RNA–Protein interactions for RNA: ENST00000514962.5

CALCOCO2-224, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 765 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-224ENST00000514962 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.22□□□□□ -1.09
CALCOCO2-224ENST00000514962 TOPBP1Q92547 1522 aa8.22□□□□□ -1.09
CALCOCO2-224ENST00000514962 ZMYM3Q14202 1370 aa8.22□□□□□ -1.09
CALCOCO2-224ENST00000514962 CROCC2H7BZ55 1655 aa8.21□□□□□ -1.09
CALCOCO2-224ENST00000514962 FANCD2Q9BXW9 1451 aa8.21□□□□□ -1.09
CALCOCO2-224ENST00000514962 HSP90AA2PQ14568 343 aaPredicted RBP8.21□□□□□ -1.1
CALCOCO2-224ENST00000514962 FAM163AQ96GL9 167 aaPredicted RBP8.21□□□□□ -1.1
CALCOCO2-224ENST00000514962 PNNQ9H307 717 aaKnown RBP8.21□□□□□ -1.1
CALCOCO2-224ENST00000514962 RAD54L2Q9Y4B4 1467 aa8.2□□□□□ -1.1
CALCOCO2-224ENST00000514962 KDM5DQ9BY66 1539 aa8.2□□□□□ -1.1
CALCOCO2-224ENST00000514962 CEP170Q5SW79 1584 aa8.2□□□□□ -1.1
CALCOCO2-224ENST00000514962 SLC4A3P48751 1232 aa8.2□□□□□ -1.1
CALCOCO2-224ENST00000514962 ISY1Q9ULR0 285 aaKnown RBP8.2□□□□□ -1.1
CALCOCO2-224ENST00000514962 CENPJQ9HC77 1338 aaPredicted RBP8.2□□□□□ -1.1
CALCOCO2-224ENST00000514962 ITSN2Q9NZM3 1697 aa8.2□□□□□ -1.1
CALCOCO2-224ENST00000514962 ZNF608Q9ULD9 1512 aaPredicted RBP8.19□□□□□ -1.1
CALCOCO2-224ENST00000514962 LAMC3Q9Y6N6 1575 aa8.19□□□□□ -1.1
CALCOCO2-224ENST00000514962 FSD2A1L4K1 749 aa8.19□□□□□ -1.1
CALCOCO2-224ENST00000514962 FBXO22Q8NEZ5 403 aa8.19□□□□□ -1.1
CALCOCO2-224ENST00000514962 NAP1L5Q96NT1 182 aaPredicted RBP8.19□□□□□ -1.1
CALCOCO2-224ENST00000514962 GOLGA6L3A6NEY3 463 aa8.18□□□□□ -1.1
CALCOCO2-224ENST00000514962 TPM2P07951 284 aa8.18□□□□□ -1.1
CALCOCO2-224ENST00000514962 MICALL2Q8IY33 904 aa8.18□□□□□ -1.1
CALCOCO2-224ENST00000514962 POLR3GLQ9BT43 218 aa8.18□□□□□ -1.1
CALCOCO2-224ENST00000514962 MAPK8IP3Q9UPT6 1336 aa8.18□□□□□ -1.1
CALCOCO2-224ENST00000514962 NINLQ9Y2I6 1382 aa8.18□□□□□ -1.1
CALCOCO2-224ENST00000514962 PPP1R37O75864 691 aa8.17□□□□□ -1.1
CALCOCO2-224ENST00000514962 MS4A4AQ96JQ5 239 aa8.17□□□□□ -1.1
CALCOCO2-224ENST00000514962 TMEM121BQ9BXQ6 578 aaPredicted RBP8.17□□□□□ -1.1
CALCOCO2-224ENST00000514962 POGKQ9P215 609 aa8.17□□□□□ -1.1
CALCOCO2-224ENST00000514962 TRPM1Q7Z4N2 1603 aa8.17□□□□□ -1.1
CALCOCO2-224ENST00000514962 CDCA7LQ96GN5 454 aa8.16□□□□□ -1.1
CALCOCO2-224ENST00000514962 CARD11Q9BXL7 1154 aa8.16□□□□□ -1.1
CALCOCO2-224ENST00000514962 IQGAP2Q13576 1575 aa8.15□□□□□ -1.1
CALCOCO2-224ENST00000514962 CDK13Q14004 1512 aaKnown RBP8.15□□□□□ -1.1
CALCOCO2-224ENST00000514962 CAMSAP2Q08AD1 1489 aa8.15□□□□□ -1.1
CALCOCO2-224ENST00000514962 COL17A1Q9UMD9 1497 aaPredicted RBP8.15□□□□□ -1.1
CALCOCO2-224ENST00000514962 USP19O94966 1318 aa8.15□□□□□ -1.1
CALCOCO2-224ENST00000514962 PLIN1O60240 522 aa8.15□□□□□ -1.1
CALCOCO2-224ENST00000514962 MRE11P49959 708 aa8.15□□□□□ -1.1
CALCOCO2-224ENST00000514962 AAMPQ13685 434 aa8.15□□□□□ -1.1
CALCOCO2-224ENST00000514962 LMOD2Q6P5Q4 547 aa8.15□□□□□ -1.1
CALCOCO2-224ENST00000514962 ADCY10Q96PN6 1610 aa8.14□□□□□ -1.11
CALCOCO2-224ENST00000514962 NLRP1Q9C000 1473 aa8.14□□□□□ -1.11
CALCOCO2-224ENST00000514962 SCAPERQ9BY12 1400 aa8.14□□□□□ -1.11
CALCOCO2-224ENST00000514962 ANKRD30AQ9BXX3 1397 aa8.14□□□□□ -1.11
CALCOCO2-224ENST00000514962 XRCC6P12956 609 aaKnown RBP eCLIP8.14□□□□□ -1.11
CALCOCO2-224ENST00000514962 PUS7Q96PZ0 661 aaKnown RBP8.14□□□□□ -1.11
CALCOCO2-224ENST00000514962 ANTXR1Q9H6X2 564 aa8.14□□□□□ -1.11
CALCOCO2-224ENST00000514962 EIF4G3O43432 1585 aaKnown RBP8.14□□□□□ -1.11
CALCOCO2-224ENST00000514962 PLXNC1O60486 1568 aa8.14□□□□□ -1.11
CALCOCO2-224ENST00000514962 KIAA0586Q9BVV6 1533 aa8.13□□□□□ -1.11
CALCOCO2-224ENST00000514962 SHANK2Q9UPX8 1470 aa8.13□□□□□ -1.11
CALCOCO2-224ENST00000514962 GPRASP1Q5JY77 1395 aa8.13□□□□□ -1.11
CALCOCO2-224ENST00000514962 POTEMA6NI47 508 aa8.13□□□□□ -1.11
CALCOCO2-224ENST00000514962 PER1O15534 1290 aaPredicted RBP8.13□□□□□ -1.11
CALCOCO2-224ENST00000514962 IGSF3O75054 1194 aa8.13□□□□□ -1.11
CALCOCO2-224ENST00000514962 NGEFQ8N5V2 710 aa8.13□□□□□ -1.11
CALCOCO2-224ENST00000514962 EIF2AK4Q9P2K8 1649 aaKnown RBP8.13□□□□□ -1.11
CALCOCO2-224ENST00000514962 PRDM15P57071 1507 aaPredicted RBP8.13□□□□□ -1.11
CALCOCO2-224ENST00000514962 ABCC2Q92887 1545 aa8.13□□□□□ -1.11
CALCOCO2-224ENST00000514962 ZNF521Q96K83 1311 aa8.12□□□□□ -1.11
CALCOCO2-224ENST00000514962 ST20-MTHFSA0A0A6YYL1 179 aa8.12□□□□□ -1.11
CALCOCO2-224ENST00000514962 PTMSP20962 102 aa8.12□□□□□ -1.11
CALCOCO2-224ENST00000514962 CALD1Q05682 793 aaKnown RBP8.12□□□□□ -1.11
CALCOCO2-224ENST00000514962 CNGB1Q14028 1251 aaPredicted RBP8.12□□□□□ -1.11
CALCOCO2-224ENST00000514962 C20orf194Q5TEA3 1177 aa8.12□□□□□ -1.11
CALCOCO2-224ENST00000514962 DUSP27Q5VZP5 1158 aa8.12□□□□□ -1.11
CALCOCO2-224ENST00000514962 POTEGQ6S5H5 508 aa8.12□□□□□ -1.11
CALCOCO2-224ENST00000514962 CADPS2Q86UW7 1296 aa8.12□□□□□ -1.11
CALCOCO2-224ENST00000514962 SKAP1Q86WV1 359 aa8.12□□□□□ -1.11
CALCOCO2-224ENST00000514962 PDCL3Q9H2J4 239 aa8.12□□□□□ -1.11
CALCOCO2-224ENST00000514962 UPF2Q9HAU5 1272 aaKnown RBP8.12□□□□□ -1.11
CALCOCO2-224ENST00000514962 CGNL1Q0VF96 1302 aa8.11□□□□□ -1.11
CALCOCO2-224ENST00000514962 MCM4P33991 863 aa8.11□□□□□ -1.11
CALCOCO2-224ENST00000514962 TERF1P54274 439 aa8.11□□□□□ -1.11
CALCOCO2-224ENST00000514962 ZNF326Q5BKZ1 582 aaKnown RBP8.11□□□□□ -1.11
CALCOCO2-224ENST00000514962 TRMT2AQ8IZ69 625 aaKnown RBP8.11□□□□□ -1.11
CALCOCO2-224ENST00000514962 KCTD17Q8N5Z5 321 aa8.11□□□□□ -1.11
CALCOCO2-224ENST00000514962 PTPRGP23470 1445 aa8.11□□□□□ -1.11
CALCOCO2-224ENST00000514962 DDX11L8A8MPP1 907 aa8.1□□□□□ -1.11
CALCOCO2-224ENST00000514962 ESPNB1AK53 854 aa8.1□□□□□ -1.11
CALCOCO2-224ENST00000514962 RAD21O60216 631 aa8.1□□□□□ -1.11
CALCOCO2-224ENST00000514962 ST18O60284 1047 aa8.1□□□□□ -1.11
CALCOCO2-224ENST00000514962 RGS3P49796 1198 aa8.1□□□□□ -1.11
CALCOCO2-224ENST00000514962 DOK7Q18PE1 504 aa8.1□□□□□ -1.11
CALCOCO2-224ENST00000514962 MAP7D2Q96T17 732 aa8.1□□□□□ -1.11
CALCOCO2-224ENST00000514962 CHMP4AQ9BY43 222 aa8.1□□□□□ -1.11
CALCOCO2-224ENST00000514962 CHMP5Q9NZZ3 219 aa8.1□□□□□ -1.11
CALCOCO2-224ENST00000514962 NKTRP30414 1462 aaKnown RBP8.1□□□□□ -1.11
CALCOCO2-224ENST00000514962 NUP160Q12769 1436 aa8.1□□□□□ -1.11
CALCOCO2-224ENST00000514962 PRAG1Q86YV5 1406 aa8.1□□□□□ -1.11
CALCOCO2-224ENST00000514962 RAPGEF6Q8TEU7 1601 aa8.1□□□□□ -1.11
CALCOCO2-224ENST00000514962 SENP3-EIF4A1A0A087X0R7 540 aa8.09□□□□□ -1.11
CALCOCO2-224ENST00000514962 RIMBP2O15034 1052 aa8.09□□□□□ -1.11
CALCOCO2-224ENST00000514962 SLFN5Q08AF3 891 aa8.09□□□□□ -1.11
CALCOCO2-224ENST00000514962 PDE3AQ14432 1141 aa8.09□□□□□ -1.11
CALCOCO2-224ENST00000514962 ZNF710Q8N1W2 664 aa8.09□□□□□ -1.11
CALCOCO2-224ENST00000514962 TBC1D32Q96NH3 1257 aa8.09□□□□□ -1.11
CALCOCO2-224ENST00000514962 PIK3C2GO75747 1445 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms