RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 ADGRF5Q8IZF2 1346 aa10.21□□□□□ -0.78
SMAD1-213ENST00000514778 PRAG1Q86YV5 1406 aa10.21□□□□□ -0.78
SMAD1-213ENST00000514778 NRXN3Q9Y4C0 1643 aa10.21□□□□□ -0.78
SMAD1-213ENST00000514778 LAMC1P11047 1609 aa10.2□□□□□ -0.78
SMAD1-213ENST00000514778 MNX1P50219 401 aaPredicted RBP10.2□□□□□ -0.78
SMAD1-213ENST00000514778 NEUROD1Q13562 356 aa10.2□□□□□ -0.78
SMAD1-213ENST00000514778 IQSEC2Q5JU85 1478 aa10.2□□□□□ -0.78
SMAD1-213ENST00000514778 NUTM2DQ5VT03 806 aaPredicted RBP10.2□□□□□ -0.78
SMAD1-213ENST00000514778 TONSLQ96HA7 1378 aa10.2□□□□□ -0.78
SMAD1-213ENST00000514778 ALKQ9UM73 1620 aa10.19□□□□□ -0.78
SMAD1-213ENST00000514778 NWD1Q149M9 1564 aa10.19□□□□□ -0.78
SMAD1-213ENST00000514778 NKTRP30414 1462 aaKnown RBP10.19□□□□□ -0.78
SMAD1-213ENST00000514778 NCOA3Q9Y6Q9 1424 aa10.19□□□□□ -0.78
SMAD1-213ENST00000514778 LTBP4Q8N2S1 1624 aa10.18□□□□□ -0.78
SMAD1-213ENST00000514778 ZNF579Q8NAF0 562 aaKnown RBP10.18□□□□□ -0.78
SMAD1-213ENST00000514778 SIRT1Q96EB6 747 aa10.18□□□□□ -0.78
SMAD1-213ENST00000514778 ZRANB1Q9UGI0 708 aa10.18□□□□□ -0.78
SMAD1-213ENST00000514778 ZNF335Q9H4Z2 1342 aaPredicted RBP10.17□□□□□ -0.78
SMAD1-213ENST00000514778 KDM2AQ9Y2K7 1162 aa10.17□□□□□ -0.78
SMAD1-213ENST00000514778 TECPR2O15040 1411 aa10.16□□□□□ -0.78
SMAD1-213ENST00000514778 KIAA1210Q9ULL0 1709 aa10.16□□□□□ -0.78
SMAD1-213ENST00000514778 METP08581 1390 aa10.16□□□□□ -0.78
SMAD1-213ENST00000514778 ABCC11Q96J66 1382 aa10.16□□□□□ -0.78
SMAD1-213ENST00000514778 PAK3O75914 559 aaPredicted RBP10.16□□□□□ -0.78
SMAD1-213ENST00000514778 AMOTL2Q9Y2J4 779 aa10.16□□□□□ -0.78
SMAD1-213ENST00000514778 SETD1AO15047 1707 aaKnown RBP10.16□□□□□ -0.78
SMAD1-213ENST00000514778 PTCH1Q13635 1447 aa10.16□□□□□ -0.78
SMAD1-213ENST00000514778 LRPPRCP42704 1394 aaKnown RBP10.15□□□□□ -0.78
SMAD1-213ENST00000514778 CHD2O14647 1828 aaKnown RBP10.15□□□□□ -0.78
SMAD1-213ENST00000514778 CFAP70Q5T0N1 1121 aa10.15□□□□□ -0.78
SMAD1-213ENST00000514778 LRRC7Q96NW7 1537 aa10.14□□□□□ -0.79
SMAD1-213ENST00000514778 XRN1Q8IZH2 1706 aaKnown RBP10.14□□□□□ -0.79
SMAD1-213ENST00000514778 CERKQ8TCT0 537 aa10.14□□□□□ -0.79
SMAD1-213ENST00000514778 FAM135BQ49AJ0 1406 aa10.14□□□□□ -0.79
SMAD1-213ENST00000514778 PTPRUQ92729 1446 aa10.14□□□□□ -0.79
SMAD1-213ENST00000514778 YTHDC2Q9H6S0 1430 aaKnown RBP10.14□□□□□ -0.79
SMAD1-213ENST00000514778 ADGRB1O14514 1584 aa10.14□□□□□ -0.79
SMAD1-213ENST00000514778 FKBP8Q14318 412 aa10.13□□□□□ -0.79
SMAD1-213ENST00000514778 DLC1Q96QB1 1528 aa10.12□□□□□ -0.79
SMAD1-213ENST00000514778 PROSER2Q86WR7 435 aaPredicted RBP10.12□□□□□ -0.79
SMAD1-213ENST00000514778 ASXL1Q8IXJ9 1541 aa10.12□□□□□ -0.79
SMAD1-213ENST00000514778 PLEKHG5O94827 1062 aa10.11□□□□□ -0.79
SMAD1-213ENST00000514778 TMEM94Q12767 1356 aa10.11□□□□□ -0.79
SMAD1-213ENST00000514778 GPRASP1Q5JY77 1395 aa10.11□□□□□ -0.79
SMAD1-213ENST00000514778 STRCP1A6NGW2 1772 aa10.11□□□□□ -0.79
SMAD1-213ENST00000514778 KNDC1Q76NI1 1749 aa10.1□□□□□ -0.79
SMAD1-213ENST00000514778 TMEM132EQ6IEE7 984 aa10.1□□□□□ -0.79
SMAD1-213ENST00000514778 C19orf44Q9H6X5 657 aa10.1□□□□□ -0.79
SMAD1-213ENST00000514778 RALGAPBQ86X10 1494 aa10.1□□□□□ -0.79
SMAD1-213ENST00000514778 DCCP43146 1447 aa10.09□□□□□ -0.79
SMAD1-213ENST00000514778 TRPM1Q7Z4N2 1603 aa10.09□□□□□ -0.79
SMAD1-213ENST00000514778 ROCK2O75116 1388 aaKnown RBP10.09□□□□□ -0.79
SMAD1-213ENST00000514778 MSH6P52701 1360 aa10.09□□□□□ -0.79
SMAD1-213ENST00000514778 ROBO2Q9HCK4 1378 aa10.09□□□□□ -0.79
SMAD1-213ENST00000514778 SLC24A1O60721 1099 aa10.08□□□□□ -0.8
SMAD1-213ENST00000514778 TOM1O60784 492 aa10.08□□□□□ -0.8
SMAD1-213ENST00000514778 NBPF1Q3BBV0 1214 aa10.08□□□□□ -0.8
SMAD1-213ENST00000514778 NBPF8Q3BBV2 869 aa10.08□□□□□ -0.8
SMAD1-213ENST00000514778 CADPS2Q86UW7 1296 aa10.08□□□□□ -0.8
SMAD1-213ENST00000514778 EIF3AQ14152 1382 aaKnown RBP10.07□□□□□ -0.8
SMAD1-213ENST00000514778 MIER1Q8N108 512 aa10.07□□□□□ -0.8
SMAD1-213ENST00000514778 STK26Q9P289 416 aa10.07□□□□□ -0.8
SMAD1-213ENST00000514778 ADGRL3Q9HAR2 1447 aa10.07□□□□□ -0.8
SMAD1-213ENST00000514778 TRAK1Q9UPV9 953 aa10.06□□□□□ -0.8
SMAD1-213ENST00000514778 ATF3P18847 181 aa10.05□□□□□ -0.8
SMAD1-213ENST00000514778 C14orf37Q86TY3 774 aa10.05□□□□□ -0.8
SMAD1-213ENST00000514778 PRAM1Q96QH2 718 aa10.05□□□□□ -0.8
SMAD1-213ENST00000514778 CARD11Q9BXL7 1154 aa10.05□□□□□ -0.8
SMAD1-213ENST00000514778 POGKQ9P215 609 aa10.05□□□□□ -0.8
SMAD1-213ENST00000514778 POTEIP0CG38 1075 aa10.04□□□□□ -0.8
SMAD1-213ENST00000514778 WAPLQ7Z5K2 1190 aa10.04□□□□□ -0.8
SMAD1-213ENST00000514778 DCBLD2Q96PD2 775 aa10.04□□□□□ -0.8
SMAD1-213ENST00000514778 XIRP1Q702N8 1843 aaKnown RBP10.04□□□□□ -0.8
SMAD1-213ENST00000514778 SBNO2Q9Y2G9 1366 aa10.03□□□□□ -0.8
SMAD1-213ENST00000514778 CDC42BPGQ6DT37 1551 aa10.03□□□□□ -0.8
SMAD1-213ENST00000514778 FBXO41Q8TF61 875 aa10.03□□□□□ -0.8
SMAD1-213ENST00000514778 CENPJQ9HC77 1338 aaPredicted RBP10.03□□□□□ -0.8
SMAD1-213ENST00000514778 ADGRB2O60241 1585 aa10.02□□□□□ -0.81
SMAD1-213ENST00000514778 UBAP1LF5GYI3 381 aa10.02□□□□□ -0.81
SMAD1-213ENST00000514778 ZEB1P37275 1124 aaPredicted RBP10.02□□□□□ -0.81
SMAD1-213ENST00000514778 PHF12Q96QT6 1004 aa10.02□□□□□ -0.81
SMAD1-213ENST00000514778 SLAIN2Q9P270 581 aa10.02□□□□□ -0.81
SMAD1-213ENST00000514778 ARHGEF28Q8N1W1 1705 aaKnown RBP10.02□□□□□ -0.81
SMAD1-213ENST00000514778 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.02□□□□□ -0.81
SMAD1-213ENST00000514778 PLEKHH1Q9ULM0 1364 aa10.01□□□□□ -0.81
SMAD1-213ENST00000514778 GALR2O43603 387 aaPredicted RBP10.01□□□□□ -0.81
SMAD1-213ENST00000514778 PLCD3Q8N3E9 789 aa10.01□□□□□ -0.81
SMAD1-213ENST00000514778 RBM33Q96EV2 1170 aaKnown RBP10.01□□□□□ -0.81
SMAD1-213ENST00000514778 NALCNQ8IZF0 1738 aa10.01□□□□□ -0.81
SMAD1-213ENST00000514778 PUS7Q96PZ0 661 aaKnown RBP10□□□□□ -0.81
SMAD1-213ENST00000514778 MST1RQ04912 1400 aa9.99□□□□□ -0.81
SMAD1-213ENST00000514778 ANKARQ7Z5J8 1434 aa9.99□□□□□ -0.81
SMAD1-213ENST00000514778 WASLO00401 505 aaPredicted RBP9.99□□□□□ -0.81
SMAD1-213ENST00000514778 ZBTB47Q9UFB7 747 aaPredicted RBP9.99□□□□□ -0.81
SMAD1-213ENST00000514778 EVC2Q86UK5 1308 aa9.98□□□□□ -0.81
SMAD1-213ENST00000514778 USP47Q96K76 1375 aa9.98□□□□□ -0.81
SMAD1-213ENST00000514778 C1orf167Q5SNV9 1468 aa9.98□□□□□ -0.81
SMAD1-213ENST00000514778 EIF4G2P78344 907 aaKnown RBP eCLIP9.97□□□□□ -0.81
SMAD1-213ENST00000514778 TSPYL2Q9H2G4 693 aaPredicted RBP9.97□□□□□ -0.81
SMAD1-213ENST00000514778 MINK1Q8N4C8 1332 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms