RNA–Protein interactions for RNA: ENST00000515442.1

RUFY3-214, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 3

Gene RUFY3, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-214ENST00000515442 ARID3AQ99856 593 aa8.59□□□□□ -1.03
RUFY3-214ENST00000515442 C1orf115Q9H7X2 142 aa8.59□□□□□ -1.03
RUFY3-214ENST00000515442 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.59□□□□□ -1.03
RUFY3-214ENST00000515442 C6orf229H3BNL8 230 aa8.58□□□□□ -1.04
RUFY3-214ENST00000515442 USP17L8P0C7I0 530 aa8.58□□□□□ -1.04
RUFY3-214ENST00000515442 PRR14Q9BWN1 585 aa8.58□□□□□ -1.04
RUFY3-214ENST00000515442 FNBP4Q8N3X1 1017 aaPredicted RBP8.57□□□□□ -1.04
RUFY3-214ENST00000515442 ANKK1Q8NFD2 765 aa8.57□□□□□ -1.04
RUFY3-214ENST00000515442 HELBQ8NG08 1087 aaPredicted RBP8.57□□□□□ -1.04
RUFY3-214ENST00000515442 ANKRD13DQ6ZTN6 518 aa8.56□□□□□ -1.04
RUFY3-214ENST00000515442 TSC1Q92574 1164 aa8.56□□□□□ -1.04
RUFY3-214ENST00000515442 GDPD2Q9HCC8 539 aa8.56□□□□□ -1.04
RUFY3-214ENST00000515442 ZNF777Q9ULD5 760 aaPredicted RBP8.56□□□□□ -1.04
RUFY3-214ENST00000515442 HRO43593 1189 aa8.55□□□□□ -1.04
RUFY3-214ENST00000515442 ACTN4O43707 911 aaKnown RBP8.55□□□□□ -1.04
RUFY3-214ENST00000515442 ZNF330Q9Y3S2 320 aaPredicted RBP8.55□□□□□ -1.04
RUFY3-214ENST00000515442 PPP4CP60510 307 aa8.54□□□□□ -1.04
RUFY3-214ENST00000515442 Q3C1V9 767 aa8.54□□□□□ -1.04
RUFY3-214ENST00000515442 ABL2P42684 1182 aa8.53□□□□□ -1.04
RUFY3-214ENST00000515442 CTDSPL2Q05D32 466 aa8.53□□□□□ -1.04
RUFY3-214ENST00000515442 NDUFB9Q9Y6M9 179 aa8.53□□□□□ -1.04
RUFY3-214ENST00000515442 CFAP99D6REC4 459 aa8.52□□□□□ -1.05
RUFY3-214ENST00000515442 RANGAP1P46060 587 aaPredicted RBP8.52□□□□□ -1.05
RUFY3-214ENST00000515442 MORN1Q5T089 497 aa8.52□□□□□ -1.05
RUFY3-214ENST00000515442 TBC1D2BQ9UPU7 963 aa8.52□□□□□ -1.05
RUFY3-214ENST00000515442 HPS5Q9UPZ3 1129 aa8.52□□□□□ -1.05
RUFY3-214ENST00000515442 SOWAHBA6NEL2 793 aa8.51□□□□□ -1.05
RUFY3-214ENST00000515442 PUS10Q3MIT2 529 aaKnown RBP8.51□□□□□ -1.05
RUFY3-214ENST00000515442 LCE2DQ5TA82 110 aaPredicted RBP8.51□□□□□ -1.05
RUFY3-214ENST00000515442 CCDC82Q8N4S0 544 aa8.51□□□□□ -1.05
RUFY3-214ENST00000515442 PRR7Q8TB68 274 aa8.51□□□□□ -1.05
RUFY3-214ENST00000515442 TSR3Q9UJK0 312 aaKnown RBP8.51□□□□□ -1.05
RUFY3-214ENST00000515442 RETREG3Q86VR2 466 aa8.5□□□□□ -1.05
RUFY3-214ENST00000515442 SYMPKQ92797 1274 aaKnown RBP8.5□□□□□ -1.05
RUFY3-214ENST00000515442 WNT2BQ93097 391 aa8.5□□□□□ -1.05
RUFY3-214ENST00000515442 CCDC97Q96F63 343 aaPredicted RBP8.5□□□□□ -1.05
RUFY3-214ENST00000515442 SERPINA10Q9UK55 444 aa8.5□□□□□ -1.05
RUFY3-214ENST00000515442 SLC27A5Q9Y2P5 690 aa8.5□□□□□ -1.05
RUFY3-214ENST00000515442 BCAMP50895 628 aa8.49□□□□□ -1.05
RUFY3-214ENST00000515442 GJD4Q96KN9 370 aaPredicted RBP8.49□□□□□ -1.05
RUFY3-214ENST00000515442 LRRN4Q8WUT4 740 aa8.48□□□□□ -1.05
RUFY3-214ENST00000515442 HMX1Q9NP08 348 aaPredicted RBP8.48□□□□□ -1.05
RUFY3-214ENST00000515442 PCDHB3Q9Y5E6 796 aa8.47□□□□□ -1.05
RUFY3-214ENST00000515442 NR1I2O75469 434 aa8.46□□□□□ -1.06
RUFY3-214ENST00000515442 APLP1P51693 650 aa8.46□□□□□ -1.06
RUFY3-214ENST00000515442 DESI1Q6ICB0 168 aa8.46□□□□□ -1.06
RUFY3-214ENST00000515442 PLSCR2Q9NRY7 297 aa8.46□□□□□ -1.06
RUFY3-214ENST00000515442 SALL2Q9Y467 1007 aaPredicted RBP8.46□□□□□ -1.06
RUFY3-214ENST00000515442 FMNL1O95466 1100 aaPredicted RBP8.45□□□□□ -1.06
RUFY3-214ENST00000515442 WASHC4Q2M389 1173 aa8.45□□□□□ -1.06
RUFY3-214ENST00000515442 USB1Q9BQ65 265 aaKnown RBP8.45□□□□□ -1.06
RUFY3-214ENST00000515442 TRIM34Q9BYJ4 488 aa8.45□□□□□ -1.06
RUFY3-214ENST00000515442 BRICD5Q6PL45 260 aa8.44□□□□□ -1.06
RUFY3-214ENST00000515442 PNMA1Q8ND90 353 aa8.44□□□□□ -1.06
RUFY3-214ENST00000515442 CALR3Q96L12 384 aaKnown RBP8.44□□□□□ -1.06
RUFY3-214ENST00000515442 BLOC1S3Q6QNY0 202 aa8.43□□□□□ -1.06
RUFY3-214ENST00000515442 RNF19BQ6ZMZ0 732 aa8.43□□□□□ -1.06
RUFY3-214ENST00000515442 SCUBE3Q8IX30 993 aa8.43□□□□□ -1.06
RUFY3-214ENST00000515442 PER1O15534 1290 aaPredicted RBP8.42□□□□□ -1.06
RUFY3-214ENST00000515442 IRF5Q13568 498 aa8.42□□□□□ -1.06
RUFY3-214ENST00000515442 NR6A1Q15406 480 aa8.42□□□□□ -1.06
RUFY3-214ENST00000515442 WBP1LQ9NX94 342 aa8.42□□□□□ -1.06
RUFY3-214ENST00000515442 POM121CA8CG34 1229 aa8.41□□□□□ -1.06
RUFY3-214ENST00000515442 LYPD8Q6UX82 237 aa8.41□□□□□ -1.06
RUFY3-214ENST00000515442 EPS8L1Q8TE68 723 aa8.41□□□□□ -1.06
RUFY3-214ENST00000515442 GLMNQ92990 594 aa8.41□□□□□ -1.06
RUFY3-214ENST00000515442 THSD4Q6ZMP0 1018 aa8.4□□□□□ -1.06
RUFY3-214ENST00000515442 PODXL2Q9NZ53 605 aa8.4□□□□□ -1.06
RUFY3-214ENST00000515442 NYAP1Q6ZVC0 841 aa8.39□□□□□ -1.07
RUFY3-214ENST00000515442 KCTD12Q96CX2 325 aaKnown RBP8.39□□□□□ -1.07
RUFY3-214ENST00000515442 THAP11Q96EK4 314 aa8.39□□□□□ -1.07
RUFY3-214ENST00000515442 KRTAP3-3Q9BYR6 98 aa8.39□□□□□ -1.07
RUFY3-214ENST00000515442 KRTAP3-2Q9BYR7 98 aa8.39□□□□□ -1.07
RUFY3-214ENST00000515442 JUNDP17535 347 aa8.38□□□□□ -1.07
RUFY3-214ENST00000515442 VAC14Q08AM6 782 aa8.38□□□□□ -1.07
RUFY3-214ENST00000515442 HDGFL1Q5TGJ6 251 aa8.38□□□□□ -1.07
RUFY3-214ENST00000515442 GPR37L1O60883 481 aa8.37□□□□□ -1.07
RUFY3-214ENST00000515442 COPS2P61201 443 aa8.37□□□□□ -1.07
RUFY3-214ENST00000515442 PTPRNQ16849 979 aa8.36□□□□□ -1.07
RUFY3-214ENST00000515442 MSS51Q4VC12 460 aa8.36□□□□□ -1.07
RUFY3-214ENST00000515442 SPSB2Q99619 263 aa8.36□□□□□ -1.07
RUFY3-214ENST00000515442 SOX11P35716 441 aa8.35□□□□□ -1.07
RUFY3-214ENST00000515442 CTHP32929 405 aa8.34□□□□□ -1.07
RUFY3-214ENST00000515442 F12P00748 615 aaPredicted RBP8.33□□□□□ -1.08
RUFY3-214ENST00000515442 PDIA4P13667 645 aaKnown RBP8.33□□□□□ -1.08
RUFY3-214ENST00000515442 EIF4G2P78344 907 aaKnown RBP eCLIP8.33□□□□□ -1.08
RUFY3-214ENST00000515442 SEMA3FQ13275 785 aa8.33□□□□□ -1.08
RUFY3-214ENST00000515442 FKBPLQ9UIM3 349 aa8.33□□□□□ -1.08
RUFY3-214ENST00000515442 PPP1R15AO75807 674 aaPredicted RBP8.32□□□□□ -1.08
RUFY3-214ENST00000515442 DXOO77932 396 aaKnown RBP8.32□□□□□ -1.08
RUFY3-214ENST00000515442 CCNYL3P0C7X3 344 aa8.32□□□□□ -1.08
RUFY3-214ENST00000515442 FAM160A2Q8N612 972 aaPredicted RBP8.32□□□□□ -1.08
RUFY3-214ENST00000515442 ARMC2Q8NEN0 867 aa8.32□□□□□ -1.08
RUFY3-214ENST00000515442 ADAMTS19Q8TE59 1207 aa8.32□□□□□ -1.08
RUFY3-214ENST00000515442 ALG2Q9H553 416 aa8.32□□□□□ -1.08
RUFY3-214ENST00000515442 MAP10Q9P2G4 905 aa8.32□□□□□ -1.08
RUFY3-214ENST00000515442 ZC3H4Q9UPT8 1303 aaKnown RBP8.31□□□□□ -1.08
RUFY3-214ENST00000515442 ZPR1O75312 459 aa8.31□□□□□ -1.08
RUFY3-214ENST00000515442 ADH1BP00325 375 aa8.31□□□□□ -1.08
RUFY3-214ENST00000515442 PTPN5P54829 565 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms