RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 DYRK3O43781 588 aa0.87□□□□□ -2.27
RNU6-1238P-201ENST00000517215 ADAMTS2O95450 1211 aa0.87□□□□□ -2.27
RNU6-1238P-201ENST00000517215 COL8A1P27658 744 aa0.87□□□□□ -2.27
RNU6-1238P-201ENST00000517215 KRTAP10-7P60409 375 aaPredicted RBP0.87□□□□□ -2.27
RNU6-1238P-201ENST00000517215 PROM2Q8N271 834 aa0.87□□□□□ -2.27
RNU6-1238P-201ENST00000517215 TMC2Q8TDI7 906 aa0.87□□□□□ -2.27
RNU6-1238P-201ENST00000517215 ZDHHC16Q969W1 377 aa0.87□□□□□ -2.27
RNU6-1238P-201ENST00000517215 OVOL3O00110 214 aa0.86□□□□□ -2.27
RNU6-1238P-201ENST00000517215 WNT7AO00755 349 aa0.86□□□□□ -2.27
RNU6-1238P-201ENST00000517215 GSC2O15499 205 aa0.86□□□□□ -2.27
RNU6-1238P-201ENST00000517215 SUV39H1O43463 412 aa0.86□□□□□ -2.27
RNU6-1238P-201ENST00000517215 ELNP15502 786 aa0.86□□□□□ -2.27
RNU6-1238P-201ENST00000517215 OGFOD2Q6N063 350 aa0.86□□□□□ -2.27
RNU6-1238P-201ENST00000517215 NEDD1Q8NHV4 660 aa0.86□□□□□ -2.27
RNU6-1238P-201ENST00000517215 CAPN5O15484 640 aaPredicted RBP0.85□□□□□ -2.27
RNU6-1238P-201ENST00000517215 TLL1O43897 1013 aa0.85□□□□□ -2.27
RNU6-1238P-201ENST00000517215 CHRNA4P43681 627 aa0.85□□□□□ -2.27
RNU6-1238P-201ENST00000517215 SAMD7Q7Z3H4 446 aa0.85□□□□□ -2.27
RNU6-1238P-201ENST00000517215 TTC13Q8NBP0 860 aa0.85□□□□□ -2.27
RNU6-1238P-201ENST00000517215 NECTIN2Q92692 538 aa0.85□□□□□ -2.27
RNU6-1238P-201ENST00000517215 TRIM6-TRIM34B2RNG4 842 aa0.84□□□□□ -2.27
RNU6-1238P-201ENST00000517215 ZBTB22O15209 634 aa0.84□□□□□ -2.27
RNU6-1238P-201ENST00000517215 GATA4P43694 442 aa0.84□□□□□ -2.27
RNU6-1238P-201ENST00000517215 NANOS1Q8WY41 292 aaKnown RBP0.84□□□□□ -2.27
RNU6-1238P-201ENST00000517215 PHF8Q9UPP1 1060 aa0.84□□□□□ -2.27
RNU6-1238P-201ENST00000517215 MAN1A2O60476 641 aa0.83□□□□□ -2.28
RNU6-1238P-201ENST00000517215 ADH1BP00325 375 aa0.83□□□□□ -2.28
RNU6-1238P-201ENST00000517215 SNRPNP63162 240 aaKnown RBP0.83□□□□□ -2.28
RNU6-1238P-201ENST00000517215 SRSF11Q05519 484 aaKnown RBP0.83□□□□□ -2.28
RNU6-1238P-201ENST00000517215 GSE1Q14687 1217 aa0.83□□□□□ -2.28
RNU6-1238P-201ENST00000517215 GRIN2CQ14957 1233 aa0.83□□□□□ -2.28
RNU6-1238P-201ENST00000517215 DBX2Q6ZNG2 339 aa0.83□□□□□ -2.28
RNU6-1238P-201ENST00000517215 POU5F2Q8N7G0 328 aa0.83□□□□□ -2.28
RNU6-1238P-201ENST00000517215 MRGPRX2Q96LB1 330 aa0.83□□□□□ -2.28
RNU6-1238P-201ENST00000517215 TMPRSS5Q9H3S3 457 aa0.83□□□□□ -2.28
RNU6-1238P-201ENST00000517215 DBX1A6NMT0 343 aa0.82□□□□□ -2.28
RNU6-1238P-201ENST00000517215 KRTAP10-9P60411 292 aa0.82□□□□□ -2.28
RNU6-1238P-201ENST00000517215 PURBQ96QR8 312 aaKnown RBP0.82□□□□□ -2.28
RNU6-1238P-201ENST00000517215 REPIN1Q9BWE0 567 aaKnown RBP0.82□□□□□ -2.28
RNU6-1238P-201ENST00000517215 SLC6A16Q9GZN6 736 aa0.82□□□□□ -2.28
RNU6-1238P-201ENST00000517215 LRRC4BQ9NT99 713 aa0.82□□□□□ -2.28
RNU6-1238P-201ENST00000517215 PCDHB3Q9Y5E6 796 aa0.82□□□□□ -2.28
RNU6-1238P-201ENST00000517215 RNF40O75150 1001 aa0.81□□□□□ -2.28
RNU6-1238P-201ENST00000517215 BCRP11274 1271 aa0.81□□□□□ -2.28
RNU6-1238P-201ENST00000517215 FOXK1P85037 733 aa0.81□□□□□ -2.28
RNU6-1238P-201ENST00000517215 SCARF1Q14162 830 aa0.81□□□□□ -2.28
RNU6-1238P-201ENST00000517215 MRPL14Q6P1L8 145 aaKnown RBP0.81□□□□□ -2.28
RNU6-1238P-201ENST00000517215 BLOC1S3Q6QNY0 202 aa0.81□□□□□ -2.28
RNU6-1238P-201ENST00000517215 RIC3Q7Z5B4 369 aa0.81□□□□□ -2.28
RNU6-1238P-201ENST00000517215 SH3RF1Q7Z6J0 888 aa0.81□□□□□ -2.28
RNU6-1238P-201ENST00000517215 OXER1Q8TDS5 423 aa0.81□□□□□ -2.28
RNU6-1238P-201ENST00000517215 NAF1Q96HR8 494 aaKnown RBP0.81□□□□□ -2.28
RNU6-1238P-201ENST00000517215 PRR14Q9BWN1 585 aa0.81□□□□□ -2.28
RNU6-1238P-201ENST00000517215 TPSG1Q9NRR2 321 aa0.81□□□□□ -2.28
RNU6-1238P-201ENST00000517215 MKL2Q9ULH7 1088 aa0.81□□□□□ -2.28
RNU6-1238P-201ENST00000517215 OAS3Q9Y6K5 1087 aaKnown RBP0.81□□□□□ -2.28
RNU6-1238P-201ENST00000517215 NLRP6P59044 892 aa0.8□□□□□ -2.28
RNU6-1238P-201ENST00000517215 KRTAP19-4Q3LI73 84 aa0.8□□□□□ -2.28
RNU6-1238P-201ENST00000517215 PLPP6Q8IY26 295 aa0.8□□□□□ -2.28
RNU6-1238P-201ENST00000517215 VWA5B2Q8N398 1253 aa0.8□□□□□ -2.28
RNU6-1238P-201ENST00000517215 SUV39H2Q9H5I1 410 aa0.8□□□□□ -2.28
RNU6-1238P-201ENST00000517215 ACSS3Q9H6R3 686 aa0.8□□□□□ -2.28
RNU6-1238P-201ENST00000517215 PCMTD2Q9NV79 361 aa0.8□□□□□ -2.28
RNU6-1238P-201ENST00000517215 SV2AQ7L0J3 742 aa0.79□□□□□ -2.28
RNU6-1238P-201ENST00000517215 PACS2Q86VP3 889 aa0.79□□□□□ -2.28
RNU6-1238P-201ENST00000517215 ZDHHC13Q8IUH4 622 aa0.79□□□□□ -2.28
RNU6-1238P-201ENST00000517215 FBXO22Q8NEZ5 403 aa0.79□□□□□ -2.28
RNU6-1238P-201ENST00000517215 FBXW7Q969H0 707 aa0.79□□□□□ -2.28
RNU6-1238P-201ENST00000517215 CDC14CA4D256 554 aa0.78□□□□□ -2.28
RNU6-1238P-201ENST00000517215 KRTAP5-8O75690 187 aa0.78□□□□□ -2.28
RNU6-1238P-201ENST00000517215 ONECUT2O95948 504 aa0.78□□□□□ -2.28
RNU6-1238P-201ENST00000517215 ALDH1A1P00352 501 aa0.78□□□□□ -2.28
RNU6-1238P-201ENST00000517215 ZNF124Q15973 351 aa0.78□□□□□ -2.28
RNU6-1238P-201ENST00000517215 GGNQ86UU5 652 aa0.78□□□□□ -2.28
RNU6-1238P-201ENST00000517215 NTN5Q8WTR8 489 aaPredicted RBP0.78□□□□□ -2.28
RNU6-1238P-201ENST00000517215 SLC4A1APQ9BWU0 796 aaKnown RBP0.78□□□□□ -2.28
RNU6-1238P-201ENST00000517215 RAPGEFL1Q9UHV5 662 aa0.78□□□□□ -2.28
RNU6-1238P-201ENST00000517215 RNF112Q9ULX5 631 aa0.78□□□□□ -2.28
RNU6-1238P-201ENST00000517215 FCF1Q9Y324 198 aaKnown RBP0.78□□□□□ -2.28
RNU6-1238P-201ENST00000517215 PIK3R2O00459 728 aa0.77□□□□□ -2.29
RNU6-1238P-201ENST00000517215 ZBTB24O43167 697 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1238P-201ENST00000517215 H2AFB1P0C5Y9 115 aa0.77□□□□□ -2.29
RNU6-1238P-201ENST00000517215 H2AFB2P0C5Z0 115 aa0.77□□□□□ -2.29
RNU6-1238P-201ENST00000517215 HDGFP51858 240 aaKnown RBP0.77□□□□□ -2.29
RNU6-1238P-201ENST00000517215 GP2P55259 537 aaKnown RBP0.77□□□□□ -2.29
RNU6-1238P-201ENST00000517215 HNRNPA0Q13151 305 aaKnown RBP0.77□□□□□ -2.29
RNU6-1238P-201ENST00000517215 GAS6Q14393 721 aa0.77□□□□□ -2.29
RNU6-1238P-201ENST00000517215 TYW1BQ6NUM6 668 aa0.77□□□□□ -2.29
RNU6-1238P-201ENST00000517215 SLF2Q8IX21 1173 aa0.77□□□□□ -2.29
RNU6-1238P-201ENST00000517215 MICALL1Q8N3F8 863 aa0.77□□□□□ -2.29
RNU6-1238P-201ENST00000517215 TRIM52Q96A61 297 aa0.77□□□□□ -2.29
RNU6-1238P-201ENST00000517215 KRTAP4-3Q9BYR4 195 aa0.77□□□□□ -2.29
RNU6-1238P-201ENST00000517215 PCDHGA10Q9Y5H3 936 aa0.77□□□□□ -2.29
RNU6-1238P-201ENST00000517215 SMAPO00193 183 aa0.76□□□□□ -2.29
RNU6-1238P-201ENST00000517215 PTSQ03393 145 aa0.76□□□□□ -2.29
RNU6-1238P-201ENST00000517215 TRIM32Q13049 653 aa0.76□□□□□ -2.29
RNU6-1238P-201ENST00000517215 CCDC155Q8N6L0 562 aa0.76□□□□□ -2.29
RNU6-1238P-201ENST00000517215 UPF1Q92900 1129 aaKnown RBP eCLIP0.76□□□□□ -2.29
RNU6-1238P-201ENST00000517215 ACDQ96AP0 544 aa0.76□□□□□ -2.29
RNU6-1238P-201ENST00000517215 CRELD1Q96HD1 420 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms