RNA–Protein interactions for RNA: ENST00000515885.5

LINC00461-216, long intergenic non-protein coding RNA 461, humanhuman

TSL 5

Gene LINC00461, Length 719 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-216ENST00000515885 USP17L8P0C7I0 530 aa12.16□□□□□ -0.46
LINC00461-216ENST00000515885 TSPOAP1O95153 1857 aa12.15□□□□□ -0.46
LINC00461-216ENST00000515885 ADAMTS19Q8TE59 1207 aa12.15□□□□□ -0.46
LINC00461-216ENST00000515885 KDM6BO15054 1643 aa12.15□□□□□ -0.47
LINC00461-216ENST00000515885 ABCA5Q8WWZ7 1642 aa12.15□□□□□ -0.47
LINC00461-216ENST00000515885 DDX11L8A8MPP1 907 aa12.14□□□□□ -0.47
LINC00461-216ENST00000515885 C3orf80F5H4A9 247 aa12.14□□□□□ -0.47
LINC00461-216ENST00000515885 GJA5P36382 358 aa12.14□□□□□ -0.47
LINC00461-216ENST00000515885 GJD4Q96KN9 370 aaPredicted RBP12.14□□□□□ -0.47
LINC00461-216ENST00000515885 GABBR2O75899 941 aa12.13□□□□□ -0.47
LINC00461-216ENST00000515885 C7P10643 843 aa12.13□□□□□ -0.47
LINC00461-216ENST00000515885 SULF1Q8IWU6 871 aa12.13□□□□□ -0.47
LINC00461-216ENST00000515885 CABLES1Q8TDN4 633 aa12.13□□□□□ -0.47
LINC00461-216ENST00000515885 PBXIP1Q96AQ6 731 aa12.13□□□□□ -0.47
LINC00461-216ENST00000515885 PDE4CQ08493 712 aa12.12□□□□□ -0.47
LINC00461-216ENST00000515885 ABCA10Q8WWZ4 1543 aa12.11□□□□□ -0.47
LINC00461-216ENST00000515885 SHROOM2Q13796 1616 aa12.11□□□□□ -0.47
LINC00461-216ENST00000515885 HDGFL1Q5TGJ6 251 aa12.11□□□□□ -0.47
LINC00461-216ENST00000515885 DCBLD2Q96PD2 775 aa12.11□□□□□ -0.47
LINC00461-216ENST00000515885 METRNQ9UJH8 293 aa12.11□□□□□ -0.47
LINC00461-216ENST00000515885 ABCC10Q5T3U5 1492 aa12.1□□□□□ -0.47
LINC00461-216ENST00000515885 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.1□□□□□ -0.47
LINC00461-216ENST00000515885 NUDT7P0C024 238 aa12.1□□□□□ -0.47
LINC00461-216ENST00000515885 COL9A1P20849 921 aa12.1□□□□□ -0.47
LINC00461-216ENST00000515885 FOXD4L5Q5VV16 416 aaPredicted RBP12.1□□□□□ -0.47
LINC00461-216ENST00000515885 FOXD4L4Q8WXT5 416 aaPredicted RBP12.1□□□□□ -0.47
LINC00461-216ENST00000515885 KHSRPQ92945 711 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC00461-216ENST00000515885 TSKSQ9UJT2 592 aa12.1□□□□□ -0.47
LINC00461-216ENST00000515885 NUP160Q12769 1436 aa12.1□□□□□ -0.47
LINC00461-216ENST00000515885 ADAMTS12P58397 1594 aa12.09□□□□□ -0.47
LINC00461-216ENST00000515885 NUTM2BA6NNL0 878 aaPredicted RBP12.09□□□□□ -0.47
LINC00461-216ENST00000515885 NUTM2EB1AL46 878 aaPredicted RBP12.09□□□□□ -0.47
LINC00461-216ENST00000515885 SRPK2P78362 688 aaKnown RBP12.09□□□□□ -0.47
LINC00461-216ENST00000515885 CFAP70Q5T0N1 1121 aa12.09□□□□□ -0.47
LINC00461-216ENST00000515885 NUTM2DQ5VT03 806 aaPredicted RBP12.09□□□□□ -0.47
LINC00461-216ENST00000515885 NUTM2AQ8IVF1 878 aaPredicted RBP12.09□□□□□ -0.47
LINC00461-216ENST00000515885 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.09□□□□□ -0.47
LINC00461-216ENST00000515885 NDUFB9Q9Y6M9 179 aa12.09□□□□□ -0.47
LINC00461-216ENST00000515885 PRG4Q92954 1404 aaPredicted RBP12.09□□□□□ -0.47
LINC00461-216ENST00000515885 GPR37L1O60883 481 aa12.08□□□□□ -0.48
LINC00461-216ENST00000515885 RFX1P22670 979 aa12.08□□□□□ -0.48
LINC00461-216ENST00000515885 DNAJB2P25686 324 aa12.08□□□□□ -0.48
LINC00461-216ENST00000515885 PRPF38BQ5VTL8 546 aaKnown RBP12.08□□□□□ -0.48
LINC00461-216ENST00000515885 NUDT18Q6ZVK8 323 aa12.08□□□□□ -0.48
LINC00461-216ENST00000515885 TMEM134Q9H6X4 195 aa12.07□□□□□ -0.48
LINC00461-216ENST00000515885 DIP2BQ9P265 1576 aa12.07□□□□□ -0.48
LINC00461-216ENST00000515885 HMX1Q9NP08 348 aaPredicted RBP12.06□□□□□ -0.48
LINC00461-216ENST00000515885 USTQ9Y2C2 406 aa12.06□□□□□ -0.48
LINC00461-216ENST00000515885 ZNF428Q96B54 188 aa12.05□□□□□ -0.48
LINC00461-216ENST00000515885 FHAD1B1AJZ9 1412 aa12.04□□□□□ -0.48
LINC00461-216ENST00000515885 BRD1O95696 1058 aa12.04□□□□□ -0.48
LINC00461-216ENST00000515885 KCNA1Q09470 495 aa12.04□□□□□ -0.48
LINC00461-216ENST00000515885 ARSIQ5FYB1 569 aa12.04□□□□□ -0.48
LINC00461-216ENST00000515885 TRIM34Q9BYJ4 488 aa12.04□□□□□ -0.48
LINC00461-216ENST00000515885 ZBTB3Q9H5J0 574 aa12.04□□□□□ -0.48
LINC00461-216ENST00000515885 MAPKBP1O60336 1514 aa12.04□□□□□ -0.48
LINC00461-216ENST00000515885 CARNS1A5YM72 827 aa12.03□□□□□ -0.48
LINC00461-216ENST00000515885 PATL2C9JE40 543 aaKnown RBP12.03□□□□□ -0.48
LINC00461-216ENST00000515885 KDM4AO75164 1064 aa12.03□□□□□ -0.48
LINC00461-216ENST00000515885 WASHC4Q2M389 1173 aa12.03□□□□□ -0.48
LINC00461-216ENST00000515885 PPP1R12CQ9BZL4 782 aa12.03□□□□□ -0.48
LINC00461-216ENST00000515885 PNMA3Q9UL41 463 aa12.03□□□□□ -0.48
LINC00461-216ENST00000515885 CTDSPL2Q05D32 466 aa12.02□□□□□ -0.49
LINC00461-216ENST00000515885 TATDN2Q93075 761 aa12.02□□□□□ -0.49
LINC00461-216ENST00000515885 CSB-PGBD3P0DP91 1061 aa12.01□□□□□ -0.49
LINC00461-216ENST00000515885 VAC14Q08AM6 782 aa12.01□□□□□ -0.49
LINC00461-216ENST00000515885 RDH13Q8NBN7 331 aa12.01□□□□□ -0.49
LINC00461-216ENST00000515885 WRNQ14191 1432 aaPredicted RBP eCLIP12.01□□□□□ -0.49
LINC00461-216ENST00000515885 NBPF26B4DH59 902 aa12□□□□□ -0.49
LINC00461-216ENST00000515885 HOXA2O43364 376 aa12□□□□□ -0.49
LINC00461-216ENST00000515885 PCDHGC3Q9UN70 934 aa12□□□□□ -0.49
LINC00461-216ENST00000515885 ADCY10Q96PN6 1610 aa12□□□□□ -0.49
LINC00461-216ENST00000515885 FDX1P10109 184 aa11.99□□□□□ -0.49
LINC00461-216ENST00000515885 RBM25P49756 843 aaKnown RBP11.99□□□□□ -0.49
LINC00461-216ENST00000515885 ALG2Q9H553 416 aa11.99□□□□□ -0.49
LINC00461-216ENST00000515885 BCL2L12Q9HB09 334 aa11.99□□□□□ -0.49
LINC00461-216ENST00000515885 ADGRL1O94910 1474 aa11.99□□□□□ -0.49
LINC00461-216ENST00000515885 HECW2Q9P2P5 1572 aa11.98□□□□□ -0.49
LINC00461-216ENST00000515885 PPP1R3GB7ZBB8 358 aa11.98□□□□□ -0.49
LINC00461-216ENST00000515885 PALM3A6NDB9 673 aaPredicted RBP11.97□□□□□ -0.49
LINC00461-216ENST00000515885 TRIM6-TRIM34B2RNG4 842 aa11.97□□□□□ -0.49
LINC00461-216ENST00000515885 HOXB3P14651 431 aaPredicted RBP11.97□□□□□ -0.49
LINC00461-216ENST00000515885 GCGRP47871 477 aa11.97□□□□□ -0.49
LINC00461-216ENST00000515885 GUCA2AQ02747 115 aa11.97□□□□□ -0.49
LINC00461-216ENST00000515885 GPR153Q6NV75 609 aa11.97□□□□□ -0.49
LINC00461-216ENST00000515885 HLA-CQ95604 372 aa11.97□□□□□ -0.49
LINC00461-216ENST00000515885 LHX6Q9UPM6 363 aa11.97□□□□□ -0.49
LINC00461-216ENST00000515885 ERICH3Q5RHP9 1530 aa11.96□□□□□ -0.49
LINC00461-216ENST00000515885 SMAPO00193 183 aa11.96□□□□□ -0.49
LINC00461-216ENST00000515885 USP46P62068 366 aa11.96□□□□□ -0.49
LINC00461-216ENST00000515885 LRRN4Q8WUT4 740 aa11.96□□□□□ -0.49
LINC00461-216ENST00000515885 UCN2Q96RP3 112 aa11.96□□□□□ -0.49
LINC00461-216ENST00000515885 POTEIP0CG38 1075 aa11.95□□□□□ -0.5
LINC00461-216ENST00000515885 TTBK1Q5TCY1 1321 aaPredicted RBP11.94□□□□□ -0.5
LINC00461-216ENST00000515885 LMOD1P29536 600 aaPredicted RBP11.94□□□□□ -0.5
LINC00461-216ENST00000515885 PPP4R3BQ5MIZ7 849 aa11.94□□□□□ -0.5
LINC00461-216ENST00000515885 RUSC2Q8N2Y8 1516 aa11.93□□□□□ -0.5
LINC00461-216ENST00000515885 DOK7Q18PE1 504 aa11.93□□□□□ -0.5
LINC00461-216ENST00000515885 PACS2Q86VP3 889 aa11.93□□□□□ -0.5
LINC00461-216ENST00000515885 EPS8L1Q8TE68 723 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms