RNA–Protein interactions for RNA: ENST00000518587.1

NPM1-205, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-205ENST00000518587 MYO5CQ9NQX4 1742 aa10.16□□□□□ -0.78
NPM1-205ENST00000518587 LSM11P83369 360 aaKnown RBP eCLIP10.16□□□□□ -0.786e-8■■■■■ 28.5
NPM1-205ENST00000518587 ZBED2Q9BTP6 218 aa10.16□□□□□ -0.78
NPM1-205ENST00000518587 TROQ12816 1431 aaPredicted RBP10.16□□□□□ -0.78
NPM1-205ENST00000518587 TTC37Q6PGP7 1564 aa10.15□□□□□ -0.78
NPM1-205ENST00000518587 RANGAP1P46060 587 aaPredicted RBP10.15□□□□□ -0.78
NPM1-205ENST00000518587 ZNF518AQ6AHZ1 1483 aa10.15□□□□□ -0.78
NPM1-205ENST00000518587 PCF11O94913 1555 aaKnown RBP10.14□□□□□ -0.79
NPM1-205ENST00000518587 PRKCSHP14314 528 aaPredicted RBP10.14□□□□□ -0.79
NPM1-205ENST00000518587 PRSS12P56730 875 aa10.14□□□□□ -0.79
NPM1-205ENST00000518587 ZC3H15Q8WU90 426 aaKnown RBP10.14□□□□□ -0.79
NPM1-205ENST00000518587 SLC4A5Q9BY07 1137 aa10.14□□□□□ -0.79
NPM1-205ENST00000518587 ARHGAP35Q9NRY4 1499 aa10.14□□□□□ -0.79
NPM1-205ENST00000518587 C9orf84Q5VXU9 1444 aa10.14□□□□□ -0.79
NPM1-205ENST00000518587 SCAPERQ9BY12 1400 aa10.14□□□□□ -0.79
NPM1-205ENST00000518587 MADDQ8WXG6 1647 aa10.14□□□□□ -0.79
NPM1-205ENST00000518587 CDK13Q14004 1512 aaKnown RBP10.13□□□□□ -0.79
NPM1-205ENST00000518587 PROX2Q3B8N5 592 aa10.13□□□□□ -0.79
NPM1-205ENST00000518587 ANKRD13DQ6ZTN6 518 aa10.13□□□□□ -0.79
NPM1-205ENST00000518587 CDCA7LQ96GN5 454 aa10.13□□□□□ -0.79
NPM1-205ENST00000518587 PCDH10Q9P2E7 1040 aa10.13□□□□□ -0.79
NPM1-205ENST00000518587 ATP10AO60312 1499 aa10.12□□□□□ -0.79
NPM1-205ENST00000518587 HIC1Q14526 733 aa10.12□□□□□ -0.79
NPM1-205ENST00000518587 VPS9D1Q9Y2B5 631 aa10.12□□□□□ -0.79
NPM1-205ENST00000518587 REREQ9P2R6 1566 aa10.11□□□□□ -0.79
NPM1-205ENST00000518587 CASKIN1Q8WXD9 1431 aa10.11□□□□□ -0.79
NPM1-205ENST00000518587 TK2O00142 265 aa10.11□□□□□ -0.79
NPM1-205ENST00000518587 GNPATO15228 680 aa10.11□□□□□ -0.79
NPM1-205ENST00000518587 TTC13Q8NBP0 860 aa10.11□□□□□ -0.79
NPM1-205ENST00000518587 FAM198AQ9UFP1 575 aa10.11□□□□□ -0.79
NPM1-205ENST00000518587 TSKSQ9UJT2 592 aa10.11□□□□□ -0.79
NPM1-205ENST00000518587 ARHGAP5Q13017 1502 aa10.11□□□□□ -0.79
NPM1-205ENST00000518587 TRIM6-TRIM34B2RNG4 842 aa10.1□□□□□ -0.79
NPM1-205ENST00000518587 FECHP22830 423 aa10.1□□□□□ -0.79
NPM1-205ENST00000518587 ADGRD1Q6QNK2 874 aa10.1□□□□□ -0.79
NPM1-205ENST00000518587 PADI6Q6TGC4 694 aa10.1□□□□□ -0.79
NPM1-205ENST00000518587 RBM27Q9P2N5 1060 aaKnown RBP10.1□□□□□ -0.79
NPM1-205ENST00000518587 ATP1B4Q9UN42 357 aaPredicted RBP10.1□□□□□ -0.79
NPM1-205ENST00000518587 FYCO1Q9BQS8 1478 aa10.1□□□□□ -0.79
NPM1-205ENST00000518587 KDM5CP41229 1560 aa10.09□□□□□ -0.79
NPM1-205ENST00000518587 RIMS1Q86UR5 1692 aaKnown RBP10.09□□□□□ -0.79
NPM1-205ENST00000518587 ONECUT3O60422 494 aaPredicted RBP10.09□□□□□ -0.79
NPM1-205ENST00000518587 ZMYND10O75800 440 aa10.09□□□□□ -0.79
NPM1-205ENST00000518587 FBXO41Q8TF61 875 aa10.09□□□□□ -0.79
NPM1-205ENST00000518587 KIAA1468Q9P260 1216 aa10.08□□□□□ -0.8
NPM1-205ENST00000518587 LMTK3Q96Q04 1460 aa10.08□□□□□ -0.8
NPM1-205ENST00000518587 MLH3Q9UHC1 1453 aa10.08□□□□□ -0.8
NPM1-205ENST00000518587 FER1L4A9Z1Z3 1794 aa10.08□□□□□ -0.8
NPM1-205ENST00000518587 YEATS2Q9ULM3 1422 aa10.07□□□□□ -0.8
NPM1-205ENST00000518587 ARHGEF12Q9NZN5 1544 aa10.07□□□□□ -0.8
NPM1-205ENST00000518587 PREX2Q70Z35 1606 aa10.07□□□□□ -0.8
NPM1-205ENST00000518587 PLEKHH2Q8IVE3 1493 aa10.06□□□□□ -0.8
NPM1-205ENST00000518587 C3orf80F5H4A9 247 aa10.06□□□□□ -0.8
NPM1-205ENST00000518587 BARGINQ6ZT62 677 aa10.06□□□□□ -0.8
NPM1-205ENST00000518587 PACS2Q86VP3 889 aa10.06□□□□□ -0.8
NPM1-205ENST00000518587 RABGEF1Q9UJ41 708 aa10.06□□□□□ -0.8
NPM1-205ENST00000518587 SETD1BQ9UPS6 1966 aaKnown RBP10.06□□□□□ -0.8
NPM1-205ENST00000518587 AGLP35573 1532 aa10.06□□□□□ -0.8
NPM1-205ENST00000518587 CNTLNQ9NXG0 1405 aa10.06□□□□□ -0.8
NPM1-205ENST00000518587 BHMG1C9JSJ3 638 aaPredicted RBP10.05□□□□□ -0.8
NPM1-205ENST00000518587 HRO43593 1189 aa10.05□□□□□ -0.8
NPM1-205ENST00000518587 ESF1Q9H501 851 aaKnown RBP10.05□□□□□ -0.8
NPM1-205ENST00000518587 PREX1Q8TCU6 1659 aa10.04□□□□□ -0.8
NPM1-205ENST00000518587 MYT1LQ9UL68 1186 aa10.04□□□□□ -0.8
NPM1-205ENST00000518587 ABCC1P33527 1531 aa10.03□□□□□ -0.8
NPM1-205ENST00000518587 FAM161AQ3B820 660 aa10.03□□□□□ -0.8
NPM1-205ENST00000518587 TPRNQ4KMQ1 711 aa10.03□□□□□ -0.8
NPM1-205ENST00000518587 UHRF1BP1Q6BDS2 1440 aa10.02□□□□□ -0.81
NPM1-205ENST00000518587 KIAA1107Q9UPP5 1409 aa10.02□□□□□ -0.81
NPM1-205ENST00000518587 TATDN2Q93075 761 aa10.02□□□□□ -0.81
NPM1-205ENST00000518587 ADGRG1Q9Y653 693 aa10.02□□□□□ -0.81
NPM1-205ENST00000518587 CDC42BPBQ9Y5S2 1711 aa10.02□□□□□ -0.81
NPM1-205ENST00000518587 DIP2CQ9Y2E4 1556 aa10.01□□□□□ -0.81
NPM1-205ENST00000518587 SMAPO00193 183 aa10.01□□□□□ -0.81
NPM1-205ENST00000518587 MAP2K5Q13163 448 aa10.01□□□□□ -0.81
NPM1-205ENST00000518587 NUDT18Q6ZVK8 323 aa10.01□□□□□ -0.81
NPM1-205ENST00000518587 PNMA3Q9UL41 463 aa10.01□□□□□ -0.81
NPM1-205ENST00000518587 ITSN2Q9NZM3 1697 aa10.01□□□□□ -0.81
NPM1-205ENST00000518587 MINK1Q8N4C8 1332 aaPredicted RBP10.01□□□□□ -0.81
NPM1-205ENST00000518587 IRF6O14896 467 aa10□□□□□ -0.81
NPM1-205ENST00000518587 KRI1Q8N9T8 703 aaKnown RBP10□□□□□ -0.81
NPM1-205ENST00000518587 ARXQ96QS3 562 aa10□□□□□ -0.81
NPM1-205ENST00000518587 LRRIQ1Q96JM4 1722 aa9.99□□□□□ -0.81
NPM1-205ENST00000518587 NBPF26B4DH59 902 aa9.99□□□□□ -0.81
NPM1-205ENST00000518587 MLECQ14165 292 aa9.99□□□□□ -0.81
NPM1-205ENST00000518587 AFAP1Q8N556 730 aa9.99□□□□□ -0.81
NPM1-205ENST00000518587 EYA1Q99502 592 aa9.99□□□□□ -0.81
NPM1-205ENST00000518587 NBPF3Q9H094 633 aa9.99□□□□□ -0.81
NPM1-205ENST00000518587 SEPT9Q9UHD8 586 aaPredicted RBP9.99□□□□□ -0.81
NPM1-205ENST00000518587 CDC42BPAQ5VT25 1732 aa9.99□□□□□ -0.81
NPM1-205ENST00000518587 MTUS2Q5JR59 1369 aa9.98□□□□□ -0.81
NPM1-205ENST00000518587 NPATQ14207 1427 aa9.98□□□□□ -0.81
NPM1-205ENST00000518587 TRAPPC8Q9Y2L5 1435 aa9.98□□□□□ -0.81
NPM1-205ENST00000518587 ABCA6Q8N139 1617 aa9.97□□□□□ -0.81
NPM1-205ENST00000518587 MROH2AA6NES4 1674 aa9.97□□□□□ -0.81
NPM1-205ENST00000518587 SIGLEC1Q9BZZ2 1709 aa9.97□□□□□ -0.81
NPM1-205ENST00000518587 OATP04181 439 aa9.97□□□□□ -0.81
NPM1-205ENST00000518587 RSPH4AQ5TD94 716 aa9.97□□□□□ -0.81
NPM1-205ENST00000518587 SPNS2Q8IVW8 549 aa9.97□□□□□ -0.81
NPM1-205ENST00000518587 MRPL50Q8N5N7 158 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms