RNA–Protein interactions for RNA: ENST00000515877.5

GPN1-210, Transcript of GPN-loop GTPase 1, humanhuman

TSL 5 BASIC

Gene GPN1, Length 1,646 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-210ENST00000515877 SYNMO15061 1565 aa11.77□□□□□ -0.53
GPN1-210ENST00000515877 PODXL2Q9NZ53 605 aa11.77□□□□□ -0.53
GPN1-210ENST00000515877 ST20-MTHFSA0A0A6YYL1 179 aa11.76□□□□□ -0.53
GPN1-210ENST00000515877 CHRM1P11229 460 aaPredicted RBP11.76□□□□□ -0.53
GPN1-210ENST00000515877 NRXN1Q9ULB1 1477 aa11.76□□□□□ -0.53
GPN1-210ENST00000515877 RPGRIP1LQ68CZ1 1315 aa11.76□□□□□ -0.53
GPN1-210ENST00000515877 NBPF1Q3BBV0 1214 aa11.75□□□□□ -0.53
GPN1-210ENST00000515877 DSG3P32926 999 aa11.75□□□□□ -0.53
GPN1-210ENST00000515877 CLTCQ00610 1675 aaKnown RBP11.74□□□□□ -0.53
GPN1-210ENST00000515877 SCAF11Q99590 1463 aaKnown RBP11.74□□□□□ -0.53
GPN1-210ENST00000515877 SETBP1Q9Y6X0 1596 aa11.74□□□□□ -0.53
GPN1-210ENST00000515877 COL17A1Q9UMD9 1497 aaPredicted RBP11.73□□□□□ -0.53
GPN1-210ENST00000515877 ZC3H15Q8WU90 426 aaKnown RBP11.73□□□□□ -0.53
GPN1-210ENST00000515877 EIF3AQ14152 1382 aaKnown RBP11.73□□□□□ -0.53
GPN1-210ENST00000515877 SLC52A1Q9NWF4 448 aa11.72□□□□□ -0.53
GPN1-210ENST00000515877 MYO5BQ9ULV0 1848 aa11.71□□□□□ -0.53
GPN1-210ENST00000515877 MYO3AQ8NEV4 1616 aa11.7□□□□□ -0.54
GPN1-210ENST00000515877 ERVK-7P63135 1459 aa11.7□□□□□ -0.54
GPN1-210ENST00000515877 TMF1P82094 1093 aa11.7□□□□□ -0.54
GPN1-210ENST00000515877 CADPS2Q86UW7 1296 aa11.7□□□□□ -0.54
GPN1-210ENST00000515877 PRKRIP1Q9H875 184 aaPredicted RBP11.7□□□□□ -0.54
GPN1-210ENST00000515877 TMEM131LA2VDJ0 1609 aa11.7□□□□□ -0.54
GPN1-210ENST00000515877 NEXMIFQ5QGS0 1516 aa11.7□□□□□ -0.54
GPN1-210ENST00000515877 TESK2Q96S53 571 aa11.69□□□□□ -0.54
GPN1-210ENST00000515877 POLR3GLQ9BT43 218 aa11.69□□□□□ -0.54
GPN1-210ENST00000515877 PIK3C2GO75747 1445 aa11.69□□□□□ -0.54
GPN1-210ENST00000515877 SPATA31D1Q6ZQQ2 1576 aa11.69□□□□□ -0.54
GPN1-210ENST00000515877 SLC24A3Q9HC58 644 aa11.68□□□□□ -0.54
GPN1-210ENST00000515877 ZFYVE9O95405 1425 aa11.68□□□□□ -0.54
GPN1-210ENST00000515877 ADGRF5Q8IZF2 1346 aa11.68□□□□□ -0.54
GPN1-210ENST00000515877 KTN1Q86UP2 1357 aaKnown RBP11.68□□□□□ -0.54
GPN1-210ENST00000515877 CDCA8Q53HL2 280 aa11.68□□□□□ -0.54
GPN1-210ENST00000515877 KDM5AP29375 1690 aaKnown RBP11.67□□□□□ -0.54
GPN1-210ENST00000515877 DISP3Q9P2K9 1392 aa11.66□□□□□ -0.54
GPN1-210ENST00000515877 IDI1Q13907 227 aa11.65□□□□□ -0.54
GPN1-210ENST00000515877 CFAP70Q5T0N1 1121 aa11.65□□□□□ -0.54
GPN1-210ENST00000515877 ARHGEF1Q92888 912 aaKnown RBP11.64□□□□□ -0.55
GPN1-210ENST00000515877 C14orf93Q9H972 538 aaKnown RBP11.64□□□□□ -0.55
GPN1-210ENST00000515877 SBNO2Q9Y2G9 1366 aa11.64□□□□□ -0.55
GPN1-210ENST00000515877 ADGRB1O14514 1584 aa11.64□□□□□ -0.55
GPN1-210ENST00000515877 ESF1Q9H501 851 aaKnown RBP11.64□□□□□ -0.55
GPN1-210ENST00000515877 QRICH2Q9H0J4 1663 aa11.63□□□□□ -0.55
GPN1-210ENST00000515877 MYOM1P52179 1685 aa11.62□□□□□ -0.55
GPN1-210ENST00000515877 RALBP1Q15311 655 aa11.61□□□□□ -0.55
GPN1-210ENST00000515877 ARHGEF28Q8N1W1 1705 aaKnown RBP11.61□□□□□ -0.55
GPN1-210ENST00000515877 FBXO31Q5XUX0 539 aaPredicted RBP11.6□□□□□ -0.55
GPN1-210ENST00000515877 ZMYM3Q14202 1370 aa11.6□□□□□ -0.55
GPN1-210ENST00000515877 PYGBP11216 843 aa11.6□□□□□ -0.55
GPN1-210ENST00000515877 MLECQ14165 292 aa11.6□□□□□ -0.55
GPN1-210ENST00000515877 MRS2Q9HD23 443 aa11.6□□□□□ -0.55
GPN1-210ENST00000515877 RASEFQ8IZ41 740 aa11.59□□□□□ -0.55
GPN1-210ENST00000515877 CENPJQ9HC77 1338 aaPredicted RBP11.58□□□□□ -0.56
GPN1-210ENST00000515877 A2ML1A8K2U0 1454 aa11.58□□□□□ -0.56
GPN1-210ENST00000515877 FER1L4A9Z1Z3 1794 aa11.58□□□□□ -0.56
GPN1-210ENST00000515877 TESPA1A2RU30 521 aaPredicted RBP11.57□□□□□ -0.56
GPN1-210ENST00000515877 PER1O15534 1290 aaPredicted RBP11.57□□□□□ -0.56
GPN1-210ENST00000515877 MYBBP1AQ9BQG0 1328 aaKnown RBP11.57□□□□□ -0.56
GPN1-210ENST00000515877 BRD4O60885 1362 aaPredicted RBP11.56□□□□□ -0.56
GPN1-210ENST00000515877 PARD3Q8TEW0 1356 aa11.56□□□□□ -0.56
GPN1-210ENST00000515877 PANK3Q9H999 370 aa11.56□□□□□ -0.56
GPN1-210ENST00000515877 ALKQ9UM73 1620 aa11.56□□□□□ -0.56
GPN1-210ENST00000515877 UBR1Q8IWV7 1749 aa11.55□□□□□ -0.56
GPN1-210ENST00000515877 SEMA3EO15041 775 aa11.55□□□□□ -0.56
GPN1-210ENST00000515877 MNX1P50219 401 aaPredicted RBP11.55□□□□□ -0.56
GPN1-210ENST00000515877 E2F4Q16254 413 aa11.55□□□□□ -0.56
GPN1-210ENST00000515877 RIMS2Q9UQ26 1411 aa11.55□□□□□ -0.56
GPN1-210ENST00000515877 SETD1AO15047 1707 aaKnown RBP11.55□□□□□ -0.56
GPN1-210ENST00000515877 TNRQ92752 1358 aa11.55□□□□□ -0.56
GPN1-210ENST00000515877 ASXL1Q8IXJ9 1541 aa11.55□□□□□ -0.56
GPN1-210ENST00000515877 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.54□□□□□ -0.56
GPN1-210ENST00000515877 PUS7Q96PZ0 661 aaKnown RBP11.54□□□□□ -0.56
GPN1-210ENST00000515877 TRAK1Q9UPV9 953 aa11.54□□□□□ -0.56
GPN1-210ENST00000515877 C3P01024 1663 aa11.54□□□□□ -0.56
GPN1-210ENST00000515877 ZMYND10O75800 440 aa11.53□□□□□ -0.56
GPN1-210ENST00000515877 HDGFP51858 240 aaKnown RBP11.53□□□□□ -0.56
GPN1-210ENST00000515877 CCDC184Q52MB2 194 aa11.53□□□□□ -0.56
GPN1-210ENST00000515877 CREBZFQ9NS37 354 aa11.53□□□□□ -0.56
GPN1-210ENST00000515877 NPC1L1Q9UHC9 1359 aa11.53□□□□□ -0.56
GPN1-210ENST00000515877 NLRP1Q9C000 1473 aa11.53□□□□□ -0.56
GPN1-210ENST00000515877 HNRNPUQ00839 825 aaKnown RBP eCLIP11.53□□□□□ -0.56
GPN1-210ENST00000515877 TMEM132EQ6IEE7 984 aa11.53□□□□□ -0.56
GPN1-210ENST00000515877 TMC1Q8TDI8 760 aa11.53□□□□□ -0.56
GPN1-210ENST00000515877 KNSTRNQ9Y448 316 aa11.53□□□□□ -0.56
GPN1-210ENST00000515877 NUTM2DQ5VT03 806 aaPredicted RBP11.52□□□□□ -0.57
GPN1-210ENST00000515877 NLRP13Q86W25 1043 aa11.52□□□□□ -0.57
GPN1-210ENST00000515877 YTHDC2Q9H6S0 1430 aaKnown RBP11.51□□□□□ -0.57
GPN1-210ENST00000515877 DLC1Q96QB1 1528 aa11.51□□□□□ -0.57
GPN1-210ENST00000515877 FAM9BQ8IZU0 186 aa11.51□□□□□ -0.57
GPN1-210ENST00000515877 SPDYE1Q8NFV5 336 aaPredicted RBP11.51□□□□□ -0.57
GPN1-210ENST00000515877 ZMYND15Q9H091 742 aa11.51□□□□□ -0.57
GPN1-210ENST00000515877 RSPH6AQ9H0K4 717 aa11.5□□□□□ -0.57
GPN1-210ENST00000515877 KNDC1Q76NI1 1749 aa11.5□□□□□ -0.57
GPN1-210ENST00000515877 NRXN3Q9Y4C0 1643 aa11.5□□□□□ -0.57
GPN1-210ENST00000515877 EVC2Q86UK5 1308 aa11.5□□□□□ -0.57
GPN1-210ENST00000515877 PTPRMP28827 1452 aa11.5□□□□□ -0.57
GPN1-210ENST00000515877 USP32Q8NFA0 1604 aa11.49□□□□□ -0.57
GPN1-210ENST00000515877 CNGB1Q14028 1251 aaPredicted RBP11.49□□□□□ -0.57
GPN1-210ENST00000515877 SMYD5Q6GMV2 418 aa11.49□□□□□ -0.57
GPN1-210ENST00000515877 PNISRQ8TF01 805 aaKnown RBP11.49□□□□□ -0.57
GPN1-210ENST00000515877 TULP4Q9NRJ4 1543 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms