RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 CNGB1Q14028 1251 aaPredicted RBP10.43□□□□□ -0.74
SCARNA20.1-201ENST00000516009 PLEKHH1Q9ULM0 1364 aa10.42□□□□□ -0.74
SCARNA20.1-201ENST00000516009 XRN1Q8IZH2 1706 aaKnown RBP10.42□□□□□ -0.74
SCARNA20.1-201ENST00000516009 SRPK2P78362 688 aaKnown RBP10.42□□□□□ -0.74
SCARNA20.1-201ENST00000516009 RALBP1Q15311 655 aa10.42□□□□□ -0.74
SCARNA20.1-201ENST00000516009 WAPLQ7Z5K2 1190 aa10.42□□□□□ -0.74
SCARNA20.1-201ENST00000516009 KNSTRNQ9Y448 316 aa10.42□□□□□ -0.74
SCARNA20.1-201ENST00000516009 ATAD2Q6PL18 1390 aa10.41□□□□□ -0.74
SCARNA20.1-201ENST00000516009 PIK3R4Q99570 1358 aa10.41□□□□□ -0.74
SCARNA20.1-201ENST00000516009 TMC1Q8TDI8 760 aa10.41□□□□□ -0.74
SCARNA20.1-201ENST00000516009 CABP2Q9NPB3 220 aa10.41□□□□□ -0.74
SCARNA20.1-201ENST00000516009 CHD2O14647 1828 aaKnown RBP10.41□□□□□ -0.74
SCARNA20.1-201ENST00000516009 PTPRUQ92729 1446 aa10.41□□□□□ -0.74
SCARNA20.1-201ENST00000516009 PARD3Q8TEW0 1356 aa10.4□□□□□ -0.74
SCARNA20.1-201ENST00000516009 ROBO2Q9HCK4 1378 aa10.4□□□□□ -0.74
SCARNA20.1-201ENST00000516009 NINLQ9Y2I6 1382 aa10.4□□□□□ -0.74
SCARNA20.1-201ENST00000516009 ADGRB2O60241 1585 aa10.4□□□□□ -0.74
SCARNA20.1-201ENST00000516009 CENPBP07199 599 aaPredicted RBP10.4□□□□□ -0.74
SCARNA20.1-201ENST00000516009 CDK19Q9BWU1 502 aa10.4□□□□□ -0.74
SCARNA20.1-201ENST00000516009 PTCH1Q13635 1447 aa10.4□□□□□ -0.75
SCARNA20.1-201ENST00000516009 USP32Q8NFA0 1604 aa10.4□□□□□ -0.75
SCARNA20.1-201ENST00000516009 MYBBP1AQ9BQG0 1328 aaKnown RBP10.39□□□□□ -0.75
SCARNA20.1-201ENST00000516009 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.39□□□□□ -0.75
SCARNA20.1-201ENST00000516009 CC2D1BQ5T0F9 858 aaKnown RBP10.39□□□□□ -0.75
SCARNA20.1-201ENST00000516009 SLC12A5Q9H2X9 1139 aa10.39□□□□□ -0.75
SCARNA20.1-201ENST00000516009 MRS2Q9HD23 443 aa10.39□□□□□ -0.75
SCARNA20.1-201ENST00000516009 AMOTL2Q9Y2J4 779 aa10.39□□□□□ -0.75
SCARNA20.1-201ENST00000516009 NPHP4O75161 1426 aaPredicted RBP10.39□□□□□ -0.75
SCARNA20.1-201ENST00000516009 NPC1L1Q9UHC9 1359 aa10.39□□□□□ -0.75
SCARNA20.1-201ENST00000516009 ANKRD36BQ8N2N9 1353 aa10.38□□□□□ -0.75
SCARNA20.1-201ENST00000516009 KDM4FA0A1W2PPD8 638 aa10.37□□□□□ -0.75
SCARNA20.1-201ENST00000516009 WASLO00401 505 aaPredicted RBP10.37□□□□□ -0.75
SCARNA20.1-201ENST00000516009 CCDC184Q52MB2 194 aa10.37□□□□□ -0.75
SCARNA20.1-201ENST00000516009 AMER1Q5JTC6 1135 aaPredicted RBP10.37□□□□□ -0.75
SCARNA20.1-201ENST00000516009 BRD4O60885 1362 aaPredicted RBP10.37□□□□□ -0.75
SCARNA20.1-201ENST00000516009 NSD3Q9BZ95 1437 aa10.36□□□□□ -0.75
SCARNA20.1-201ENST00000516009 CARD14Q9BXL6 1004 aa10.36□□□□□ -0.75
SCARNA20.1-201ENST00000516009 TERF2IPQ9NYB0 399 aa10.36□□□□□ -0.75
SCARNA20.1-201ENST00000516009 ITSN1Q15811 1721 aa10.36□□□□□ -0.75
SCARNA20.1-201ENST00000516009 NLRP13Q86W25 1043 aa10.35□□□□□ -0.75
SCARNA20.1-201ENST00000516009 ATP7BP35670 1465 aa10.35□□□□□ -0.75
SCARNA20.1-201ENST00000516009 KIF20BQ96Q89 1820 aa10.35□□□□□ -0.75
SCARNA20.1-201ENST00000516009 NCKAP5LQ9HCH0 1330 aa10.34□□□□□ -0.75
SCARNA20.1-201ENST00000516009 ANKRD26Q9UPS8 1709 aa10.34□□□□□ -0.75
SCARNA20.1-201ENST00000516009 HDGFL2Q7Z4V5 671 aaPredicted RBP10.34□□□□□ -0.75
SCARNA20.1-201ENST00000516009 A0A1W2PP64 1363 aa10.34□□□□□ -0.75
SCARNA20.1-201ENST00000516009 NWD1Q149M9 1564 aa10.34□□□□□ -0.75
SCARNA20.1-201ENST00000516009 TOPAZ1Q8N9V7 1692 aa10.34□□□□□ -0.75
SCARNA20.1-201ENST00000516009 AKAP12Q02952 1782 aa10.34□□□□□ -0.75
SCARNA20.1-201ENST00000516009 CGNL1Q0VF96 1302 aa10.33□□□□□ -0.76
SCARNA20.1-201ENST00000516009 KCNA6P17658 529 aa10.33□□□□□ -0.76
SCARNA20.1-201ENST00000516009 NUDT16Q96DE0 195 aaKnown RBP10.33□□□□□ -0.76
SCARNA20.1-201ENST00000516009 CD163L1Q9NR16 1453 aa10.33□□□□□ -0.76
SCARNA20.1-201ENST00000516009 MON2Q7Z3U7 1717 aa10.33□□□□□ -0.76
SCARNA20.1-201ENST00000516009 NALCNQ8IZF0 1738 aa10.33□□□□□ -0.76
SCARNA20.1-201ENST00000516009 PPIP5K1Q6PFW1 1433 aa10.33□□□□□ -0.76
SCARNA20.1-201ENST00000516009 RGPD8O14715 1765 aaPredicted RBP10.32□□□□□ -0.76
SCARNA20.1-201ENST00000516009 CDC42BPGQ6DT37 1551 aa10.32□□□□□ -0.76
SCARNA20.1-201ENST00000516009 NSD2O96028 1365 aa10.32□□□□□ -0.76
SCARNA20.1-201ENST00000516009 FAM9BQ8IZU0 186 aa10.32□□□□□ -0.76
SCARNA20.1-201ENST00000516009 CABP1Q9NZU7 370 aa10.32□□□□□ -0.76
SCARNA20.1-201ENST00000516009 CCDC61Q9Y6R9 512 aa10.32□□□□□ -0.76
SCARNA20.1-201ENST00000516009 FMN2Q9NZ56 1722 aa10.32□□□□□ -0.76
SCARNA20.1-201ENST00000516009 LMTK3Q96Q04 1460 aa10.31□□□□□ -0.76
SCARNA20.1-201ENST00000516009 PPP2R1AP30153 589 aa10.31□□□□□ -0.76
SCARNA20.1-201ENST00000516009 MORC1Q86VD1 984 aa10.3□□□□□ -0.76
SCARNA20.1-201ENST00000516009 PNISRQ8TF01 805 aaKnown RBP10.3□□□□□ -0.76
SCARNA20.1-201ENST00000516009 PRR36Q9H6K5 1346 aa10.3□□□□□ -0.76
SCARNA20.1-201ENST00000516009 STRCQ7RTU9 1775 aa10.29□□□□□ -0.76
SCARNA20.1-201ENST00000516009 HSPA2P54652 639 aa10.29□□□□□ -0.76
SCARNA20.1-201ENST00000516009 CPSF1Q10570 1443 aaKnown RBP10.29□□□□□ -0.76
SCARNA20.1-201ENST00000516009 NKTRP30414 1462 aaKnown RBP10.29□□□□□ -0.76
SCARNA20.1-201ENST00000516009 EDC4Q6P2E9 1401 aaKnown RBP10.28□□□□□ -0.76
SCARNA20.1-201ENST00000516009 ANKARQ7Z5J8 1434 aa10.28□□□□□ -0.76
SCARNA20.1-201ENST00000516009 ADGRL3Q9HAR2 1447 aa10.28□□□□□ -0.76
SCARNA20.1-201ENST00000516009 HNRNPUQ00839 825 aaKnown RBP eCLIP10.28□□□□□ -0.76
SCARNA20.1-201ENST00000516009 NUTM2FA1L443 756 aa10.27□□□□□ -0.77
SCARNA20.1-201ENST00000516009 ZNF692Q9BU19 519 aaPredicted RBP10.27□□□□□ -0.77
SCARNA20.1-201ENST00000516009 NRKQ7Z2Y5 1582 aa10.26□□□□□ -0.77
SCARNA20.1-201ENST00000516009 STRCP1A6NGW2 1772 aa10.26□□□□□ -0.77
SCARNA20.1-201ENST00000516009 PLEKHG3A1L390 1219 aa10.26□□□□□ -0.77
SCARNA20.1-201ENST00000516009 FYB1O15117 783 aa10.25□□□□□ -0.77
SCARNA20.1-201ENST00000516009 C14orf37Q86TY3 774 aa10.25□□□□□ -0.77
SCARNA20.1-201ENST00000516009 PROSER2Q86WR7 435 aaPredicted RBP10.25□□□□□ -0.77
SCARNA20.1-201ENST00000516009 GGNBP2Q9H3C7 697 aa10.25□□□□□ -0.77
SCARNA20.1-201ENST00000516009 TNNT2P45379 298 aaPredicted RBP10.24□□□□□ -0.77
SCARNA20.1-201ENST00000516009 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.24□□□□□ -0.77
SCARNA20.1-201ENST00000516009 ACEP12821 1306 aa10.24□□□□□ -0.77
SCARNA20.1-201ENST00000516009 POLR3AO14802 1390 aaPredicted RBP10.24□□□□□ -0.77
SCARNA20.1-201ENST00000516009 INSRP06213 1382 aa10.24□□□□□ -0.77
SCARNA20.1-201ENST00000516009 WDR43Q15061 677 aaKnown RBP eCLIP10.23□□□□□ -0.77
SCARNA20.1-201ENST00000516009 RBM33Q96EV2 1170 aaKnown RBP10.23□□□□□ -0.77
SCARNA20.1-201ENST00000516009 MAP2P11137 1827 aaKnown RBP10.23□□□□□ -0.77
SCARNA20.1-201ENST00000516009 USP6P35125 1406 aa10.23□□□□□ -0.77
SCARNA20.1-201ENST00000516009 SHPRHQ149N8 1683 aa10.22□□□□□ -0.77
SCARNA20.1-201ENST00000516009 NGDNQ8NEJ9 315 aaKnown RBP10.22□□□□□ -0.77
SCARNA20.1-201ENST00000516009 CFAP53Q96M91 514 aa10.22□□□□□ -0.77
SCARNA20.1-201ENST00000516009 ZBED9Q6R2W3 1325 aa10.22□□□□□ -0.77
SCARNA20.1-201ENST00000516009 MTHFSP49914 203 aa10.21□□□□□ -0.77
SCARNA20.1-201ENST00000516009 PMFBP1Q8TBY8 1022 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms