RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 A0A0G2JS52 829 aa21.4■■□□□ 1.02
SMAD1-216ENST00000515527 MYT1Q01538 1121 aa21.4■■□□□ 1.02
SMAD1-216ENST00000515527 ORAI2Q96SN7 254 aa21.4■■□□□ 1.02
SMAD1-216ENST00000515527 XRN1Q8IZH2 1706 aaKnown RBP21.4■■□□□ 1.02
SMAD1-216ENST00000515527 CCDC9Q9Y3X0 531 aaKnown RBP21.39■■□□□ 1.01
SMAD1-216ENST00000515527 NALCNQ8IZF0 1738 aa21.38■■□□□ 1.01
SMAD1-216ENST00000515527 RRP7BPQ9NSQ0 103 aa21.38■■□□□ 1.01
SMAD1-216ENST00000515527 SLIT2O94813 1529 aa21.38■■□□□ 1.01
SMAD1-216ENST00000515527 EZH2Q15910 746 aaKnown RBP21.37■■□□□ 1.01
SMAD1-216ENST00000515527 ONECUT3O60422 494 aaPredicted RBP21.34■■□□□ 1.01
SMAD1-216ENST00000515527 SPON1Q9HCB6 807 aa21.34■■□□□ 1.01
SMAD1-216ENST00000515527 VPS72Q15906 364 aa21.32■■□□□ 1
SMAD1-216ENST00000515527 DISP2A7MBM2 1401 aa21.3■■□□□ 1
SMAD1-216ENST00000515527 CHD4Q14839 1912 aa21.29■■□□□ 1
SMAD1-216ENST00000515527 NPHP3Q7Z494 1330 aa21.28■■□□□ 1
SMAD1-216ENST00000515527 TNS1Q9HBL0 1735 aaKnown RBP21.27■■□□□ 1
SMAD1-216ENST00000515527 KCNQ2O43526 872 aa21.27■■□□□ 1
SMAD1-216ENST00000515527 FAM182BQ5T319 152 aa21.27■■□□□ 1
SMAD1-216ENST00000515527 UTRNP46939 3433 aa21.27■■□□□ 1
SMAD1-216ENST00000515527 GIGYF1O75420 1035 aaPredicted RBP21.26■□□□□ 0.99
SMAD1-216ENST00000515527 XPCQ01831 940 aaPredicted RBP21.26■□□□□ 0.99
SMAD1-216ENST00000515527 CAMKK2Q96RR4 588 aa21.25■□□□□ 0.99
SMAD1-216ENST00000515527 PTPN23Q9H3S7 1636 aa21.25■□□□□ 0.99
SMAD1-216ENST00000515527 NBPF8Q3BBV2 869 aa21.23■□□□□ 0.99
SMAD1-216ENST00000515527 NBPF14Q5TI25 921 aa21.23■□□□□ 0.99
SMAD1-216ENST00000515527 ADGRB2O60241 1585 aa21.23■□□□□ 0.99
SMAD1-216ENST00000515527 METP08581 1390 aa21.23■□□□□ 0.99
SMAD1-216ENST00000515527 MYOM3Q5VTT5 1437 aa21.22■□□□□ 0.99
SMAD1-216ENST00000515527 PXDNQ92626 1479 aa21.22■□□□□ 0.99
SMAD1-216ENST00000515527 FAM98CQ17RN3 349 aaKnown RBP21.22■□□□□ 0.99
SMAD1-216ENST00000515527 HAP1P54257 671 aaPredicted RBP21.21■□□□□ 0.99
SMAD1-216ENST00000515527 USP32Q8NFA0 1604 aa21.21■□□□□ 0.99
SMAD1-216ENST00000515527 NRXN3Q9Y4C0 1643 aa21.21■□□□□ 0.99
SMAD1-216ENST00000515527 ESCO1Q5FWF5 840 aa21.2■□□□□ 0.98
SMAD1-216ENST00000515527 PLCH1Q4KWH8 1693 aa21.19■□□□□ 0.98
SMAD1-216ENST00000515527 NWD2Q9ULI1 1742 aa21.18■□□□□ 0.98
SMAD1-216ENST00000515527 FOXO3O43524 673 aa21.18■□□□□ 0.98
SMAD1-216ENST00000515527 PARD3Q8TEW0 1356 aa21.18■□□□□ 0.98
SMAD1-216ENST00000515527 ADGRL2O95490 1459 aa21.17■□□□□ 0.98
SMAD1-216ENST00000515527 CROCC2H7BZ55 1655 aa21.17■□□□□ 0.98
SMAD1-216ENST00000515527 TRIM37O94972 964 aa21.16■□□□□ 0.98
SMAD1-216ENST00000515527 APBA3O96018 575 aa21.16■□□□□ 0.98
SMAD1-216ENST00000515527 NUP188Q5SRE5 1749 aa21.15■□□□□ 0.98
SMAD1-216ENST00000515527 RREB1Q92766 1687 aa21.15■□□□□ 0.98
SMAD1-216ENST00000515527 LRPPRCP42704 1394 aaKnown RBP21.11■□□□□ 0.97
SMAD1-216ENST00000515527 PLEKHG5O94827 1062 aa21.11■□□□□ 0.97
SMAD1-216ENST00000515527 ABCC5O15440 1437 aa21.11■□□□□ 0.97
SMAD1-216ENST00000515527 NRKQ7Z2Y5 1582 aa21.1■□□□□ 0.97
SMAD1-216ENST00000515527 SPATA31A3Q5VYP0 1347 aa21.07■□□□□ 0.96
SMAD1-216ENST00000515527 CHIC2Q9UKJ5 165 aa21.07■□□□□ 0.96
SMAD1-216ENST00000515527 CABLES1Q8TDN4 633 aa21.06■□□□□ 0.96
SMAD1-216ENST00000515527 ANKRD30AQ9BXX3 1397 aa21.06■□□□□ 0.96
SMAD1-216ENST00000515527 FAM196AQ6ZSG2 479 aa21.05■□□□□ 0.96
SMAD1-216ENST00000515527 ROBO2Q9HCK4 1378 aa21.03■□□□□ 0.96
SMAD1-216ENST00000515527 MYOM1P52179 1685 aa21.02■□□□□ 0.96
SMAD1-216ENST00000515527 CAPN15O75808 1086 aa21.02■□□□□ 0.96
SMAD1-216ENST00000515527 IQGAP3Q86VI3 1631 aa21.02■□□□□ 0.96
SMAD1-216ENST00000515527 FAM83GA6ND36 823 aa21.01■□□□□ 0.95
SMAD1-216ENST00000515527 ZNF326Q5BKZ1 582 aaKnown RBP21.01■□□□□ 0.95
SMAD1-216ENST00000515527 DAPK1P53355 1430 aa21.01■□□□□ 0.95
SMAD1-216ENST00000515527 SYT17Q9BSW7 474 aa21■□□□□ 0.95
SMAD1-216ENST00000515527 NRAPQ86VF7 1730 aa21■□□□□ 0.95
SMAD1-216ENST00000515527 NUTM2FA1L443 756 aa20.99■□□□□ 0.95
SMAD1-216ENST00000515527 FHDC1Q9C0D6 1143 aaPredicted RBP20.99■□□□□ 0.95
SMAD1-216ENST00000515527 BTG4Q9NY30 223 aa20.98■□□□□ 0.95
SMAD1-216ENST00000515527 THSD7AQ9UPZ6 1657 aa20.98■□□□□ 0.95
SMAD1-216ENST00000515527 E9PCH4 1651 aa20.97■□□□□ 0.95
SMAD1-216ENST00000515527 CCDC144AA2RUR9 1427 aa20.96■□□□□ 0.95
SMAD1-216ENST00000515527 ZBTB7AO95365 584 aa20.96■□□□□ 0.95
SMAD1-216ENST00000515527 KRT28Q7Z3Y7 464 aa20.96■□□□□ 0.95
SMAD1-216ENST00000515527 CDC42BPGQ6DT37 1551 aa20.96■□□□□ 0.95
SMAD1-216ENST00000515527 LMOD2Q6P5Q4 547 aa20.95■□□□□ 0.94
SMAD1-216ENST00000515527 SPATA31A5Q5VU36 1347 aa20.95■□□□□ 0.94
SMAD1-216ENST00000515527 SPATA31A7Q8IWB4 1347 aa20.95■□□□□ 0.94
SMAD1-216ENST00000515527 ABCA3Q99758 1704 aa20.95■□□□□ 0.94
SMAD1-216ENST00000515527 CASZ1Q86V15 1759 aa20.94■□□□□ 0.94
SMAD1-216ENST00000515527 HFM1A2PYH4 1435 aa20.94■□□□□ 0.94
SMAD1-216ENST00000515527 ATF5Q9Y2D1 282 aaPredicted RBP20.93■□□□□ 0.94
SMAD1-216ENST00000515527 TNS3Q68CZ2 1445 aa20.93■□□□□ 0.94
SMAD1-216ENST00000515527 HSPA6P17066 643 aa20.92■□□□□ 0.94
SMAD1-216ENST00000515527 PTGER2P43116 358 aa20.92■□□□□ 0.94
SMAD1-216ENST00000515527 DLC1Q96QB1 1528 aa20.92■□□□□ 0.94
SMAD1-216ENST00000515527 SLC34A2O95436 690 aa20.91■□□□□ 0.94
SMAD1-216ENST00000515527 GPR162Q16538 588 aa20.9■□□□□ 0.94
SMAD1-216ENST00000515527 PDGFDQ9GZP0 370 aaPredicted RBP20.9■□□□□ 0.94
SMAD1-216ENST00000515527 NEXMIFQ5QGS0 1516 aa20.89■□□□□ 0.94
SMAD1-216ENST00000515527 SHANK3Q9BYB0 1731 aa20.89■□□□□ 0.93
SMAD1-216ENST00000515527 KIF1AQ12756 1690 aa20.88■□□□□ 0.93
SMAD1-216ENST00000515527 ANKRD50Q9ULJ7 1429 aa20.87■□□□□ 0.93
SMAD1-216ENST00000515527 PSME1Q06323 249 aa20.87■□□□□ 0.93
SMAD1-216ENST00000515527 ANO8Q9HCE9 1232 aaPredicted RBP20.86■□□□□ 0.93
SMAD1-216ENST00000515527 COL14A1Q05707 1796 aaKnown RBP20.86■□□□□ 0.93
SMAD1-216ENST00000515527 PDE3BQ13370 1112 aa20.85■□□□□ 0.93
SMAD1-216ENST00000515527 NAIPQ13075 1403 aa20.84■□□□□ 0.93
SMAD1-216ENST00000515527 ARHGEF10O15013 1369 aa20.84■□□□□ 0.93
SMAD1-216ENST00000515527 PRAG1Q86YV5 1406 aa20.83■□□□□ 0.93
SMAD1-216ENST00000515527 KANK4Q5T7N3 995 aaPredicted RBP20.82■□□□□ 0.92
SMAD1-216ENST00000515527 RRBP1Q9P2E9 1410 aaKnown RBP20.8■□□□□ 0.92
SMAD1-216ENST00000515527 PRELPP51888 382 aa20.8■□□□□ 0.92
SMAD1-216ENST00000515527 PELP1Q8IZL8 1130 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms