RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 C22orf23Q9BZE7 217 aa15.71■□□□□ 0.1
PCM1-203ENST00000517545 PTPRTO14522 1441 aa15.7■□□□□ 0.1
PCM1-203ENST00000517545 TRAK2O60296 914 aa15.7■□□□□ 0.1
PCM1-203ENST00000517545 PHF23Q9BUL5 403 aaPredicted RBP15.7■□□□□ 0.1
PCM1-203ENST00000517545 STAC3Q96MF2 364 aa15.69■□□□□ 0.1
PCM1-203ENST00000517545 RTEL1-TNFRSF6BF6WH68 1400 aa15.69■□□□□ 0.1
PCM1-203ENST00000517545 AFAP1Q8N556 730 aa15.69■□□□□ 0.1
PCM1-203ENST00000517545 AAMPQ13685 434 aa15.69■□□□□ 0.1
PCM1-203ENST00000517545 NAP1L5Q96NT1 182 aaPredicted RBP15.69■□□□□ 0.1
PCM1-203ENST00000517545 ZMYM3Q14202 1370 aa15.69■□□□□ 0.1
PCM1-203ENST00000517545 MVPQ14764 893 aaKnown RBP15.68■□□□□ 0.1
PCM1-203ENST00000517545 CHMP5Q9NZZ3 219 aa15.68■□□□□ 0.1
PCM1-203ENST00000517545 NSD3Q9BZ95 1437 aa15.68■□□□□ 0.1
PCM1-203ENST00000517545 IQSEC2Q5JU85 1478 aa15.68■□□□□ 0.1
PCM1-203ENST00000517545 WDR63Q8IWG1 891 aa15.68■□□□□ 0.1
PCM1-203ENST00000517545 SLC12A5Q9H2X9 1139 aa15.68■□□□□ 0.1
PCM1-203ENST00000517545 EFCAB2Q5VUJ9 269 aa15.67■□□□□ 0.1
PCM1-203ENST00000517545 SHPRHQ149N8 1683 aa15.67■□□□□ 0.1
PCM1-203ENST00000517545 PNNQ9H307 717 aaKnown RBP15.67■□□□□ 0.1
PCM1-203ENST00000517545 SPAG9O60271 1321 aaKnown RBP15.66■□□□□ 0.1
PCM1-203ENST00000517545 MTHFSP49914 203 aa15.66■□□□□ 0.1
PCM1-203ENST00000517545 CLCN1P35523 988 aa15.66■□□□□ 0.1
PCM1-203ENST00000517545 FTSJ3Q8IY81 847 aaKnown RBP15.66■□□□□ 0.1
PCM1-203ENST00000517545 SHROOM2Q13796 1616 aa15.66■□□□□ 0.1
PCM1-203ENST00000517545 PLCH2O75038 1416 aa15.65■□□□□ 0.1
PCM1-203ENST00000517545 UGGT1Q9NYU2 1555 aa15.65■□□□□ 0.1
PCM1-203ENST00000517545 TSR2Q969E8 191 aaKnown RBP15.65■□□□□ 0.1
PCM1-203ENST00000517545 DZIP1LQ8IYY4 767 aaKnown RBP15.64■□□□□ 0.09
PCM1-203ENST00000517545 ZNF692Q9BU19 519 aaPredicted RBP15.64■□□□□ 0.09
PCM1-203ENST00000517545 ZKSCAN2Q63HK3 967 aa15.64■□□□□ 0.09
PCM1-203ENST00000517545 ABCA6Q8N139 1617 aa15.63■□□□□ 0.09
PCM1-203ENST00000517545 ABCC1P33527 1531 aa15.62■□□□□ 0.09
PCM1-203ENST00000517545 MRE11P49959 708 aa15.62■□□□□ 0.09
PCM1-203ENST00000517545 TRAK1Q9UPV9 953 aa15.62■□□□□ 0.09
PCM1-203ENST00000517545 MYH16Q9H6N6 1097 aa15.62■□□□□ 0.09
PCM1-203ENST00000517545 HSCBQ8IWL3 235 aa15.62■□□□□ 0.09
PCM1-203ENST00000517545 GRPEL1Q9HAV7 217 aa15.62■□□□□ 0.09
PCM1-203ENST00000517545 CCDC27Q2M243 656 aa15.61■□□□□ 0.09
PCM1-203ENST00000517545 KIAA1210Q9ULL0 1709 aa15.61■□□□□ 0.09
PCM1-203ENST00000517545 U2AF1L5P0DN76 240 aaPredicted RBP15.61■□□□□ 0.09
PCM1-203ENST00000517545 TRIM27P14373 513 aa15.61■□□□□ 0.09
PCM1-203ENST00000517545 U2AF1Q01081 240 aaKnown RBP eCLIP15.61■□□□□ 0.09
PCM1-203ENST00000517545 SMC4Q9NTJ3 1288 aa15.61■□□□□ 0.09
PCM1-203ENST00000517545 ERBB4Q15303 1308 aa15.61■□□□□ 0.09
PCM1-203ENST00000517545 MAP3K4Q9Y6R4 1608 aa15.61■□□□□ 0.09
PCM1-203ENST00000517545 KIF3BO15066 747 aa15.61■□□□□ 0.09
PCM1-203ENST00000517545 CYB5RLQ6IPT4 315 aa15.61■□□□□ 0.09
PCM1-203ENST00000517545 ITPRIPQ8IWB1 547 aa15.61■□□□□ 0.09
PCM1-203ENST00000517545 ZNF518AQ6AHZ1 1483 aa15.59■□□□□ 0.09
PCM1-203ENST00000517545 KANK1Q14678 1352 aa15.59■□□□□ 0.09
PCM1-203ENST00000517545 EXOSC9Q06265 439 aaKnown RBP15.59■□□□□ 0.09
PCM1-203ENST00000517545 HDAC1Q13547 482 aaPredicted RBP15.58■□□□□ 0.09
PCM1-203ENST00000517545 DDX11L8A8MPP1 907 aa15.58■□□□□ 0.08
PCM1-203ENST00000517545 DDIT3P35638 169 aa15.58■□□□□ 0.08
PCM1-203ENST00000517545 SSH1Q8WYL5 1049 aa15.58■□□□□ 0.08
PCM1-203ENST00000517545 CFAP53Q96M91 514 aa15.58■□□□□ 0.08
PCM1-203ENST00000517545 GAS2L3Q86XJ1 694 aa15.58■□□□□ 0.08
PCM1-203ENST00000517545 MYOM2P54296 1465 aa15.57■□□□□ 0.08
PCM1-203ENST00000517545 SBNO2Q9Y2G9 1366 aa15.57■□□□□ 0.08
PCM1-203ENST00000517545 ZFYVE16Q7Z3T8 1539 aa15.57■□□□□ 0.08
PCM1-203ENST00000517545 TET3O43151 1660 aa15.57■□□□□ 0.08
PCM1-203ENST00000517545 TNPO1Q92973 898 aaKnown RBP15.57■□□□□ 0.08
PCM1-203ENST00000517545 ESPNB1AK53 854 aa15.56■□□□□ 0.08
PCM1-203ENST00000517545 CHGAP10645 457 aaKnown RBP15.56■□□□□ 0.08
PCM1-203ENST00000517545 TMEM132EQ6IEE7 984 aa15.56■□□□□ 0.08
PCM1-203ENST00000517545 SMC5Q8IY18 1101 aa15.56■□□□□ 0.08
PCM1-203ENST00000517545 NOB1Q9ULX3 412 aaKnown RBP15.56■□□□□ 0.08
PCM1-203ENST00000517545 HSP90AA1P07900 732 aaKnown RBP15.55■□□□□ 0.08
PCM1-203ENST00000517545 TMEM57Q8N5G2 664 aa15.55■□□□□ 0.08
PCM1-203ENST00000517545 NCOA3Q9Y6Q9 1424 aa15.55■□□□□ 0.08
PCM1-203ENST00000517545 ATF7IPQ6VMQ6 1270 aa15.55■□□□□ 0.08
PCM1-203ENST00000517545 LNPKQ9C0E8 428 aa15.55■□□□□ 0.08
PCM1-203ENST00000517545 DDX19BQ9UMR2 479 aa15.55■□□□□ 0.08
PCM1-203ENST00000517545 FOXD4L1Q9NU39 408 aa15.55■□□□□ 0.08
PCM1-203ENST00000517545 DEPDC5O75140 1603 aa15.54■□□□□ 0.08
PCM1-203ENST00000517545 NOS1P29475 1434 aa15.54■□□□□ 0.08
PCM1-203ENST00000517545 HSP90AA2PQ14568 343 aaPredicted RBP15.54■□□□□ 0.08
PCM1-203ENST00000517545 RBM25P49756 843 aaKnown RBP15.53■□□□□ 0.08
PCM1-203ENST00000517545 CD2BP2O95400 341 aaKnown RBP15.52■□□□□ 0.08
PCM1-203ENST00000517545 ZBTB40Q9NUA8 1239 aa15.52■□□□□ 0.08
PCM1-203ENST00000517545 MYO3AQ8NEV4 1616 aa15.52■□□□□ 0.08
PCM1-203ENST00000517545 U2SURPO15042 1029 aaKnown RBP15.52■□□□□ 0.07
PCM1-203ENST00000517545 HSP90AB1P08238 724 aaKnown RBP15.52■□□□□ 0.07
PCM1-203ENST00000517545 TRIM35Q9UPQ4 493 aa15.52■□□□□ 0.07
PCM1-203ENST00000517545 VWDEQ8N2E2 1590 aa15.52■□□□□ 0.07
PCM1-203ENST00000517545 SNX21Q969T3 373 aa15.52■□□□□ 0.07
PCM1-203ENST00000517545 CD109Q6YHK3 1445 aa15.51■□□□□ 0.07
PCM1-203ENST00000517545 MROH2AA6NES4 1674 aa15.51■□□□□ 0.07
PCM1-203ENST00000517545 TMPOP42166 694 aaKnown RBP15.5■□□□□ 0.07
PCM1-203ENST00000517545 NUCB1Q02818 461 aa15.5■□□□□ 0.07
PCM1-203ENST00000517545 NRXN1Q9ULB1 1477 aa15.5■□□□□ 0.07
PCM1-203ENST00000517545 NPM1P06748 294 aaKnown RBP eCLIP15.5■□□□□ 0.07
PCM1-203ENST00000517545 CT47B1P0C2W7 299 aaPredicted RBP15.5■□□□□ 0.07
PCM1-203ENST00000517545 RAB3GAP1Q15042 981 aa15.5■□□□□ 0.07
PCM1-203ENST00000517545 VSIG10Q8N0Z9 540 aa15.5■□□□□ 0.07
PCM1-203ENST00000517545 TRIM44Q96DX7 344 aaPredicted RBP15.5■□□□□ 0.07
PCM1-203ENST00000517545 KIF2CQ99661 725 aa15.5■□□□□ 0.07
PCM1-203ENST00000517545 PLEKHF1Q96S99 279 aa15.5■□□□□ 0.07
PCM1-203ENST00000517545 GLIPR1L2Q4G1C9 344 aa15.49■□□□□ 0.07
PCM1-203ENST00000517545 ISY1Q9ULR0 285 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms