RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 PPEF1O14829 653 aaPredicted RBP11.38□□□□□ -0.59
CCDC6-203ENST00000518638 LCE2AQ5TA79 106 aaPredicted RBP11.38□□□□□ -0.59
CCDC6-203ENST00000518638 TDRD9Q8NDG6 1382 aaKnown RBP11.38□□□□□ -0.59
CCDC6-203ENST00000518638 ST8SIA5O15466 376 aa11.37□□□□□ -0.59
CCDC6-203ENST00000518638 RAD54L2Q9Y4B4 1467 aa11.37□□□□□ -0.59
CCDC6-203ENST00000518638 KMT5BQ4FZB7 885 aa11.36□□□□□ -0.59
CCDC6-203ENST00000518638 AAASQ9NRG9 546 aa11.36□□□□□ -0.59
CCDC6-203ENST00000518638 ACTN4O43707 911 aaKnown RBP11.34□□□□□ -0.59
CCDC6-203ENST00000518638 DNAJB2P25686 324 aa11.34□□□□□ -0.59
CCDC6-203ENST00000518638 FGD5Q6ZNL6 1462 aa11.33□□□□□ -0.6
CCDC6-203ENST00000518638 ADH1BP00325 375 aa11.33□□□□□ -0.6
CCDC6-203ENST00000518638 PBRM1Q86U86 1689 aa11.33□□□□□ -0.6
CCDC6-203ENST00000518638 LMOD2Q6P5Q4 547 aa11.31□□□□□ -0.6
CCDC6-203ENST00000518638 SEMA3EO15041 775 aa11.3□□□□□ -0.6
CCDC6-203ENST00000518638 TMEM134Q9H6X4 195 aa11.3□□□□□ -0.6
CCDC6-203ENST00000518638 NR1I2O75469 434 aa11.29□□□□□ -0.6
CCDC6-203ENST00000518638 CFHP08603 1231 aa11.29□□□□□ -0.6
CCDC6-203ENST00000518638 BCANQ96GW7 911 aa11.29□□□□□ -0.6
CCDC6-203ENST00000518638 SLC6A16Q9GZN6 736 aa11.29□□□□□ -0.6
CCDC6-203ENST00000518638 CRIPAKQ8N1N5 446 aa11.28□□□□□ -0.6
CCDC6-203ENST00000518638 RBM46Q8TBY0 533 aaKnown RBP11.28□□□□□ -0.6
CCDC6-203ENST00000518638 TESPA1A2RU30 521 aaPredicted RBP11.27□□□□□ -0.61
CCDC6-203ENST00000518638 WFS1O76024 890 aa11.27□□□□□ -0.61
CCDC6-203ENST00000518638 PLA2G2CQ5R387 149 aa11.27□□□□□ -0.61
CCDC6-203ENST00000518638 KIF13AQ9H1H9 1805 aa11.26□□□□□ -0.61
CCDC6-203ENST00000518638 FOXC1Q12948 553 aa11.26□□□□□ -0.61
CCDC6-203ENST00000518638 PKD2L1Q9P0L9 805 aa11.26□□□□□ -0.61
CCDC6-203ENST00000518638 STK17AQ9UEE5 414 aa11.26□□□□□ -0.61
CCDC6-203ENST00000518638 CUX1P39880 1505 aa11.25□□□□□ -0.61
CCDC6-203ENST00000518638 MLLT3P42568 568 aaPredicted RBP11.24□□□□□ -0.61
CCDC6-203ENST00000518638 GRIN2AQ12879 1464 aa11.24□□□□□ -0.61
CCDC6-203ENST00000518638 CEP170Q5SW79 1584 aa11.24□□□□□ -0.61
CCDC6-203ENST00000518638 ABCA5Q8WWZ7 1642 aa11.24□□□□□ -0.61
CCDC6-203ENST00000518638 SHROOM2Q13796 1616 aa11.22□□□□□ -0.61
CCDC6-203ENST00000518638 ABCA10Q8WWZ4 1543 aa11.22□□□□□ -0.61
CCDC6-203ENST00000518638 ADGRG1Q9Y653 693 aa11.22□□□□□ -0.61
CCDC6-203ENST00000518638 NUP160Q12769 1436 aa11.21□□□□□ -0.61
CCDC6-203ENST00000518638 RCCD1A6NED2 376 aa11.21□□□□□ -0.61
CCDC6-203ENST00000518638 AVPP01185 164 aa11.21□□□□□ -0.61
CCDC6-203ENST00000518638 GMPR2Q9P2T1 348 aaKnown RBP11.21□□□□□ -0.61
CCDC6-203ENST00000518638 DACH1Q9UI36 760 aa11.21□□□□□ -0.61
CCDC6-203ENST00000518638 ERCC6L2Q5T890 1561 aa11.2□□□□□ -0.62
CCDC6-203ENST00000518638 C11orf95C9JLR9 678 aaPredicted RBP11.2□□□□□ -0.62
CCDC6-203ENST00000518638 AXIN1O15169 862 aa11.2□□□□□ -0.62
CCDC6-203ENST00000518638 SMYD5Q6GMV2 418 aa11.2□□□□□ -0.62
CCDC6-203ENST00000518638 RPIAP49247 311 aa11.19□□□□□ -0.62
CCDC6-203ENST00000518638 INSM1Q01101 510 aaPredicted RBP11.19□□□□□ -0.62
CCDC6-203ENST00000518638 PTGDRQ13258 359 aa11.19□□□□□ -0.62
CCDC6-203ENST00000518638 CTC1Q2NKJ3 1217 aa11.19□□□□□ -0.62
CCDC6-203ENST00000518638 ADAMTS12P58397 1594 aa11.19□□□□□ -0.62
CCDC6-203ENST00000518638 WIPF1O43516 503 aa11.18□□□□□ -0.62
CCDC6-203ENST00000518638 SLC10A3P09131 477 aa11.18□□□□□ -0.62
CCDC6-203ENST00000518638 SCUBE3Q8IX30 993 aa11.18□□□□□ -0.62
CCDC6-203ENST00000518638 TOR4AQ9NXH8 423 aa11.18□□□□□ -0.62
CCDC6-203ENST00000518638 NFX1Q12986 1120 aaKnown RBP11.17□□□□□ -0.62
CCDC6-203ENST00000518638 CYP4X1Q8N118 509 aa11.17□□□□□ -0.62
CCDC6-203ENST00000518638 SPSB2Q99619 263 aa11.17□□□□□ -0.62
CCDC6-203ENST00000518638 ABCC10Q5T3U5 1492 aa11.17□□□□□ -0.62
CCDC6-203ENST00000518638 MAPKBP1O60336 1514 aa11.16□□□□□ -0.62
CCDC6-203ENST00000518638 TULP1O00294 542 aaPredicted RBP11.16□□□□□ -0.62
CCDC6-203ENST00000518638 KDM6BO15054 1643 aa11.16□□□□□ -0.62
CCDC6-203ENST00000518638 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.14□□□□□ -0.63
CCDC6-203ENST00000518638 SMCPP49901 116 aaPredicted RBP11.14□□□□□ -0.63
CCDC6-203ENST00000518638 FHAD1B1AJZ9 1412 aa11.14□□□□□ -0.63
CCDC6-203ENST00000518638 DIP2BQ9P265 1576 aa11.13□□□□□ -0.63
CCDC6-203ENST00000518638 CD2BP2O95400 341 aaKnown RBP11.13□□□□□ -0.63
CCDC6-203ENST00000518638 FAM69CQ0P6D2 419 aa11.12□□□□□ -0.63
CCDC6-203ENST00000518638 FAM161AQ3B820 660 aa11.12□□□□□ -0.63
CCDC6-203ENST00000518638 PUS10Q3MIT2 529 aaKnown RBP11.12□□□□□ -0.63
CCDC6-203ENST00000518638 WRNQ14191 1432 aaPredicted RBP eCLIP11.11□□□□□ -0.63
CCDC6-203ENST00000518638 RSPH4AQ5TD94 716 aa11.11□□□□□ -0.63
CCDC6-203ENST00000518638 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.11□□□□□ -0.63
CCDC6-203ENST00000518638 FCF1Q9Y324 198 aaKnown RBP11.11□□□□□ -0.63
CCDC6-203ENST00000518638 PRG4Q92954 1404 aaPredicted RBP11.1□□□□□ -0.63
CCDC6-203ENST00000518638 ERICH3Q5RHP9 1530 aa11.1□□□□□ -0.63
CCDC6-203ENST00000518638 RBM26Q5T8P6 1007 aaKnown RBP11.09□□□□□ -0.63
CCDC6-203ENST00000518638 TTC24A2A3L6 582 aaPredicted RBP11.07□□□□□ -0.64
CCDC6-203ENST00000518638 NUTM2FA1L443 756 aa11.06□□□□□ -0.64
CCDC6-203ENST00000518638 RUSC2Q8N2Y8 1516 aa11.04□□□□□ -0.64
CCDC6-203ENST00000518638 OATP04181 439 aa11.04□□□□□ -0.64
CCDC6-203ENST00000518638 ADCY10Q96PN6 1610 aa11.04□□□□□ -0.64
CCDC6-203ENST00000518638 TSPOAP1O95153 1857 aa11.04□□□□□ -0.64
CCDC6-203ENST00000518638 BIVM-ERCC5R4GMW8 1640 aa11.03□□□□□ -0.64
CCDC6-203ENST00000518638 TERTO14746 1132 aaKnown RBP11.03□□□□□ -0.64
CCDC6-203ENST00000518638 PXYLP1Q8TE99 480 aa11.03□□□□□ -0.64
CCDC6-203ENST00000518638 ATP13A2Q9NQ11 1180 aa11.03□□□□□ -0.64
CCDC6-203ENST00000518638 TOP2BQ02880 1626 aa11.02□□□□□ -0.64
CCDC6-203ENST00000518638 FCHSD2O94868 740 aa11.02□□□□□ -0.65
CCDC6-203ENST00000518638 GPIHBP1Q8IV16 184 aa11.02□□□□□ -0.65
CCDC6-203ENST00000518638 THAP11Q96EK4 314 aa11.02□□□□□ -0.65
CCDC6-203ENST00000518638 SENP2Q9HC62 589 aa11.02□□□□□ -0.65
CCDC6-203ENST00000518638 ZBTB24O43167 697 aaPredicted RBP11.01□□□□□ -0.65
CCDC6-203ENST00000518638 MORN1Q5T089 497 aa11.01□□□□□ -0.65
CCDC6-203ENST00000518638 GPR37O15354 613 aa11□□□□□ -0.65
CCDC6-203ENST00000518638 FMNL1O95466 1100 aaPredicted RBP11□□□□□ -0.65
CCDC6-203ENST00000518638 SNRPBP14678 240 aaKnown RBP11□□□□□ -0.65
CCDC6-203ENST00000518638 LCE2CQ5TA81 110 aa11□□□□□ -0.65
CCDC6-203ENST00000518638 TRIM47Q96LD4 638 aa11□□□□□ -0.65
CCDC6-203ENST00000518638 ADGRL1O94910 1474 aa11□□□□□ -0.65
CCDC6-203ENST00000518638 SMPD1P17405 629 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms