RNA–Protein interactions for RNA: ENST00000516460.1

RNU4ATAC12P-201, Transcript of RNA, U4atac small nuclear 12, pseudogene, humanhuman

BASIC

Gene RNU4ATAC12P, Length 113 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC12P-201ENST00000516460 STK26Q9P289 416 aa12.6□□□□□ -0.39
RNU4ATAC12P-201ENST00000516460 NSD3Q9BZ95 1437 aa12.6□□□□□ -0.39
RNU4ATAC12P-201ENST00000516460 FKBP8Q14318 412 aa12.59□□□□□ -0.39
RNU4ATAC12P-201ENST00000516460 PELP1Q8IZL8 1130 aaKnown RBP12.59□□□□□ -0.39
RNU4ATAC12P-201ENST00000516460 PRAM1Q96QH2 718 aa12.59□□□□□ -0.39
RNU4ATAC12P-201ENST00000516460 CARD14Q9BXL6 1004 aa12.59□□□□□ -0.39
RNU4ATAC12P-201ENST00000516460 TECPR2O15040 1411 aa12.58□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 PDE3BQ13370 1112 aa12.58□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 ERICH6BQ5W0A0 696 aa12.58□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 SIRT1Q96EB6 747 aa12.58□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 NUDCQ9Y266 331 aa12.58□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 CGNL1Q0VF96 1302 aa12.58□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 CPS1P31327 1500 aa12.57□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 FAM135BQ49AJ0 1406 aa12.57□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 SLC12A5Q9H2X9 1139 aa12.57□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 SLIT1O75093 1534 aa12.57□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 PLEKHG1Q9ULL1 1385 aa12.56□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 SRPK2P78362 688 aaKnown RBP12.56□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 WDR43Q15061 677 aaKnown RBP eCLIP12.56□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 ANKRD26Q9UPS8 1709 aa12.56□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 ARHGAP23Q9P227 1491 aa12.55□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 SAFB2Q14151 953 aaKnown RBP eCLIP12.55□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 CABP2Q9NPB3 220 aa12.55□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 TERF2IPQ9NYB0 399 aa12.55□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 MINK1Q8N4C8 1332 aaPredicted RBP12.55□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 POLR3AO14802 1390 aaPredicted RBP12.55□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 MORC1Q86VD1 984 aa12.54□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 DIP2AQ14689 1571 aa12.53□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 EID1Q9Y6B2 187 aa12.53□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 METP08581 1390 aa12.53□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 ADAMTS13Q76LX8 1427 aa12.53□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 MED14O60244 1454 aa12.53□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 ATP7BP35670 1465 aa12.53□□□□□ -0.4
RNU4ATAC12P-201ENST00000516460 CDK19Q9BWU1 502 aa12.52□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 A0A1W2PP64 1363 aa12.52□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 KIF20BQ96Q89 1820 aa12.51□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 HDGFL2Q7Z4V5 671 aaPredicted RBP12.51□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 NGEFQ8N5V2 710 aa12.51□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 SENP3Q9H4L4 574 aaPredicted RBP12.51□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 ADAMTS8Q9UP79 889 aa12.51□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 ADGRB2O60241 1585 aa12.51□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 RIMS1Q86UR5 1692 aaKnown RBP12.51□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 CEBPAP49715 358 aaPredicted RBP12.5□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 THEMISQ8N1K5 641 aaPredicted RBP12.5□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 BCANQ96GW7 911 aa12.5□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 ADAMTSL3P82987 1691 aa12.49□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 CD163L1Q9NR16 1453 aa12.49□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 PLEKHH1Q9ULM0 1364 aa12.49□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 TXNDC2Q86VQ3 553 aa12.49□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 CFAP53Q96M91 514 aa12.49□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 ZNF142P52746 1687 aaPredicted RBP12.48□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 SHPRHQ149N8 1683 aa12.48□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 CEP170BQ9Y4F5 1589 aaPredicted RBP12.48□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 RNF123Q5XPI4 1314 aa12.48□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 WASLO00401 505 aaPredicted RBP12.48□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 SETD1BQ9UPS6 1966 aaKnown RBP12.48□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 LTKP29376 864 aa12.47□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 WAPLQ7Z5K2 1190 aa12.47□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 ITSN1Q15811 1721 aa12.46□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 TBX22Q9Y458 520 aa12.46□□□□□ -0.41
RNU4ATAC12P-201ENST00000516460 CDC42BPGQ6DT37 1551 aa12.46□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 AKAP12Q02952 1782 aa12.46□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 MON2Q7Z3U7 1717 aa12.45□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 PTCH1Q13635 1447 aa12.45□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 CABP1Q9NZU7 370 aa12.44□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 CPSF1Q10570 1443 aaKnown RBP12.44□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 EDC4Q6P2E9 1401 aaKnown RBP12.44□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 PPIP5K1Q6PFW1 1433 aa12.44□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 PIK3R4Q99570 1358 aa12.43□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 ROBO2Q9HCK4 1378 aa12.43□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 XRN1Q8IZH2 1706 aaKnown RBP12.43□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 TOPAZ1Q8N9V7 1692 aa12.43□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 PPP4R2Q9NY27 417 aa12.43□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.42□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 ZNF521Q96K83 1311 aa12.42□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 FYB1O15117 783 aa12.42□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 MTHFSP49914 203 aa12.42□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 CCDC61Q9Y6R9 512 aa12.42□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 TNNT2P45379 298 aaPredicted RBP12.41□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 NCBP3Q53F19 620 aaKnown RBP12.41□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 PTPRUQ92729 1446 aa12.41□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 NUDT16Q96DE0 195 aaKnown RBP12.41□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 RCAN3Q9UKA8 241 aa12.41□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 SALL2Q9Y467 1007 aaPredicted RBP12.41□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 SENP3-EIF4A1A0A087X0R7 540 aa12.4□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 ZNF692Q9BU19 519 aaPredicted RBP12.4□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 GGNBP2Q9H3C7 697 aa12.4□□□□□ -0.42
RNU4ATAC12P-201ENST00000516460 IRX6P78412 446 aaPredicted RBP12.39□□□□□ -0.43
RNU4ATAC12P-201ENST00000516460 GOLGA2Q08379 1002 aa12.39□□□□□ -0.43
RNU4ATAC12P-201ENST00000516460 PLPPR3Q6T4P5 718 aa12.39□□□□□ -0.43
RNU4ATAC12P-201ENST00000516460 RUNDC1Q96C34 613 aa12.39□□□□□ -0.43
RNU4ATAC12P-201ENST00000516460 COL3A1P02461 1466 aaPredicted RBP12.39□□□□□ -0.43
RNU4ATAC12P-201ENST00000516460 IQSEC2Q5JU85 1478 aa12.39□□□□□ -0.43
RNU4ATAC12P-201ENST00000516460 APAF1O14727 1248 aa12.38□□□□□ -0.43
RNU4ATAC12P-201ENST00000516460 CCDC146Q8IYE0 955 aa12.38□□□□□ -0.43
RNU4ATAC12P-201ENST00000516460 CDCA7LQ96GN5 454 aa12.38□□□□□ -0.43
RNU4ATAC12P-201ENST00000516460 SLC26A8Q96RN1 970 aa12.38□□□□□ -0.43
RNU4ATAC12P-201ENST00000516460 AMOTL2Q9Y2J4 779 aa12.38□□□□□ -0.43
RNU4ATAC12P-201ENST00000516460 RRP1P56182 461 aaKnown RBP12.37□□□□□ -0.43
RNU4ATAC12P-201ENST00000516460 MAP2P11137 1827 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms