RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 CEP170BQ9Y4F5 1589 aaPredicted RBP27.33■■□□□ 1.97
TRIO-223ENST00000515710 CC2D1BQ5T0F9 858 aaKnown RBP27.32■■□□□ 1.96
TRIO-223ENST00000515710 AMER1Q5JTC6 1135 aaPredicted RBP27.31■■□□□ 1.96
TRIO-223ENST00000515710 TECPR2O15040 1411 aa27.31■■□□□ 1.96
TRIO-223ENST00000515710 MED14O60244 1454 aa27.3■■□□□ 1.96
TRIO-223ENST00000515710 KNDC1Q76NI1 1749 aa27.3■■□□□ 1.96
TRIO-223ENST00000515710 MINK1Q8N4C8 1332 aaPredicted RBP27.3■■□□□ 1.96
TRIO-223ENST00000515710 TMC1Q8TDI8 760 aa27.29■■□□□ 1.96
TRIO-223ENST00000515710 FAM135BQ49AJ0 1406 aa27.29■■□□□ 1.96
TRIO-223ENST00000515710 NLRP13Q86W25 1043 aa27.29■■□□□ 1.96
TRIO-223ENST00000515710 NINLQ9Y2I6 1382 aa27.28■■□□□ 1.96
TRIO-223ENST00000515710 SLC12A5Q9H2X9 1139 aa27.27■■□□□ 1.96
TRIO-223ENST00000515710 CABP2Q9NPB3 220 aa27.27■■□□□ 1.96
TRIO-223ENST00000515710 TBX22Q9Y458 520 aa27.27■■□□□ 1.96
TRIO-223ENST00000515710 ATAD2Q6PL18 1390 aa27.26■■□□□ 1.95
TRIO-223ENST00000515710 SRPK2P78362 688 aaKnown RBP27.26■■□□□ 1.95
TRIO-223ENST00000515710 WAPLQ7Z5K2 1190 aa27.26■■□□□ 1.95
TRIO-223ENST00000515710 FAM9BQ8IZU0 186 aa27.26■■□□□ 1.95
TRIO-223ENST00000515710 CARD14Q9BXL6 1004 aa27.26■■□□□ 1.95
TRIO-223ENST00000515710 CPS1P31327 1500 aa27.25■■□□□ 1.95
TRIO-223ENST00000515710 ZNF142P52746 1687 aaPredicted RBP27.25■■□□□ 1.95
TRIO-223ENST00000515710 SETD1BQ9UPS6 1966 aaKnown RBP27.23■■□□□ 1.95
TRIO-223ENST00000515710 PLEKHH1Q9ULM0 1364 aa27.23■■□□□ 1.95
TRIO-223ENST00000515710 DIP2AQ14689 1571 aa27.23■■□□□ 1.95
TRIO-223ENST00000515710 CDK19Q9BWU1 502 aa27.22■■□□□ 1.95
TRIO-223ENST00000515710 PNISRQ8TF01 805 aaKnown RBP27.22■■□□□ 1.95
TRIO-223ENST00000515710 ANKRD36BQ8N2N9 1353 aa27.21■■□□□ 1.95
TRIO-223ENST00000515710 SLC26A8Q96RN1 970 aa27.2■■□□□ 1.95
TRIO-223ENST00000515710 HNRNPUQ00839 825 aaKnown RBP eCLIP27.19■■□□□ 1.94
TRIO-223ENST00000515710 ANKLE2Q86XL3 938 aa27.18■■□□□ 1.94
TRIO-223ENST00000515710 NSD3Q9BZ95 1437 aa27.17■■□□□ 1.94
TRIO-223ENST00000515710 ROBO2Q9HCK4 1378 aa27.15■■□□□ 1.94
TRIO-223ENST00000515710 WASLO00401 505 aaPredicted RBP27.14■■□□□ 1.94
TRIO-223ENST00000515710 PTPRUQ92729 1446 aa27.14■■□□□ 1.94
TRIO-223ENST00000515710 USP32Q8NFA0 1604 aa27.14■■□□□ 1.93
TRIO-223ENST00000515710 PPP2R1AP30153 589 aa27.14■■□□□ 1.93
TRIO-223ENST00000515710 TERF2IPQ9NYB0 399 aa27.13■■□□□ 1.93
TRIO-223ENST00000515710 PIK3R4Q99570 1358 aa27.13■■□□□ 1.93
TRIO-223ENST00000515710 AMOTL2Q9Y2J4 779 aa27.12■■□□□ 1.93
TRIO-223ENST00000515710 CGNL1Q0VF96 1302 aa27.11■■□□□ 1.93
TRIO-223ENST00000515710 NSD2O96028 1365 aa27.08■■□□□ 1.93
TRIO-223ENST00000515710 HDGFL2Q7Z4V5 671 aaPredicted RBP27.08■■□□□ 1.93
TRIO-223ENST00000515710 PTCH1Q13635 1447 aa27.08■■□□□ 1.93
TRIO-223ENST00000515710 A0A1W2PP64 1363 aa27.08■■□□□ 1.93
TRIO-223ENST00000515710 CABP1Q9NZU7 370 aa27.06■■□□□ 1.92
TRIO-223ENST00000515710 ADGRB2O60241 1585 aa27.06■■□□□ 1.92
TRIO-223ENST00000515710 CD163L1Q9NR16 1453 aa27.05■■□□□ 1.92
TRIO-223ENST00000515710 MORC1Q86VD1 984 aa27.04■■□□□ 1.92
TRIO-223ENST00000515710 INSRP06213 1382 aa27.04■■□□□ 1.92
TRIO-223ENST00000515710 ZBED9Q6R2W3 1325 aa27.04■■□□□ 1.92
TRIO-223ENST00000515710 ATP7BP35670 1465 aa27.03■■□□□ 1.92
TRIO-223ENST00000515710 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.02■■□□□ 1.92
TRIO-223ENST00000515710 NUDT16Q96DE0 195 aaKnown RBP27.02■■□□□ 1.92
TRIO-223ENST00000515710 XRN1Q8IZH2 1706 aaKnown RBP27.01■■□□□ 1.91
TRIO-223ENST00000515710 GTF3C3Q9Y5Q9 886 aa27.01■■□□□ 1.91
TRIO-223ENST00000515710 CCDC61Q9Y6R9 512 aa27■■□□□ 1.91
TRIO-223ENST00000515710 NPHP4O75161 1426 aaPredicted RBP26.98■■□□□ 1.91
TRIO-223ENST00000515710 PPIP5K1Q6PFW1 1433 aa26.98■■□□□ 1.91
TRIO-223ENST00000515710 CPSF1Q10570 1443 aaKnown RBP26.95■■□□□ 1.91
TRIO-223ENST00000515710 KCNA6P17658 529 aa26.95■■□□□ 1.9
TRIO-223ENST00000515710 POLR3AO14802 1390 aaPredicted RBP26.93■■□□□ 1.9
TRIO-223ENST00000515710 PRR36Q9H6K5 1346 aa26.92■■□□□ 1.9
TRIO-223ENST00000515710 FYB1O15117 783 aa26.92■■□□□ 1.9
TRIO-223ENST00000515710 WDR43Q15061 677 aaKnown RBP eCLIP26.92■■□□□ 1.9
TRIO-223ENST00000515710 ZNF692Q9BU19 519 aaPredicted RBP26.92■■□□□ 1.9
TRIO-223ENST00000515710 CHD2O14647 1828 aaKnown RBP26.92■■□□□ 1.9
TRIO-223ENST00000515710 CDC42BPGQ6DT37 1551 aa26.91■■□□□ 1.9
TRIO-223ENST00000515710 NCKAP5LQ9HCH0 1330 aa26.89■■□□□ 1.9
TRIO-223ENST00000515710 BLMP54132 1417 aaPredicted RBP26.89■■□□□ 1.89
TRIO-223ENST00000515710 EDC4Q6P2E9 1401 aaKnown RBP26.89■■□□□ 1.89
TRIO-223ENST00000515710 PLEKHG3A1L390 1219 aa26.88■■□□□ 1.89
TRIO-223ENST00000515710 GGNBP2Q9H3C7 697 aa26.88■■□□□ 1.89
TRIO-223ENST00000515710 ADAMTS8Q9UP79 889 aa26.87■■□□□ 1.89
TRIO-223ENST00000515710 ANKRD26Q9UPS8 1709 aa26.87■■□□□ 1.89
TRIO-223ENST00000515710 TNNT2P45379 298 aaPredicted RBP26.86■■□□□ 1.89
TRIO-223ENST00000515710 TOPAZ1Q8N9V7 1692 aa26.85■■□□□ 1.89
TRIO-223ENST00000515710 KIF20BQ96Q89 1820 aa26.83■■□□□ 1.89
TRIO-223ENST00000515710 CFAP53Q96M91 514 aa26.83■■□□□ 1.89
TRIO-223ENST00000515710 KDM4FA0A1W2PPD8 638 aa26.82■■□□□ 1.88
TRIO-223ENST00000515710 MTHFSP49914 203 aa26.82■■□□□ 1.88
TRIO-223ENST00000515710 AKAP12Q02952 1782 aa26.82■■□□□ 1.88
TRIO-223ENST00000515710 MON2Q7Z3U7 1717 aa26.82■■□□□ 1.88
TRIO-223ENST00000515710 ANKARQ7Z5J8 1434 aa26.82■■□□□ 1.88
TRIO-223ENST00000515710 ITSN1Q15811 1721 aa26.81■■□□□ 1.88
TRIO-223ENST00000515710 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.81■■□□□ 1.88
TRIO-223ENST00000515710 ACEP12821 1306 aa26.79■■□□□ 1.88
TRIO-223ENST00000515710 NUTM2FA1L443 756 aa26.78■■□□□ 1.88
TRIO-223ENST00000515710 NWD1Q149M9 1564 aa26.77■■□□□ 1.88
TRIO-223ENST00000515710 PDE3BQ13370 1112 aa26.75■■□□□ 1.87
TRIO-223ENST00000515710 FMN2Q9NZ56 1722 aa26.74■■□□□ 1.87
TRIO-223ENST00000515710 NKTRP30414 1462 aaKnown RBP26.74■■□□□ 1.87
TRIO-223ENST00000515710 SMG6Q86US8 1419 aaKnown RBP26.74■■□□□ 1.87
TRIO-223ENST00000515710 USP6P35125 1406 aa26.73■■□□□ 1.87
TRIO-223ENST00000515710 NME9Q86XW9 330 aa26.73■■□□□ 1.87
TRIO-223ENST00000515710 TTC21BQ7Z4L5 1316 aa26.72■■□□□ 1.87
TRIO-223ENST00000515710 ADGRL3Q9HAR2 1447 aa26.72■■□□□ 1.87
TRIO-223ENST00000515710 COG3Q96JB2 828 aa26.71■■□□□ 1.87
TRIO-223ENST00000515710 NUDCQ9Y266 331 aa26.71■■□□□ 1.87
TRIO-223ENST00000515710 NALCNQ8IZF0 1738 aa26.71■■□□□ 1.87
TRIO-223ENST00000515710 SHPRHQ149N8 1683 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms