RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 PIK3R4Q99570 1358 aa20.55■□□□□ 0.88
TRAPPC9-205ENST00000518839 KNSTRNQ9Y448 316 aa20.54■□□□□ 0.88
TRAPPC9-205ENST00000518839 NPC1L1Q9UHC9 1359 aa20.54■□□□□ 0.88
TRAPPC9-205ENST00000518839 PARD3Q8TEW0 1356 aa20.52■□□□□ 0.88
TRAPPC9-205ENST00000518839 SAFB2Q14151 953 aaKnown RBP eCLIP20.52■□□□□ 0.88
TRAPPC9-205ENST00000518839 YTHDC1Q96MU7 727 aaKnown RBP20.52■□□□□ 0.88
TRAPPC9-205ENST00000518839 MINK1Q8N4C8 1332 aaPredicted RBP20.52■□□□□ 0.87
TRAPPC9-205ENST00000518839 MYBBP1AQ9BQG0 1328 aaKnown RBP20.51■□□□□ 0.87
TRAPPC9-205ENST00000518839 USP32Q8NFA0 1604 aa20.5■□□□□ 0.87
TRAPPC9-205ENST00000518839 PTCH1Q13635 1447 aa20.5■□□□□ 0.87
TRAPPC9-205ENST00000518839 ADGRB2O60241 1585 aa20.5■□□□□ 0.87
TRAPPC9-205ENST00000518839 XRN1Q8IZH2 1706 aaKnown RBP20.5■□□□□ 0.87
TRAPPC9-205ENST00000518839 SRPK2P78362 688 aaKnown RBP20.49■□□□□ 0.87
TRAPPC9-205ENST00000518839 SLC26A8Q96RN1 970 aa20.49■□□□□ 0.87
TRAPPC9-205ENST00000518839 PLEKHH1Q9ULM0 1364 aa20.48■□□□□ 0.87
TRAPPC9-205ENST00000518839 WAPLQ7Z5K2 1190 aa20.47■□□□□ 0.87
TRAPPC9-205ENST00000518839 TMC1Q8TDI8 760 aa20.47■□□□□ 0.87
TRAPPC9-205ENST00000518839 MRS2Q9HD23 443 aa20.47■□□□□ 0.87
TRAPPC9-205ENST00000518839 BRD4O60885 1362 aaPredicted RBP20.46■□□□□ 0.87
TRAPPC9-205ENST00000518839 ANKRD36BQ8N2N9 1353 aa20.46■□□□□ 0.87
TRAPPC9-205ENST00000518839 CHD2O14647 1828 aaKnown RBP20.46■□□□□ 0.87
TRAPPC9-205ENST00000518839 PTPRUQ92729 1446 aa20.46■□□□□ 0.87
TRAPPC9-205ENST00000518839 CABP2Q9NPB3 220 aa20.46■□□□□ 0.87
TRAPPC9-205ENST00000518839 ROBO2Q9HCK4 1378 aa20.46■□□□□ 0.87
TRAPPC9-205ENST00000518839 CDK19Q9BWU1 502 aa20.45■□□□□ 0.86
TRAPPC9-205ENST00000518839 AMER1Q5JTC6 1135 aaPredicted RBP20.44■□□□□ 0.86
TRAPPC9-205ENST00000518839 AMOTL2Q9Y2J4 779 aa20.44■□□□□ 0.86
TRAPPC9-205ENST00000518839 NPHP4O75161 1426 aaPredicted RBP20.44■□□□□ 0.86
TRAPPC9-205ENST00000518839 WASLO00401 505 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC9-205ENST00000518839 NLRP13Q86W25 1043 aa20.43■□□□□ 0.86
TRAPPC9-205ENST00000518839 SLC12A5Q9H2X9 1139 aa20.43■□□□□ 0.86
TRAPPC9-205ENST00000518839 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.42■□□□□ 0.86
TRAPPC9-205ENST00000518839 CC2D1BQ5T0F9 858 aaKnown RBP20.42■□□□□ 0.86
TRAPPC9-205ENST00000518839 CNGB1Q14028 1251 aaPredicted RBP20.41■□□□□ 0.86
TRAPPC9-205ENST00000518839 TERF2IPQ9NYB0 399 aa20.41■□□□□ 0.86
TRAPPC9-205ENST00000518839 NSD3Q9BZ95 1437 aa20.41■□□□□ 0.86
TRAPPC9-205ENST00000518839 NSD2O96028 1365 aa20.4■□□□□ 0.86
TRAPPC9-205ENST00000518839 ATP7BP35670 1465 aa20.4■□□□□ 0.86
TRAPPC9-205ENST00000518839 CARD14Q9BXL6 1004 aa20.39■□□□□ 0.85
TRAPPC9-205ENST00000518839 CCDC184Q52MB2 194 aa20.38■□□□□ 0.85
TRAPPC9-205ENST00000518839 HDGFL2Q7Z4V5 671 aaPredicted RBP20.38■□□□□ 0.85
TRAPPC9-205ENST00000518839 CGNL1Q0VF96 1302 aa20.37■□□□□ 0.85
TRAPPC9-205ENST00000518839 ITSN1Q15811 1721 aa20.36■□□□□ 0.85
TRAPPC9-205ENST00000518839 A0A1W2PP64 1363 aa20.35■□□□□ 0.85
TRAPPC9-205ENST00000518839 KDM4FA0A1W2PPD8 638 aa20.35■□□□□ 0.85
TRAPPC9-205ENST00000518839 ANKRD26Q9UPS8 1709 aa20.35■□□□□ 0.85
TRAPPC9-205ENST00000518839 TOPAZ1Q8N9V7 1692 aa20.35■□□□□ 0.85
TRAPPC9-205ENST00000518839 NWD1Q149M9 1564 aa20.34■□□□□ 0.85
TRAPPC9-205ENST00000518839 CD163L1Q9NR16 1453 aa20.34■□□□□ 0.85
TRAPPC9-205ENST00000518839 AKAP12Q02952 1782 aa20.34■□□□□ 0.85
TRAPPC9-205ENST00000518839 CDC42BPGQ6DT37 1551 aa20.34■□□□□ 0.85
TRAPPC9-205ENST00000518839 KIF20BQ96Q89 1820 aa20.33■□□□□ 0.85
TRAPPC9-205ENST00000518839 CCDC61Q9Y6R9 512 aa20.33■□□□□ 0.85
TRAPPC9-205ENST00000518839 PPIP5K1Q6PFW1 1433 aa20.33■□□□□ 0.84
TRAPPC9-205ENST00000518839 NUDT16Q96DE0 195 aaKnown RBP20.32■□□□□ 0.84
TRAPPC9-205ENST00000518839 CABP1Q9NZU7 370 aa20.32■□□□□ 0.84
TRAPPC9-205ENST00000518839 NCKAP5LQ9HCH0 1330 aa20.31■□□□□ 0.84
TRAPPC9-205ENST00000518839 MON2Q7Z3U7 1717 aa20.31■□□□□ 0.84
TRAPPC9-205ENST00000518839 KCNA6P17658 529 aa20.31■□□□□ 0.84
TRAPPC9-205ENST00000518839 PPP2R1AP30153 589 aa20.31■□□□□ 0.84
TRAPPC9-205ENST00000518839 FAM9BQ8IZU0 186 aa20.31■□□□□ 0.84
TRAPPC9-205ENST00000518839 PNISRQ8TF01 805 aaKnown RBP20.3■□□□□ 0.84
TRAPPC9-205ENST00000518839 FMN2Q9NZ56 1722 aa20.29■□□□□ 0.84
TRAPPC9-205ENST00000518839 CPSF1Q10570 1443 aaKnown RBP20.28■□□□□ 0.84
TRAPPC9-205ENST00000518839 MORC1Q86VD1 984 aa20.28■□□□□ 0.84
TRAPPC9-205ENST00000518839 INSRP06213 1382 aa20.28■□□□□ 0.84
TRAPPC9-205ENST00000518839 ANKARQ7Z5J8 1434 aa20.27■□□□□ 0.84
TRAPPC9-205ENST00000518839 ZNF692Q9BU19 519 aaPredicted RBP20.27■□□□□ 0.84
TRAPPC9-205ENST00000518839 NALCNQ8IZF0 1738 aa20.27■□□□□ 0.83
TRAPPC9-205ENST00000518839 EDC4Q6P2E9 1401 aaKnown RBP20.27■□□□□ 0.83
TRAPPC9-205ENST00000518839 NKTRP30414 1462 aaKnown RBP20.26■□□□□ 0.83
TRAPPC9-205ENST00000518839 LMTK3Q96Q04 1460 aa20.26■□□□□ 0.83
TRAPPC9-205ENST00000518839 HNRNPUQ00839 825 aaKnown RBP eCLIP20.25■□□□□ 0.83
TRAPPC9-205ENST00000518839 PRR36Q9H6K5 1346 aa20.25■□□□□ 0.83
TRAPPC9-205ENST00000518839 PLEKHG3A1L390 1219 aa20.23■□□□□ 0.83
TRAPPC9-205ENST00000518839 ADGRL3Q9HAR2 1447 aa20.23■□□□□ 0.83
TRAPPC9-205ENST00000518839 RGPD8O14715 1765 aaPredicted RBP20.21■□□□□ 0.83
TRAPPC9-205ENST00000518839 POLR3AO14802 1390 aaPredicted RBP20.21■□□□□ 0.83
TRAPPC9-205ENST00000518839 NRKQ7Z2Y5 1582 aa20.2■□□□□ 0.82
TRAPPC9-205ENST00000518839 FYB1O15117 783 aa20.19■□□□□ 0.82
TRAPPC9-205ENST00000518839 STRCQ7RTU9 1775 aa20.18■□□□□ 0.82
TRAPPC9-205ENST00000518839 ZBED9Q6R2W3 1325 aa20.18■□□□□ 0.82
TRAPPC9-205ENST00000518839 NCOA3Q9Y6Q9 1424 aa20.17■□□□□ 0.82
TRAPPC9-205ENST00000518839 HSPA2P54652 639 aa20.16■□□□□ 0.82
TRAPPC9-205ENST00000518839 WDR43Q15061 677 aaKnown RBP eCLIP20.16■□□□□ 0.82
TRAPPC9-205ENST00000518839 CFAP53Q96M91 514 aa20.16■□□□□ 0.82
TRAPPC9-205ENST00000518839 GGNBP2Q9H3C7 697 aa20.15■□□□□ 0.82
TRAPPC9-205ENST00000518839 ACEP12821 1306 aa20.15■□□□□ 0.82
TRAPPC9-205ENST00000518839 SCAF1Q9H7N4 1312 aaKnown RBP20.15■□□□□ 0.82
TRAPPC9-205ENST00000518839 USP6P35125 1406 aa20.15■□□□□ 0.82
TRAPPC9-205ENST00000518839 BLMP54132 1417 aaPredicted RBP20.15■□□□□ 0.82
TRAPPC9-205ENST00000518839 PROSER2Q86WR7 435 aaPredicted RBP20.14■□□□□ 0.81
TRAPPC9-205ENST00000518839 STRCP1A6NGW2 1772 aa20.13■□□□□ 0.81
TRAPPC9-205ENST00000518839 TTC21AQ8NDW8 1320 aa20.12■□□□□ 0.81
TRAPPC9-205ENST00000518839 NUTM2FA1L443 756 aa20.12■□□□□ 0.81
TRAPPC9-205ENST00000518839 C14orf37Q86TY3 774 aa20.12■□□□□ 0.81
TRAPPC9-205ENST00000518839 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.12■□□□□ 0.81
TRAPPC9-205ENST00000518839 SHPRHQ149N8 1683 aa20.1■□□□□ 0.81
TRAPPC9-205ENST00000518839 TTC21BQ7Z4L5 1316 aa20.1■□□□□ 0.81
TRAPPC9-205ENST00000518839 TNNT2P45379 298 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms