RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 SIRT1Q96EB6 747 aa15.91■□□□□ 0.14
SPIDR-203ENST00000517693 PRAM1Q96QH2 718 aa15.91■□□□□ 0.14
SPIDR-203ENST00000517693 GTF3C3Q9Y5Q9 886 aa15.91■□□□□ 0.14
SPIDR-203ENST00000517693 RIMS1Q86UR5 1692 aaKnown RBP15.91■□□□□ 0.14
SPIDR-203ENST00000517693 AMER1Q5JTC6 1135 aaPredicted RBP15.91■□□□□ 0.14
SPIDR-203ENST00000517693 SCAF1Q9H7N4 1312 aaKnown RBP15.91■□□□□ 0.14
SPIDR-203ENST00000517693 ADAMTSL3P82987 1691 aa15.9■□□□□ 0.14
SPIDR-203ENST00000517693 CPS1P31327 1500 aa15.9■□□□□ 0.14
SPIDR-203ENST00000517693 ZBED9Q6R2W3 1325 aa15.9■□□□□ 0.14
SPIDR-203ENST00000517693 ANKRD36BQ8N2N9 1353 aa15.9■□□□□ 0.14
SPIDR-203ENST00000517693 BCANQ96GW7 911 aa15.89■□□□□ 0.13
SPIDR-203ENST00000517693 NSD2O96028 1365 aa15.89■□□□□ 0.13
SPIDR-203ENST00000517693 CEBPAP49715 358 aaPredicted RBP15.89■□□□□ 0.13
SPIDR-203ENST00000517693 PNISRQ8TF01 805 aaKnown RBP15.89■□□□□ 0.13
SPIDR-203ENST00000517693 CEP170BQ9Y4F5 1589 aaPredicted RBP15.89■□□□□ 0.13
SPIDR-203ENST00000517693 SRPK2P78362 688 aaKnown RBP15.87■□□□□ 0.13
SPIDR-203ENST00000517693 ZNF142P52746 1687 aaPredicted RBP15.87■□□□□ 0.13
SPIDR-203ENST00000517693 TXNDC2Q86VQ3 553 aa15.87■□□□□ 0.13
SPIDR-203ENST00000517693 CGNL1Q0VF96 1302 aa15.86■□□□□ 0.13
SPIDR-203ENST00000517693 NSD3Q9BZ95 1437 aa15.86■□□□□ 0.13
SPIDR-203ENST00000517693 ADAMTS13Q76LX8 1427 aa15.85■□□□□ 0.13
SPIDR-203ENST00000517693 METP08581 1390 aa15.85■□□□□ 0.13
SPIDR-203ENST00000517693 MINK1Q8N4C8 1332 aaPredicted RBP15.85■□□□□ 0.13
SPIDR-203ENST00000517693 SAFB2Q14151 953 aaKnown RBP eCLIP15.84■□□□□ 0.13
SPIDR-203ENST00000517693 TERF2IPQ9NYB0 399 aa15.84■□□□□ 0.13
SPIDR-203ENST00000517693 MED14O60244 1454 aa15.83■□□□□ 0.13
SPIDR-203ENST00000517693 PPP2R1AP30153 589 aa15.82■□□□□ 0.12
SPIDR-203ENST00000517693 SLC12A5Q9H2X9 1139 aa15.82■□□□□ 0.12
SPIDR-203ENST00000517693 CABP2Q9NPB3 220 aa15.82■□□□□ 0.12
SPIDR-203ENST00000517693 SETD1BQ9UPS6 1966 aaKnown RBP15.82■□□□□ 0.12
SPIDR-203ENST00000517693 HDGFL2Q7Z4V5 671 aaPredicted RBP15.82■□□□□ 0.12
SPIDR-203ENST00000517693 SENP3Q9H4L4 574 aaPredicted RBP15.82■□□□□ 0.12
SPIDR-203ENST00000517693 TBX22Q9Y458 520 aa15.82■□□□□ 0.12
SPIDR-203ENST00000517693 ATP7BP35670 1465 aa15.81■□□□□ 0.12
SPIDR-203ENST00000517693 LTKP29376 864 aa15.81■□□□□ 0.12
SPIDR-203ENST00000517693 CARD14Q9BXL6 1004 aa15.81■□□□□ 0.12
SPIDR-203ENST00000517693 ADGRB2O60241 1585 aa15.81■□□□□ 0.12
SPIDR-203ENST00000517693 PIK3R4Q99570 1358 aa15.81■□□□□ 0.12
SPIDR-203ENST00000517693 CDK19Q9BWU1 502 aa15.8■□□□□ 0.12
SPIDR-203ENST00000517693 PTCH1Q13635 1447 aa15.8■□□□□ 0.12
SPIDR-203ENST00000517693 PLPPR3Q6T4P5 718 aa15.8■□□□□ 0.12
SPIDR-203ENST00000517693 NEFLP07196 543 aa15.78■□□□□ 0.12
SPIDR-203ENST00000517693 WDR43Q15061 677 aaKnown RBP eCLIP15.78■□□□□ 0.12
SPIDR-203ENST00000517693 WASLO00401 505 aaPredicted RBP15.78■□□□□ 0.12
SPIDR-203ENST00000517693 MORC1Q86VD1 984 aa15.78■□□□□ 0.12
SPIDR-203ENST00000517693 A0A1W2PP64 1363 aa15.77■□□□□ 0.12
SPIDR-203ENST00000517693 BLMP54132 1417 aaPredicted RBP15.77■□□□□ 0.12
SPIDR-203ENST00000517693 WAPLQ7Z5K2 1190 aa15.77■□□□□ 0.11
SPIDR-203ENST00000517693 PLEKHH1Q9ULM0 1364 aa15.77■□□□□ 0.11
SPIDR-203ENST00000517693 ANKLE2Q86XL3 938 aa15.75■□□□□ 0.11
SPIDR-203ENST00000517693 POLR3AO14802 1390 aaPredicted RBP15.75■□□□□ 0.11
SPIDR-203ENST00000517693 ANKRD26Q9UPS8 1709 aa15.74■□□□□ 0.11
SPIDR-203ENST00000517693 ROBO2Q9HCK4 1378 aa15.74■□□□□ 0.11
SPIDR-203ENST00000517693 PDE3BQ13370 1112 aa15.73■□□□□ 0.11
SPIDR-203ENST00000517693 CFAP53Q96M91 514 aa15.73■□□□□ 0.11
SPIDR-203ENST00000517693 XRN1Q8IZH2 1706 aaKnown RBP15.72■□□□□ 0.11
SPIDR-203ENST00000517693 CD163L1Q9NR16 1453 aa15.72■□□□□ 0.11
SPIDR-203ENST00000517693 PPIP5K1Q6PFW1 1433 aa15.71■□□□□ 0.11
SPIDR-203ENST00000517693 SMG6Q86US8 1419 aaKnown RBP15.71■□□□□ 0.11
SPIDR-203ENST00000517693 SLC26A8Q96RN1 970 aa15.71■□□□□ 0.11
SPIDR-203ENST00000517693 CCDC61Q9Y6R9 512 aa15.71■□□□□ 0.11
SPIDR-203ENST00000517693 KIF20BQ96Q89 1820 aa15.71■□□□□ 0.11
SPIDR-203ENST00000517693 CDC42BPGQ6DT37 1551 aa15.71■□□□□ 0.11
SPIDR-203ENST00000517693 EDC4Q6P2E9 1401 aaKnown RBP15.71■□□□□ 0.11
SPIDR-203ENST00000517693 NGEFQ8N5V2 710 aa15.71■□□□□ 0.1
SPIDR-203ENST00000517693 CABP1Q9NZU7 370 aa15.71■□□□□ 0.1
SPIDR-203ENST00000517693 AMOTL2Q9Y2J4 779 aa15.71■□□□□ 0.1
SPIDR-203ENST00000517693 PTPRUQ92729 1446 aa15.7■□□□□ 0.1
SPIDR-203ENST00000517693 NUDT16Q96DE0 195 aaKnown RBP15.69■□□□□ 0.1
SPIDR-203ENST00000517693 ZNF692Q9BU19 519 aaPredicted RBP15.69■□□□□ 0.1
SPIDR-203ENST00000517693 ITSN1Q15811 1721 aa15.69■□□□□ 0.1
SPIDR-203ENST00000517693 CPSF1Q10570 1443 aaKnown RBP15.68■□□□□ 0.1
SPIDR-203ENST00000517693 NUDCQ9Y266 331 aa15.68■□□□□ 0.1
SPIDR-203ENST00000517693 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.67■□□□□ 0.1
SPIDR-203ENST00000517693 TOPAZ1Q8N9V7 1692 aa15.67■□□□□ 0.1
SPIDR-203ENST00000517693 MON2Q7Z3U7 1717 aa15.66■□□□□ 0.1
SPIDR-203ENST00000517693 AKAP12Q02952 1782 aa15.66■□□□□ 0.1
SPIDR-203ENST00000517693 ADAMTS8Q9UP79 889 aa15.66■□□□□ 0.1
SPIDR-203ENST00000517693 NPHP4O75161 1426 aaPredicted RBP15.65■□□□□ 0.1
SPIDR-203ENST00000517693 ANKARQ7Z5J8 1434 aa15.65■□□□□ 0.1
SPIDR-203ENST00000517693 FBXO41Q8TF61 875 aa15.64■□□□□ 0.09
SPIDR-203ENST00000517693 FYB1O15117 783 aa15.64■□□□□ 0.09
SPIDR-203ENST00000517693 CHD2O14647 1828 aaKnown RBP15.63■□□□□ 0.09
SPIDR-203ENST00000517693 ERICH6BQ5W0A0 696 aa15.63■□□□□ 0.09
SPIDR-203ENST00000517693 PELP1Q8IZL8 1130 aaKnown RBP15.62■□□□□ 0.09
SPIDR-203ENST00000517693 SUPT16HQ9Y5B9 1047 aaKnown RBP15.62■□□□□ 0.09
SPIDR-203ENST00000517693 PLEKHG3A1L390 1219 aa15.61■□□□□ 0.09
SPIDR-203ENST00000517693 TNNT2P45379 298 aaPredicted RBP15.61■□□□□ 0.09
SPIDR-203ENST00000517693 MTHFSP49914 203 aa15.61■□□□□ 0.09
SPIDR-203ENST00000517693 GGNBP2Q9H3C7 697 aa15.61■□□□□ 0.09
SPIDR-203ENST00000517693 SHPRHQ149N8 1683 aa15.61■□□□□ 0.09
SPIDR-203ENST00000517693 FKBP8Q14318 412 aa15.59■□□□□ 0.09
SPIDR-203ENST00000517693 PRR36Q9H6K5 1346 aa15.59■□□□□ 0.09
SPIDR-203ENST00000517693 KCNA6P17658 529 aa15.59■□□□□ 0.09
SPIDR-203ENST00000517693 NWD1Q149M9 1564 aa15.58■□□□□ 0.08
SPIDR-203ENST00000517693 NRKQ7Z2Y5 1582 aa15.58■□□□□ 0.08
SPIDR-203ENST00000517693 NCBP3Q53F19 620 aaKnown RBP15.58■□□□□ 0.08
SPIDR-203ENST00000517693 COG3Q96JB2 828 aa15.58■□□□□ 0.08
SPIDR-203ENST00000517693 PNNQ9H307 717 aaKnown RBP15.58■□□□□ 0.08
SPIDR-203ENST00000517693 FMN2Q9NZ56 1722 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms