RNA–Protein interactions for RNA: ENST00000518426.1

CLVS1-202, Transcript of clavesin 1, humanhuman

TSL 4

Gene CLVS1, Length 312 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-202ENST00000518426 POM121CA8CG34 1229 aa6.16□□□□□ -1.42
CLVS1-202ENST00000518426 KDM4AO75164 1064 aa6.16□□□□□ -1.42
CLVS1-202ENST00000518426 GJA5P36382 358 aa6.16□□□□□ -1.42
CLVS1-202ENST00000518426 KCNH8Q96L42 1107 aa6.16□□□□□ -1.42
CLVS1-202ENST00000518426 RETREG2Q8NC44 543 aa6.15□□□□□ -1.42
CLVS1-202ENST00000518426 GLMNQ92990 594 aa6.15□□□□□ -1.42
CLVS1-202ENST00000518426 KCNK17Q96T54 332 aa6.15□□□□□ -1.42
CLVS1-202ENST00000518426 TRAIPQ9BWF2 469 aa6.15□□□□□ -1.42
CLVS1-202ENST00000518426 ZBTB3Q9H5J0 574 aa6.15□□□□□ -1.42
CLVS1-202ENST00000518426 VPS9D1Q9Y2B5 631 aa6.15□□□□□ -1.42
CLVS1-202ENST00000518426 SOCS7O14512 581 aa6.14□□□□□ -1.43
CLVS1-202ENST00000518426 HOXA2O43364 376 aa6.14□□□□□ -1.43
CLVS1-202ENST00000518426 FDX1P10109 184 aa6.14□□□□□ -1.43
CLVS1-202ENST00000518426 GUCA2AQ02747 115 aa6.14□□□□□ -1.43
CLVS1-202ENST00000518426 PRPF38BQ5VTL8 546 aaKnown RBP6.14□□□□□ -1.43
CLVS1-202ENST00000518426 NPM2Q86SE8 214 aaKnown RBP6.14□□□□□ -1.43
CLVS1-202ENST00000518426 AEBP1Q8IUX7 1158 aa6.14□□□□□ -1.43
CLVS1-202ENST00000518426 CCDC9Q9Y3X0 531 aaKnown RBP6.14□□□□□ -1.43
CLVS1-202ENST00000518426 GOLGA8CPA6NN73 597 aa6.13□□□□□ -1.43
CLVS1-202ENST00000518426 USP46P62068 366 aa6.13□□□□□ -1.43
CLVS1-202ENST00000518426 LAPTM4AQ15012 233 aa6.13□□□□□ -1.43
CLVS1-202ENST00000518426 RSPH4AQ5TD94 716 aa6.13□□□□□ -1.43
CLVS1-202ENST00000518426 TRAF7Q6Q0C0 670 aa6.13□□□□□ -1.43
CLVS1-202ENST00000518426 TSC1Q92574 1164 aa6.13□□□□□ -1.43
CLVS1-202ENST00000518426 HLA-CQ95604 372 aa6.13□□□□□ -1.43
CLVS1-202ENST00000518426 NDUFB9Q9Y6M9 179 aa6.13□□□□□ -1.43
CLVS1-202ENST00000518426 GCGRP47871 477 aa6.12□□□□□ -1.43
CLVS1-202ENST00000518426 SWT1Q5T5J6 900 aaKnown RBP6.12□□□□□ -1.43
CLVS1-202ENST00000518426 WNT2BQ93097 391 aa6.12□□□□□ -1.43
CLVS1-202ENST00000518426 KIAA1468Q9P260 1216 aa6.12□□□□□ -1.43
CLVS1-202ENST00000518426 PCDHGC3Q9UN70 934 aa6.12□□□□□ -1.43
CLVS1-202ENST00000518426 LCE2BO14633 110 aa6.11□□□□□ -1.43
CLVS1-202ENST00000518426 KCTD17Q8N5Z5 321 aa6.11□□□□□ -1.43
CLVS1-202ENST00000518426 GJD4Q96KN9 370 aaPredicted RBP6.11□□□□□ -1.43
CLVS1-202ENST00000518426 HMX1Q9NP08 348 aaPredicted RBP6.11□□□□□ -1.43
CLVS1-202ENST00000518426 SLC10A3P09131 477 aa6.1□□□□□ -1.43
CLVS1-202ENST00000518426 CTDSPL2Q05D32 466 aa6.1□□□□□ -1.43
CLVS1-202ENST00000518426 IRF5Q13568 498 aa6.1□□□□□ -1.43
CLVS1-202ENST00000518426 HELBQ8NG08 1087 aaPredicted RBP6.1□□□□□ -1.43
CLVS1-202ENST00000518426 SEPT9Q9UHD8 586 aaPredicted RBP6.1□□□□□ -1.43
CLVS1-202ENST00000518426 ACIN1Q9UKV3 1341 aaKnown RBP6.09□□□□□ -1.43
CLVS1-202ENST00000518426 PPP1R15AO75807 674 aaPredicted RBP6.09□□□□□ -1.43
CLVS1-202ENST00000518426 MTMR2Q13614 643 aa6.09□□□□□ -1.43
CLVS1-202ENST00000518426 HDGFL1Q5TGJ6 251 aa6.09□□□□□ -1.43
CLVS1-202ENST00000518426 ZBED2Q9BTP6 218 aa6.09□□□□□ -1.43
CLVS1-202ENST00000518426 BHMG1C9JSJ3 638 aaPredicted RBP6.08□□□□□ -1.44
CLVS1-202ENST00000518426 C6orf229H3BNL8 230 aa6.08□□□□□ -1.44
CLVS1-202ENST00000518426 ITGBL1O95965 494 aaPredicted RBP6.08□□□□□ -1.44
CLVS1-202ENST00000518426 RFX1P22670 979 aa6.08□□□□□ -1.44
CLVS1-202ENST00000518426 WASHC4Q2M389 1173 aa6.08□□□□□ -1.44
CLVS1-202ENST00000518426 MRPL50Q8N5N7 158 aaKnown RBP6.08□□□□□ -1.44
CLVS1-202ENST00000518426 ADAMTS19Q8TE59 1207 aa6.08□□□□□ -1.44
CLVS1-202ENST00000518426 LRRN4Q8WUT4 740 aa6.08□□□□□ -1.44
CLVS1-202ENST00000518426 SLC4A5Q9BY07 1137 aa6.08□□□□□ -1.44
CLVS1-202ENST00000518426 TRIM34Q9BYJ4 488 aa6.08□□□□□ -1.44
CLVS1-202ENST00000518426 GFRA3O60609 400 aa6.07□□□□□ -1.44
CLVS1-202ENST00000518426 SLC4A3P48751 1232 aa6.07□□□□□ -1.44
CLVS1-202ENST00000518426 HDGFP51858 240 aaKnown RBP6.07□□□□□ -1.44
CLVS1-202ENST00000518426 VAC14Q08AM6 782 aa6.07□□□□□ -1.44
CLVS1-202ENST00000518426 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.06□□□□□ -1.44
CLVS1-202ENST00000518426 CFAP99D6REC4 459 aa6.06□□□□□ -1.44
CLVS1-202ENST00000518426 GPR37L1O60883 481 aa6.06□□□□□ -1.44
CLVS1-202ENST00000518426 RNF40O75150 1001 aa6.06□□□□□ -1.44
CLVS1-202ENST00000518426 FUT2Q10981 343 aa6.06□□□□□ -1.44
CLVS1-202ENST00000518426 GRIPAP1Q4V328 841 aa6.06□□□□□ -1.44
CLVS1-202ENST00000518426 PBXIP1Q96AQ6 731 aa6.06□□□□□ -1.44
CLVS1-202ENST00000518426 RABGEF1Q9UJ41 708 aa6.06□□□□□ -1.44
CLVS1-202ENST00000518426 CFHP08603 1231 aa6.05□□□□□ -1.44
CLVS1-202ENST00000518426 EPS8L1Q8TE68 723 aa6.05□□□□□ -1.44
CLVS1-202ENST00000518426 SYMPKQ92797 1274 aaKnown RBP6.05□□□□□ -1.44
CLVS1-202ENST00000518426 PDE4CQ08493 712 aa6.04□□□□□ -1.44
CLVS1-202ENST00000518426 FAM98CQ17RN3 349 aaKnown RBP6.04□□□□□ -1.44
CLVS1-202ENST00000518426 CFAP70Q5T0N1 1121 aa6.04□□□□□ -1.44
CLVS1-202ENST00000518426 ZNF787Q6DD87 383 aa6.04□□□□□ -1.44
CLVS1-202ENST00000518426 SAMD7Q7Z3H4 446 aa6.04□□□□□ -1.44
CLVS1-202ENST00000518426 SLF2Q8IX21 1173 aa6.04□□□□□ -1.44
CLVS1-202ENST00000518426 PRR7Q8TB68 274 aa6.03□□□□□ -1.44
CLVS1-202ENST00000518426 PPP1R12CQ9BZL4 782 aa6.03□□□□□ -1.44
CLVS1-202ENST00000518426 GZF1Q9H116 711 aaPredicted RBP6.03□□□□□ -1.44
CLVS1-202ENST00000518426 CSB-PGBD3P0DP91 1061 aa6.02□□□□□ -1.45
CLVS1-202ENST00000518426 ATP6V1AP38606 617 aa6.02□□□□□ -1.45
CLVS1-202ENST00000518426 NR6A1Q15406 480 aa6.02□□□□□ -1.45
CLVS1-202ENST00000518426 TMCO4Q5TGY1 634 aa6.02□□□□□ -1.45
CLVS1-202ENST00000518426 NBPF3Q9H094 633 aa6.02□□□□□ -1.45
CLVS1-202ENST00000518426 PALM3A6NDB9 673 aaPredicted RBP6.01□□□□□ -1.45
CLVS1-202ENST00000518426 PER1O15534 1290 aaPredicted RBP6.01□□□□□ -1.45
CLVS1-202ENST00000518426 LMOD1P29536 600 aaPredicted RBP6.01□□□□□ -1.45
CLVS1-202ENST00000518426 ZNF775Q96BV0 537 aaPredicted RBP6.01□□□□□ -1.45
CLVS1-202ENST00000518426 ALG2Q9H553 416 aa6.01□□□□□ -1.45
CLVS1-202ENST00000518426 KCNC4Q03721 635 aa6□□□□□ -1.45
CLVS1-202ENST00000518426 SEMA3FQ13275 785 aa6□□□□□ -1.45
CLVS1-202ENST00000518426 PUS10Q3MIT2 529 aaKnown RBP6□□□□□ -1.45
CLVS1-202ENST00000518426 KMT5BQ4FZB7 885 aa6□□□□□ -1.45
CLVS1-202ENST00000518426 TFIP11Q9UBB9 837 aaKnown RBP6□□□□□ -1.45
CLVS1-202ENST00000518426 CARNS1A5YM72 827 aa5.99□□□□□ -1.45
CLVS1-202ENST00000518426 NRG2O14511 850 aaPredicted RBP5.99□□□□□ -1.45
CLVS1-202ENST00000518426 SOX11P35716 441 aa5.99□□□□□ -1.45
CLVS1-202ENST00000518426 CDCA8Q53HL2 280 aa5.99□□□□□ -1.45
CLVS1-202ENST00000518426 RETREG3Q86VR2 466 aa5.99□□□□□ -1.45
CLVS1-202ENST00000518426 ANKK1Q8NFD2 765 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms