RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 DESI1Q6ICB0 168 aa2.23□□□□□ -2.05
RN7SKP88-201ENST00000516847 SND1Q7KZF4 910 aaKnown RBP eCLIP2.23□□□□□ -2.05
RN7SKP88-201ENST00000516847 NFATC2IPQ8NCF5 419 aa2.23□□□□□ -2.05
RN7SKP88-201ENST00000516847 PNMA1Q8ND90 353 aa2.23□□□□□ -2.05
RN7SKP88-201ENST00000516847 KHSRPQ92945 711 aaKnown RBP eCLIP2.23□□□□□ -2.05
RN7SKP88-201ENST00000516847 KCNH8Q96L42 1107 aa2.23□□□□□ -2.05
RN7SKP88-201ENST00000516847 UCN2Q96RP3 112 aa2.23□□□□□ -2.05
RN7SKP88-201ENST00000516847 SLC4A5Q9BY07 1137 aa2.23□□□□□ -2.05
RN7SKP88-201ENST00000516847 HMX1Q9NP08 348 aaPredicted RBP2.23□□□□□ -2.05
RN7SKP88-201ENST00000516847 PCDHGC3Q9UN70 934 aa2.23□□□□□ -2.05
RN7SKP88-201ENST00000516847 CFAP99D6REC4 459 aa2.22□□□□□ -2.05
RN7SKP88-201ENST00000516847 ATP9BO43861 1147 aa2.22□□□□□ -2.05
RN7SKP88-201ENST00000516847 SLC10A3P09131 477 aa2.22□□□□□ -2.05
RN7SKP88-201ENST00000516847 EIF4G2P78344 907 aaKnown RBP eCLIP2.22□□□□□ -2.05
RN7SKP88-201ENST00000516847 CTDSPL2Q05D32 466 aa2.22□□□□□ -2.05
RN7SKP88-201ENST00000516847 VAC14Q08AM6 782 aa2.22□□□□□ -2.05
RN7SKP88-201ENST00000516847 CCDC27Q2M243 656 aa2.22□□□□□ -2.05
RN7SKP88-201ENST00000516847 SLF2Q8IX21 1173 aa2.22□□□□□ -2.05
RN7SKP88-201ENST00000516847 ZNF592Q92610 1267 aa2.22□□□□□ -2.05
RN7SKP88-201ENST00000516847 ZBED2Q9BTP6 218 aa2.22□□□□□ -2.05
RN7SKP88-201ENST00000516847 MAFBQ9Y5Q3 323 aaPredicted RBP2.22□□□□□ -2.05
RN7SKP88-201ENST00000516847 ZC3H4Q9UPT8 1303 aaKnown RBP2.21□□□□□ -2.06
RN7SKP88-201ENST00000516847 E9PSI1 815 aa2.21□□□□□ -2.06
RN7SKP88-201ENST00000516847 SNPHO15079 494 aa2.21□□□□□ -2.06
RN7SKP88-201ENST00000516847 HOXB1P14653 301 aaPredicted RBP2.21□□□□□ -2.06
RN7SKP88-201ENST00000516847 ERCC3P19447 782 aa2.21□□□□□ -2.06
RN7SKP88-201ENST00000516847 RFX1P22670 979 aa2.21□□□□□ -2.06
RN7SKP88-201ENST00000516847 LMOD1P29536 600 aaPredicted RBP2.21□□□□□ -2.06
RN7SKP88-201ENST00000516847 ATP6V1AP38606 617 aa2.21□□□□□ -2.06
RN7SKP88-201ENST00000516847 HDGFP51858 240 aaKnown RBP2.21□□□□□ -2.06
RN7SKP88-201ENST00000516847 NR1H3Q13133 447 aa2.21□□□□□ -2.06
RN7SKP88-201ENST00000516847 SEMA3FQ13275 785 aa2.21□□□□□ -2.06
RN7SKP88-201ENST00000516847 FAM98CQ17RN3 349 aaKnown RBP2.21□□□□□ -2.06
RN7SKP88-201ENST00000516847 PROX2Q3B8N5 592 aa2.21□□□□□ -2.06
RN7SKP88-201ENST00000516847 SWT1Q5T5J6 900 aaKnown RBP2.21□□□□□ -2.06
RN7SKP88-201ENST00000516847 MAMSTRQ6ZN01 415 aa2.21□□□□□ -2.06
RN7SKP88-201ENST00000516847 RETREG3Q86VR2 466 aa2.21□□□□□ -2.06
RN7SKP88-201ENST00000516847 PLEKHM2Q8IWE5 1019 aa2.21□□□□□ -2.06
RN7SKP88-201ENST00000516847 PRR7Q8TB68 274 aa2.21□□□□□ -2.06
RN7SKP88-201ENST00000516847 LRRN4Q8WUT4 740 aa2.21□□□□□ -2.06
RN7SKP88-201ENST00000516847 VRTNQ9H8Y1 702 aa2.21□□□□□ -2.06
RN7SKP88-201ENST00000516847 TFIP11Q9UBB9 837 aaKnown RBP2.21□□□□□ -2.06
RN7SKP88-201ENST00000516847 RABGEF1Q9UJ41 708 aa2.21□□□□□ -2.06
RN7SKP88-201ENST00000516847 IVNS1ABPQ9Y6Y0 642 aa2.21□□□□□ -2.06
RN7SKP88-201ENST00000516847 FAM196BA6NMK8 535 aa2.2□□□□□ -2.06
RN7SKP88-201ENST00000516847 C6orf229H3BNL8 230 aa2.2□□□□□ -2.06
RN7SKP88-201ENST00000516847 SMAPO00193 183 aa2.2□□□□□ -2.06
RN7SKP88-201ENST00000516847 CFHP08603 1231 aa2.2□□□□□ -2.06
RN7SKP88-201ENST00000516847 RBM25P49756 843 aaKnown RBP2.2□□□□□ -2.06
RN7SKP88-201ENST00000516847 GUCA2AQ02747 115 aa2.2□□□□□ -2.06
RN7SKP88-201ENST00000516847 FUT2Q10981 343 aa2.2□□□□□ -2.06
RN7SKP88-201ENST00000516847 Q3C1V9 767 aa2.2□□□□□ -2.06
RN7SKP88-201ENST00000516847 LAPTM4BQ86VI4 370 aa2.2□□□□□ -2.06
RN7SKP88-201ENST00000516847 KCNK17Q96T54 332 aa2.2□□□□□ -2.06
RN7SKP88-201ENST00000516847 SCUBE2Q9NQ36 999 aa2.2□□□□□ -2.06
RN7SKP88-201ENST00000516847 KIAA1468Q9P260 1216 aa2.2□□□□□ -2.06
RN7SKP88-201ENST00000516847 SALL2Q9Y467 1007 aaPredicted RBP2.2□□□□□ -2.06
RN7SKP88-201ENST00000516847 ZBBXA8MT70 800 aa2.19□□□□□ -2.06
RN7SKP88-201ENST00000516847 LZTS3O60299 673 aaPredicted RBP2.19□□□□□ -2.06
RN7SKP88-201ENST00000516847 PBX2P40425 430 aa2.19□□□□□ -2.06
RN7SKP88-201ENST00000516847 MCCD1P59942 119 aaPredicted RBP2.19□□□□□ -2.06
RN7SKP88-201ENST00000516847 NR6A1Q15406 480 aa2.19□□□□□ -2.06
RN7SKP88-201ENST00000516847 KMT5BQ4FZB7 885 aa2.19□□□□□ -2.06
RN7SKP88-201ENST00000516847 KANK4Q5T7N3 995 aaPredicted RBP2.19□□□□□ -2.06
RN7SKP88-201ENST00000516847 FOXD4L5Q5VV16 416 aaPredicted RBP2.19□□□□□ -2.06
RN7SKP88-201ENST00000516847 LYPD8Q6UX82 237 aa2.19□□□□□ -2.06
RN7SKP88-201ENST00000516847 TBC1D9Q6ZT07 1266 aa2.19□□□□□ -2.06
RN7SKP88-201ENST00000516847 TXNDC2Q86VQ3 553 aa2.19□□□□□ -2.06
RN7SKP88-201ENST00000516847 CCER1Q8TC90 406 aaPredicted RBP2.19□□□□□ -2.06
RN7SKP88-201ENST00000516847 EPS8L1Q8TE68 723 aa2.19□□□□□ -2.06
RN7SKP88-201ENST00000516847 FOXD4L4Q8WXT5 416 aaPredicted RBP2.19□□□□□ -2.06
RN7SKP88-201ENST00000516847 TSC1Q92574 1164 aa2.19□□□□□ -2.06
RN7SKP88-201ENST00000516847 GPKOWQ92917 476 aaPredicted RBP eCLIP2.19□□□□□ -2.06
RN7SKP88-201ENST00000516847 HLA-CQ95604 372 aa2.19□□□□□ -2.06
RN7SKP88-201ENST00000516847 PRR14Q9BWN1 585 aa2.19□□□□□ -2.06
RN7SKP88-201ENST00000516847 NBPF3Q9H094 633 aa2.19□□□□□ -2.06
RN7SKP88-201ENST00000516847 GPSM3Q9Y4H4 160 aa2.19□□□□□ -2.06
RN7SKP88-201ENST00000516847 RBM47A0AV96 593 aaKnown RBP2.18□□□□□ -2.06
RN7SKP88-201ENST00000516847 USP17L3A6NCW0 530 aa2.18□□□□□ -2.06
RN7SKP88-201ENST00000516847 USP17L4A6NCW7 530 aa2.18□□□□□ -2.06
RN7SKP88-201ENST00000516847 USP17L5A8MUK1 530 aa2.18□□□□□ -2.06
RN7SKP88-201ENST00000516847 ATP5J2-PTCD1G3V325 749 aa2.18□□□□□ -2.06
RN7SKP88-201ENST00000516847 ARHGAP33O14559 1287 aa2.18□□□□□ -2.06
RN7SKP88-201ENST00000516847 PER1O15534 1290 aaPredicted RBP2.18□□□□□ -2.06
RN7SKP88-201ENST00000516847 ACTN4O43707 911 aaKnown RBP2.18□□□□□ -2.06
RN7SKP88-201ENST00000516847 F12P00748 615 aaPredicted RBP2.18□□□□□ -2.06
RN7SKP88-201ENST00000516847 FBXO45P0C2W1 286 aa2.18□□□□□ -2.06
RN7SKP88-201ENST00000516847 POTEJP0CG39 1038 aa2.18□□□□□ -2.06
RN7SKP88-201ENST00000516847 ARID4AP29374 1257 aaPredicted RBP2.18□□□□□ -2.06
RN7SKP88-201ENST00000516847 PTPRNQ16849 979 aa2.18□□□□□ -2.06
RN7SKP88-201ENST00000516847 SWI5Q1ZZU3 235 aa2.18□□□□□ -2.06
RN7SKP88-201ENST00000516847 MORN1Q5T089 497 aa2.18□□□□□ -2.06
RN7SKP88-201ENST00000516847 TMEM164Q5U3C3 297 aa2.18□□□□□ -2.06
RN7SKP88-201ENST00000516847 USP17L2Q6R6M4 530 aa2.18□□□□□ -2.06
RN7SKP88-201ENST00000516847 USP17L1Q7RTZ2 530 aa2.18□□□□□ -2.06
RN7SKP88-201ENST00000516847 FKBPLQ9UIM3 349 aa2.18□□□□□ -2.06
RN7SKP88-201ENST00000516847 ZMIZ1Q9ULJ6 1067 aa2.18□□□□□ -2.06
RN7SKP88-201ENST00000516847 NOVA2Q9UNW9 492 aaKnown RBP2.18□□□□□ -2.06
RN7SKP88-201ENST00000516847 CARNS1A5YM72 827 aa2.17□□□□□ -2.06
RN7SKP88-201ENST00000516847 USP17L15C9J2P7 530 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms