AS1-204ENST00000518916 SRPK2P78362 688 aaKnown RBP20.33■□□□□ 0.85
MSC-AS1-204ENST00000518916 PROSER2Q86WR7 435 aaPredicted RBP20.33■□□□□ 0.85
MSC-AS1-204ENST00000518916 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.33■□□□□ 0.84
MSC-AS1-204ENST00000518916 NINLQ9Y2I6 1382 aa20.31■□□□□ 0.84
MSC-AS1-204ENST00000518916 NALCNQ8IZF0 1738 aa20.28■□□□□ 0.84
MSC-AS1-204ENST00000518916 WASLO00401 505 aaPredicted RBP20.28■□□□□ 0.84
MSC-AS1-204ENST00000518916 CDK19Q9BWU1 502 aa20.28■□□□□ 0.84
MSC-AS1-204ENST00000518916 CABP2Q9NPB3 220 aa20.28■□□□□ 0.84
MSC-AS1-204ENST00000518916 CDC42BPGQ6DT37 1551 aa20.27■□□□□ 0.84
MSC-AS1-204ENST00000518916 ANP32CO43423 234 aa20.26■□□□□ 0.83
MSC-AS1-204ENST00000518916 ADGRL3Q9HAR2 1447 aa20.26■□□□□ 0.83
MSC-AS1-204ENST00000518916 HSPA1LP34931 641 aa20.25■□□□□ 0.83
MSC-AS1-204ENST00000518916 PIP4K2BP78356 416 aa20.25■□□□□ 0.83
MSC-AS1-204ENST00000518916 TMC1Q8TDI8 760 aa20.25■□□□□ 0.83
MSC-AS1-204ENST00000518916 ITSN1Q15811 1721 aa20.24■□□□□ 0.83
MSC-AS1-204ENST00000518916 MSH6P52701 1360 aa20.23■□□□□ 0.83
MSC-AS1-204ENST00000518916 C14orf37Q86TY3 774 aa20.23■□□□□ 0.83
MSC-AS1-204ENST00000518916 PANK3Q9H999 370 aa20.23■□□□□ 0.83
MSC-AS1-204ENST00000518916 FMN2Q9NZ56 1722 aa20.23■□□□□ 0.83
MSC-AS1-204ENST00000518916 ATP7BP35670 1465 aa20.22■□□□□ 0.83
MSC-AS1-204ENST00000518916 TOPAZ1Q8N9V7 1692 aa20.22■□□□□ 0.83
MSC-AS1-204ENST00000518916 C19orf44Q9H6X5 657 aa20.21■□□□□ 0.83
MSC-AS1-204ENST00000518916 ANKRD36BQ8N2N9 1353 aa20.21■□□□□ 0.83
MSC-AS1-204ENST00000518916 ANKARQ7Z5J8 1434 aa20.2■□□□□ 0.82
MSC-AS1-204ENST00000518916 RBM33Q96EV2 1170 aaKnown RBP20.19■□□□□ 0.82
MSC-AS1-204ENST00000518916 DCCP43146 1447 aa20.19■□□□□ 0.82
MSC-AS1-204ENST00000518916 PPIP5K1Q6PFW1 1433 aa20.19■□□□□ 0.82
MSC-AS1-204ENST00000518916 MIER1Q8N108 512 aa20.18■□□□□ 0.82
MSC-AS1-204ENST00000518916 NUDT16Q96DE0 195 aaKnown RBP20.18■□□□□ 0.82
MSC-AS1-204ENST00000518916 TERF2IPQ9NYB0 399 aa20.18■□□□□ 0.82
MSC-AS1-204ENST00000518916 SLAIN2Q9P270 581 aa20.18■□□□□ 0.82
MSC-AS1-204ENST00000518916 KNSTRNQ9Y448 316 aa20.18■□□□□ 0.82
MSC-AS1-204ENST00000518916 SCAF1Q9H7N4 1312 aaKnown RBP20.18■□□□□ 0.82
MSC-AS1-204ENST00000518916 HDGFL2Q7Z4V5 671 aaPredicted RBP20.17■□□□□ 0.82
MSC-AS1-204ENST00000518916 SLC12A5Q9H2X9 1139 aa20.17■□□□□ 0.82
MSC-AS1-204ENST00000518916 USP32Q8NFA0 1604 aa20.16■□□□□ 0.82
MSC-AS1-204ENST00000518916 CADPS2Q86UW7 1296 aa20.16■□□□□ 0.82
MSC-AS1-204ENST00000518916 CCDC61Q9Y6R9 512 aa20.16■□□□□ 0.82
MSC-AS1-204ENST00000518916 KTN1Q86UP2 1357 aaKnown RBP20.16■□□□□ 0.82
MSC-AS1-204ENST00000518916 NSD3Q9BZ95 1437 aa20.15■□□□□ 0.82
MSC-AS1-204ENST00000518916 A0A1W2PP64 1363 aa20.14■□□□□ 0.81
MSC-AS1-204ENST00000518916 PRR36Q9H6K5 1346 aa20.14■□□□□ 0.81
MSC-AS1-204ENST00000518916 ROBO1Q9Y6N7 1651 aa20.13■□□□□ 0.81
MSC-AS1-204ENST00000518916 CABP1Q9NZU7 370 aa20.13■□□□□ 0.81
MSC-AS1-204ENST00000518916 AKAP12Q02952 1782 aa20.13■□□□□ 0.81
MSC-AS1-204ENST00000518916 NUTM2FA1L443 756 aa20.12■□□□□ 0.81
MSC-AS1-204ENST00000518916 PER1O15534 1290 aaPredicted RBP20.12■□□□□ 0.81
MSC-AS1-204ENST00000518916 CD163L1Q9NR16 1453 aa20.11■□□□□ 0.81
MSC-AS1-204ENST00000518916 RGPD8O14715 1765 aaPredicted RBP20.11■□□□□ 0.81
MSC-AS1-204ENST00000518916 MON2Q7Z3U7 1717 aa20.11■□□□□ 0.81
MSC-AS1-204ENST00000518916 NPC1L1Q9UHC9 1359 aa20.1■□□□□ 0.81
MSC-AS1-204ENST00000518916 PRKRIP1Q9H875 184 aaPredicted RBP20.1■□□□□ 0.81
MSC-AS1-204ENST00000518916 CGNL1Q0VF96 1302 aa20.09■□□□□ 0.81
MSC-AS1-204ENST00000518916 ATF3P18847 181 aa20.09■□□□□ 0.81
MSC-AS1-204ENST00000518916 CNGB1Q14028 1251 aaPredicted RBP20.09■□□□□ 0.81
MSC-AS1-204ENST00000518916 RALBP1Q15311 655 aa20.08■□□□□ 0.81
MSC-AS1-204ENST00000518916 CARD14Q9BXL6 1004 aa20.08■□□□□ 0.81
MSC-AS1-204ENST00000518916 KIF20BQ96Q89 1820 aa20.08■□□□□ 0.8
MSC-AS1-204ENST00000518916 CPSF1Q10570 1443 aaKnown RBP20.08■□□□□ 0.8
MSC-AS1-204ENST00000518916 NSD2O96028 1365 aa20.08■□□□□ 0.8
MSC-AS1-204ENST00000518916 EDC4Q6P2E9 1401 aaKnown RBP20.07■□□□□ 0.8
MSC-AS1-204ENST00000518916 PLEKHG3A1L390 1219 aa20.06■□□□□ 0.8
MSC-AS1-204ENST00000518916 AMER1Q5JTC6 1135 aaPredicted RBP20.06■□□□□ 0.8
MSC-AS1-204ENST00000518916 CC2D1BQ5T0F9 858 aaKnown RBP20.06■□□□□ 0.8
MSC-AS1-204ENST00000518916 KIF1AQ12756 1690 aa20.06■□□□□ 0.8
MSC-AS1-204ENST00000518916 CCER2I3L3R5 266 aa20.05■□□□□ 0.8
MSC-AS1-204ENST00000518916 ZNF692Q9BU19 519 aaPredicted RBP20.05■□□□□ 0.8
MSC-AS1-204ENST00000518916 PARD3Q8TEW0 1356 aa20.05■□□□□ 0.8
MSC-AS1-204ENST00000518916 ANKRD26Q9UPS8 1709 aa20.05■□□□□ 0.8
MSC-AS1-204ENST00000518916 NRKQ7Z2Y5 1582 aa20.04■□□□□ 0.8
MSC-AS1-204ENST00000518916 MST1RQ04912 1400 aa20.04■□□□□ 0.8
MSC-AS1-204ENST00000518916 AHDC1Q5TGY3 1603 aaPredicted RBP20.04■□□□□ 0.8
MSC-AS1-204ENST00000518916 ACEP12821 1306 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms