RNA–Protein interactions for RNA: ENST00000518711.1

SPIDR-208, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-208ENST00000518711 NBPF14Q5TI25 921 aa8.85□□□□□ -0.99
SPIDR-208ENST00000518711 CAMKK2Q96RR4 588 aa8.85□□□□□ -0.99
SPIDR-208ENST00000518711 DISP2A7MBM2 1401 aa8.85□□□□□ -0.99
SPIDR-208ENST00000518711 DCCP43146 1447 aa8.85□□□□□ -0.99
SPIDR-208ENST00000518711 BCANQ96GW7 911 aa8.84□□□□□ -0.99
SPIDR-208ENST00000518711 SYT17Q9BSW7 474 aa8.84□□□□□ -0.99
SPIDR-208ENST00000518711 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.84□□□□□ -0.99
SPIDR-208ENST00000518711 GLI3P10071 1580 aa8.83□□□□□ -1
SPIDR-208ENST00000518711 DAPK1P53355 1430 aa8.83□□□□□ -1
SPIDR-208ENST00000518711 PPP1R15AO75807 674 aaPredicted RBP8.83□□□□□ -1
SPIDR-208ENST00000518711 UNC5CLQ8IV45 518 aa8.83□□□□□ -1
SPIDR-208ENST00000518711 RIMS2Q9UQ26 1411 aa8.82□□□□□ -1
SPIDR-208ENST00000518711 ONECUT3O60422 494 aaPredicted RBP8.82□□□□□ -1
SPIDR-208ENST00000518711 KCNA4P22459 653 aa8.82□□□□□ -1
SPIDR-208ENST00000518711 APLP1P51693 650 aa8.82□□□□□ -1
SPIDR-208ENST00000518711 ADGRL2O95490 1459 aa8.81□□□□□ -1
SPIDR-208ENST00000518711 ADAMTS13Q76LX8 1427 aa8.8□□□□□ -1
SPIDR-208ENST00000518711 FHDC1Q9C0D6 1143 aaPredicted RBP8.8□□□□□ -1
SPIDR-208ENST00000518711 CROCC2H7BZ55 1655 aa8.8□□□□□ -1
SPIDR-208ENST00000518711 AATKQ6ZMQ8 1374 aa8.79□□□□□ -1
SPIDR-208ENST00000518711 PARD3Q8TEW0 1356 aa8.79□□□□□ -1
SPIDR-208ENST00000518711 APLP2Q06481 763 aa8.79□□□□□ -1
SPIDR-208ENST00000518711 AMOTL2Q9Y2J4 779 aa8.79□□□□□ -1
SPIDR-208ENST00000518711 SHANK3Q9BYB0 1731 aa8.79□□□□□ -1
SPIDR-208ENST00000518711 TMEM131LA2VDJ0 1609 aa8.79□□□□□ -1
SPIDR-208ENST00000518711 PTPN23Q9H3S7 1636 aa8.79□□□□□ -1
SPIDR-208ENST00000518711 ANKRD50Q9ULJ7 1429 aa8.79□□□□□ -1
SPIDR-208ENST00000518711 RGPD1P0DJD0 1748 aa8.78□□□□□ -1
SPIDR-208ENST00000518711 A0A0G2JS52 829 aa8.78□□□□□ -1
SPIDR-208ENST00000518711 MYT1Q01538 1121 aa8.78□□□□□ -1
SPIDR-208ENST00000518711 GPR162Q16538 588 aa8.78□□□□□ -1
SPIDR-208ENST00000518711 FAM161AQ3B820 660 aa8.77□□□□□ -1.01
SPIDR-208ENST00000518711 GPBP1L1Q9HC44 474 aaPredicted RBP8.77□□□□□ -1.01
SPIDR-208ENST00000518711 TRPM2O94759 1503 aa8.76□□□□□ -1.01
SPIDR-208ENST00000518711 FAM182BQ5T319 152 aa8.76□□□□□ -1.01
SPIDR-208ENST00000518711 JMYQ8N9B5 988 aa8.76□□□□□ -1.01
SPIDR-208ENST00000518711 CHIC2Q9UKJ5 165 aa8.76□□□□□ -1.01
SPIDR-208ENST00000518711 MST1RQ04912 1400 aa8.76□□□□□ -1.01
SPIDR-208ENST00000518711 NRKQ7Z2Y5 1582 aa8.76□□□□□ -1.01
SPIDR-208ENST00000518711 APBA3O96018 575 aa8.75□□□□□ -1.01
SPIDR-208ENST00000518711 VPS72Q15906 364 aa8.75□□□□□ -1.01
SPIDR-208ENST00000518711 CCDC9Q9Y3X0 531 aaKnown RBP8.75□□□□□ -1.01
SPIDR-208ENST00000518711 SOS2Q07890 1332 aaPredicted RBP8.75□□□□□ -1.01
SPIDR-208ENST00000518711 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.74□□□□□ -1.01
SPIDR-208ENST00000518711 TNS2Q63HR2 1409 aa8.74□□□□□ -1.01
SPIDR-208ENST00000518711 PTGER2P43116 358 aa8.74□□□□□ -1.01
SPIDR-208ENST00000518711 SLIT2O94813 1529 aa8.74□□□□□ -1.01
SPIDR-208ENST00000518711 ROCK1Q13464 1354 aa8.73□□□□□ -1.01
SPIDR-208ENST00000518711 PTPRUQ92729 1446 aa8.73□□□□□ -1.01
SPIDR-208ENST00000518711 MYOM2P54296 1465 aa8.73□□□□□ -1.01
SPIDR-208ENST00000518711 TRIM37O94972 964 aa8.73□□□□□ -1.01
SPIDR-208ENST00000518711 KLRG1Q96E93 195 aa8.73□□□□□ -1.01
SPIDR-208ENST00000518711 ATP10DQ9P241 1426 aa8.72□□□□□ -1.01
SPIDR-208ENST00000518711 GCC2Q8IWJ2 1684 aa8.72□□□□□ -1.01
SPIDR-208ENST00000518711 DLC1Q96QB1 1528 aa8.72□□□□□ -1.01
SPIDR-208ENST00000518711 PPP4R3CPQ6ZMV5 832 aa8.72□□□□□ -1.01
SPIDR-208ENST00000518711 MYO5BQ9ULV0 1848 aa8.72□□□□□ -1.01
SPIDR-208ENST00000518711 LAMC1P11047 1609 aa8.72□□□□□ -1.01
SPIDR-208ENST00000518711 ADGRL3Q9HAR2 1447 aa8.71□□□□□ -1.01
SPIDR-208ENST00000518711 ADGRB2O60241 1585 aa8.71□□□□□ -1.02
SPIDR-208ENST00000518711 ZBTB7AO95365 584 aa8.71□□□□□ -1.02
SPIDR-208ENST00000518711 CHGAP10645 457 aaKnown RBP8.71□□□□□ -1.02
SPIDR-208ENST00000518711 ATF5Q9Y2D1 282 aaPredicted RBP8.71□□□□□ -1.02
SPIDR-208ENST00000518711 MYOM1P52179 1685 aa8.71□□□□□ -1.02
SPIDR-208ENST00000518711 TNS1Q9HBL0 1735 aaKnown RBP8.71□□□□□ -1.02
SPIDR-208ENST00000518711 PRAG1Q86YV5 1406 aa8.71□□□□□ -1.02
SPIDR-208ENST00000518711 COL22A1Q8NFW1 1626 aaPredicted RBP8.7□□□□□ -1.02
SPIDR-208ENST00000518711 XRN1Q8IZH2 1706 aaKnown RBP8.7□□□□□ -1.02
SPIDR-208ENST00000518711 FAM98CQ17RN3 349 aaKnown RBP8.69□□□□□ -1.02
SPIDR-208ENST00000518711 METP08581 1390 aa8.69□□□□□ -1.02
SPIDR-208ENST00000518711 C1orf167Q5SNV9 1468 aa8.69□□□□□ -1.02
SPIDR-208ENST00000518711 MARF1Q9Y4F3 1742 aaKnown RBP8.68□□□□□ -1.02
SPIDR-208ENST00000518711 LOC105371045A0A1W2PR82 267 aa8.68□□□□□ -1.02
SPIDR-208ENST00000518711 PELP1Q8IZL8 1130 aaKnown RBP8.68□□□□□ -1.02
SPIDR-208ENST00000518711 ZNF526Q8TF50 670 aaPredicted RBP8.68□□□□□ -1.02
SPIDR-208ENST00000518711 PDGFDQ9GZP0 370 aaPredicted RBP8.68□□□□□ -1.02
SPIDR-208ENST00000518711 NUP155O75694 1391 aa8.68□□□□□ -1.02
SPIDR-208ENST00000518711 RREB1Q92766 1687 aa8.68□□□□□ -1.02
SPIDR-208ENST00000518711 NUP188Q5SRE5 1749 aa8.68□□□□□ -1.02
SPIDR-208ENST00000518711 E9PCH4 1651 aa8.67□□□□□ -1.02
SPIDR-208ENST00000518711 VGFO15240 615 aaPredicted RBP8.67□□□□□ -1.02
SPIDR-208ENST00000518711 MLLT1Q03111 559 aaPredicted RBP8.67□□□□□ -1.02
SPIDR-208ENST00000518711 FAM50AQ14320 339 aaKnown RBP8.67□□□□□ -1.02
SPIDR-208ENST00000518711 FAM196AQ6ZSG2 479 aa8.67□□□□□ -1.02
SPIDR-208ENST00000518711 IQGAP3Q86VI3 1631 aa8.67□□□□□ -1.02
SPIDR-208ENST00000518711 RPGRIP1LQ68CZ1 1315 aa8.66□□□□□ -1.02
SPIDR-208ENST00000518711 NPHP3Q7Z494 1330 aa8.66□□□□□ -1.02
SPIDR-208ENST00000518711 NRXN3Q9Y4C0 1643 aa8.65□□□□□ -1.02
SPIDR-208ENST00000518711 HFM1A2PYH4 1435 aa8.65□□□□□ -1.02
SPIDR-208ENST00000518711 LRPPRCP42704 1394 aaKnown RBP8.65□□□□□ -1.02
SPIDR-208ENST00000518711 NCBP3Q53F19 620 aaKnown RBP8.65□□□□□ -1.02
SPIDR-208ENST00000518711 MAP3K5Q99683 1374 aa8.64□□□□□ -1.03
SPIDR-208ENST00000518711 KIF3CO14782 793 aa8.64□□□□□ -1.03
SPIDR-208ENST00000518711 ZNF326Q5BKZ1 582 aaKnown RBP8.64□□□□□ -1.03
SPIDR-208ENST00000518711 ARXQ96QS3 562 aa8.64□□□□□ -1.03
SPIDR-208ENST00000518711 ORAI2Q96SN7 254 aa8.64□□□□□ -1.03
SPIDR-208ENST00000518711 GRIN3BO60391 1043 aa8.63□□□□□ -1.03
SPIDR-208ENST00000518711 HSPA1AP0DMV8 641 aaKnown RBP8.63□□□□□ -1.03
SPIDR-208ENST00000518711 HSPA1BP0DMV9 641 aaKnown RBP8.63□□□□□ -1.03
SPIDR-208ENST00000518711 HTRA3P83110 453 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms