RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	ST20-MTHFS	A0A0A6YYL1	179 aa		6.25	□□□□□ -1.41
ATP2C1-223	ENST00000515854	CCER2	I3L3R5	266 aa		6.25	□□□□□ -1.41
ATP2C1-223	ENST00000515854	ANP32C	O43423	234 aa		6.25	□□□□□ -1.41
ATP2C1-223	ENST00000515854	POLR1A	O95602	1720 aa	Predicted RBP	6.25	□□□□□ -1.41
ATP2C1-223	ENST00000515854	ARHGEF40	Q8TER5	1519 aa		6.25	□□□□□ -1.41
ATP2C1-223	ENST00000515854	RPGRIP1L	Q68CZ1	1315 aa		6.25	□□□□□ -1.41
ATP2C1-223	ENST00000515854	SYNM	O15061	1565 aa		6.24	□□□□□ -1.41
ATP2C1-223	ENST00000515854	NRXN1	Q9ULB1	1477 aa		6.24	□□□□□ -1.41
ATP2C1-223	ENST00000515854	SLC52A1	Q9NWF4	448 aa		6.24	□□□□□ -1.41
ATP2C1-223	ENST00000515854	SIGLEC1	Q9BZZ2	1709 aa		6.24	□□□□□ -1.41
ATP2C1-223	ENST00000515854	PIK3C2B	O00750	1634 aa		6.24	□□□□□ -1.41
ATP2C1-223	ENST00000515854	KIF1B	O60333	1816 aa		6.23	□□□□□ -1.41
ATP2C1-223	ENST00000515854	IFT172	Q9UG01	1749 aa		6.23	□□□□□ -1.41
ATP2C1-223	ENST00000515854	CENPB	P07199	599 aa	Predicted RBP	6.23	□□□□□ -1.41
ATP2C1-223	ENST00000515854	PLA2G2E	Q9NZK7	142 aa		6.23	□□□□□ -1.41
ATP2C1-223	ENST00000515854	MROH2A	A6NES4	1674 aa		6.23	□□□□□ -1.41
ATP2C1-223	ENST00000515854	ADGRF5	Q8IZF2	1346 aa		6.23	□□□□□ -1.41
ATP2C1-223	ENST00000515854	KIAA1210	Q9ULL0	1709 aa		6.22	□□□□□ -1.41
ATP2C1-223	ENST00000515854	IDI1	Q13907	227 aa		6.22	□□□□□ -1.41
ATP2C1-223	ENST00000515854	TESK2	Q96S53	571 aa		6.22	□□□□□ -1.41
ATP2C1-223	ENST00000515854	ERVK-7	P63135	1459 aa		6.22	□□□□□ -1.41
ATP2C1-223	ENST00000515854	SCAF11	Q99590	1463 aa	Known RBP	6.22	□□□□□ -1.41
ATP2C1-223	ENST00000515854	PREX1	Q8TCU6	1659 aa		6.21	□□□□□ -1.42
ATP2C1-223	ENST00000515854	CHGA	P10645	457 aa	Known RBP	6.21	□□□□□ -1.42
ATP2C1-223	ENST00000515854	YTHDC1	Q96MU7	727 aa	Known RBP	6.21	□□□□□ -1.42
ATP2C1-223	ENST00000515854	TRPC6	Q9Y210	931 aa		6.21	□□□□□ -1.42
ATP2C1-223	ENST00000515854	ZFYVE9	O95405	1425 aa		6.21	□□□□□ -1.42
ATP2C1-223	ENST00000515854	IQGAP1	P46940	1657 aa		6.2	□□□□□ -1.42
ATP2C1-223	ENST00000515854	SPATA31D1	Q6ZQQ2	1576 aa		6.2	□□□□□ -1.42
ATP2C1-223	ENST00000515854	PIK3C2G	O75747	1445 aa		6.2	□□□□□ -1.42
ATP2C1-223	ENST00000515854	TIE1	P35590	1138 aa		6.2	□□□□□ -1.42
ATP2C1-223	ENST00000515854	CFAP70	Q5T0N1	1121 aa		6.2	□□□□□ -1.42
ATP2C1-223	ENST00000515854	IER5L	Q5T953	404 aa		6.2	□□□□□ -1.42
ATP2C1-223	ENST00000515854	FBXO31	Q5XUX0	539 aa	Predicted RBP	6.2	□□□□□ -1.42
ATP2C1-223	ENST00000515854	DNAJC5	Q9H3Z4	198 aa		6.2	□□□□□ -1.42
ATP2C1-223	ENST00000515854	C14orf93	Q9H972	538 aa	Known RBP	6.2	□□□□□ -1.42
ATP2C1-223	ENST00000515854	PPL	O60437	1756 aa		6.2	□□□□□ -1.42
ATP2C1-223	ENST00000515854	NEXMIF	Q5QGS0	1516 aa		6.2	□□□□□ -1.42
ATP2C1-223	ENST00000515854	SETBP1	Q9Y6X0	1596 aa		6.19	□□□□□ -1.42
ATP2C1-223	ENST00000515854	TMEM131L	A2VDJ0	1609 aa		6.19	□□□□□ -1.42
ATP2C1-223	ENST00000515854	VGF	O15240	615 aa	Predicted RBP	6.19	□□□□□ -1.42
ATP2C1-223	ENST00000515854	VASP	P50552	380 aa	Predicted RBP	6.19	□□□□□ -1.42
ATP2C1-223	ENST00000515854	TMF1	P82094	1093 aa		6.19	□□□□□ -1.42
ATP2C1-223	ENST00000515854	MLEC	Q14165	292 aa		6.19	□□□□□ -1.42
ATP2C1-223	ENST00000515854	PRKRIP1	Q9H875	184 aa	Predicted RBP	6.19	□□□□□ -1.42
ATP2C1-223	ENST00000515854	CLTC	Q00610	1675 aa	Known RBP	6.19	□□□□□ -1.42
ATP2C1-223	ENST00000515854	EIF3A	Q14152	1382 aa	Known RBP	6.18	□□□□□ -1.42
ATP2C1-223	ENST00000515854	ZMYM3	Q14202	1370 aa		6.18	□□□□□ -1.42
ATP2C1-223	ENST00000515854	DISP3	Q9P2K9	1392 aa		6.18	□□□□□ -1.42
ATP2C1-223	ENST00000515854	ADGRB1	O14514	1584 aa		6.18	□□□□□ -1.42
ATP2C1-223	ENST00000515854	CDCA8	Q53HL2	280 aa		6.17	□□□□□ -1.42
ATP2C1-223	ENST00000515854	POLR3GL	Q9BT43	218 aa		6.17	□□□□□ -1.42
ATP2C1-223	ENST00000515854	IRX2	Q9BZI1	471 aa	Predicted RBP	6.17	□□□□□ -1.42
ATP2C1-223	ENST00000515854	ESF1	Q9H501	851 aa	Known RBP	6.17	□□□□□ -1.42
ATP2C1-223	ENST00000515854	SBNO2	Q9Y2G9	1366 aa		6.17	□□□□□ -1.42
ATP2C1-223	ENST00000515854	A2ML1	A8K2U0	1454 aa		6.16	□□□□□ -1.42
ATP2C1-223	ENST00000515854	PER1	O15534	1290 aa	Predicted RBP	6.16	□□□□□ -1.42
ATP2C1-223	ENST00000515854	CFAP65	Q6ZU64	1925 aa	Known RBP	6.16	□□□□□ -1.42
ATP2C1-223	ENST00000515854	MYO3A	Q8NEV4	1616 aa		6.16	□□□□□ -1.42
ATP2C1-223	ENST00000515854	KTN1	Q86UP2	1357 aa	Known RBP	6.16	□□□□□ -1.42
ATP2C1-223	ENST00000515854	TTLL13P	A6NNM8	815 aa		6.15	□□□□□ -1.42
ATP2C1-223	ENST00000515854	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	6.15	□□□□□ -1.42
ATP2C1-223	ENST00000515854	TNR	Q92752	1358 aa		6.15	□□□□□ -1.43
ATP2C1-223	ENST00000515854	RALBP1	Q15311	655 aa		6.14	□□□□□ -1.43
ATP2C1-223	ENST00000515854	CCDC184	Q52MB2	194 aa		6.14	□□□□□ -1.43
ATP2C1-223	ENST00000515854	NUTM2D	Q5VT03	806 aa	Predicted RBP	6.14	□□□□□ -1.43
ATP2C1-223	ENST00000515854	TMEM132E	Q6IEE7	984 aa		6.14	□□□□□ -1.43
ATP2C1-223	ENST00000515854	PANK3	Q9H999	370 aa		6.14	□□□□□ -1.43
ATP2C1-223	ENST00000515854	STAG3	Q9UJ98	1225 aa		6.14	□□□□□ -1.43
ATP2C1-223	ENST00000515854	CENPJ	Q9HC77	1338 aa	Predicted RBP	6.14	□□□□□ -1.43
ATP2C1-223	ENST00000515854	RIMS2	Q9UQ26	1411 aa		6.14	□□□□□ -1.43
ATP2C1-223	ENST00000515854	PLCG2	P16885	1265 aa		6.13	□□□□□ -1.43
ATP2C1-223	ENST00000515854	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	6.13	□□□□□ -1.43
ATP2C1-223	ENST00000515854	PUS7	Q96PZ0	661 aa	Known RBP	6.13	□□□□□ -1.43
ATP2C1-223	ENST00000515854	TRIM35	Q9UPQ4	493 aa		6.13	□□□□□ -1.43
ATP2C1-223	ENST00000515854	TRAK1	Q9UPV9	953 aa		6.13	□□□□□ -1.43
ATP2C1-223	ENST00000515854	ASXL1	Q8IXJ9	1541 aa		6.13	□□□□□ -1.43
ATP2C1-223	ENST00000515854	KDM5A	P29375	1690 aa	Known RBP	6.13	□□□□□ -1.43
ATP2C1-223	ENST00000515854	MYO5B	Q9ULV0	1848 aa		6.13	□□□□□ -1.43
ATP2C1-223	ENST00000515854	HDGF	P51858	240 aa	Known RBP	6.12	□□□□□ -1.43
ATP2C1-223	ENST00000515854	IFNLR1	Q8IU57	520 aa	Predicted RBP	6.12	□□□□□ -1.43
ATP2C1-223	ENST00000515854	PARD3	Q8TEW0	1356 aa		6.12	□□□□□ -1.43
ATP2C1-223	ENST00000515854	NLRP1	Q9C000	1473 aa		6.12	□□□□□ -1.43
ATP2C1-223	ENST00000515854	MRS2	Q9HD23	443 aa		6.12	□□□□□ -1.43
ATP2C1-223	ENST00000515854	ALK	Q9UM73	1620 aa		6.12	□□□□□ -1.43
ATP2C1-223	ENST00000515854	YTHDC2	Q9H6S0	1430 aa	Known RBP	6.11	□□□□□ -1.43
ATP2C1-223	ENST00000515854	BRD4	O60885	1362 aa	Predicted RBP	6.11	□□□□□ -1.43
ATP2C1-223	ENST00000515854	NPC1L1	Q9UHC9	1359 aa		6.11	□□□□□ -1.43
ATP2C1-223	ENST00000515854	MYBBP1A	Q9BQG0	1328 aa	Known RBP	6.11	□□□□□ -1.43
ATP2C1-223	ENST00000515854	KIF12	Q96FN5	646 aa		6.11	□□□□□ -1.43
ATP2C1-223	ENST00000515854	ARHGEF28	Q8N1W1	1705 aa	Known RBP	6.11	□□□□□ -1.43
ATP2C1-223	ENST00000515854	MYOM1	P52179	1685 aa		6.1	□□□□□ -1.43
ATP2C1-223	ENST00000515854	QRICH2	Q9H0J4	1663 aa		6.1	□□□□□ -1.43
ATP2C1-223	ENST00000515854	PTPRM	P28827	1452 aa		6.1	□□□□□ -1.43
ATP2C1-223	ENST00000515854	LRPPRC	P42704	1394 aa	Known RBP	6.1	□□□□□ -1.43
ATP2C1-223	ENST00000515854	TMEM2	Q9UHN6	1383 aa		6.1	□□□□□ -1.43
ATP2C1-223	ENST00000515854	PTGER2	P43116	358 aa		6.1	□□□□□ -1.43
ATP2C1-223	ENST00000515854	CEBPA	P49715	358 aa	Predicted RBP	6.1	□□□□□ -1.43
ATP2C1-223	ENST00000515854	PNISR	Q8TF01	805 aa	Known RBP	6.1	□□□□□ -1.43
ATP2C1-223	ENST00000515854	DLC1	Q96QB1	1528 aa		6.09	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms