RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 KANK1Q14678 1352 aa5.25□□□□□ -1.57
CHD1-211ENST00000514344 EHBP1L1Q8N3D4 1523 aa5.25□□□□□ -1.57
CHD1-211ENST00000514344 ARHGEF5Q12774 1597 aa5.25□□□□□ -1.57
CHD1-211ENST00000514344 EZH2Q15910 746 aaKnown RBP5.25□□□□□ -1.57
CHD1-211ENST00000514344 UNC5CLQ8IV45 518 aa5.25□□□□□ -1.57
CHD1-211ENST00000514344 SOS2Q07890 1332 aaPredicted RBP5.25□□□□□ -1.57
CHD1-211ENST00000514344 CEP162Q5TB80 1403 aa5.25□□□□□ -1.57
CHD1-211ENST00000514344 KIF15Q9NS87 1388 aa5.25□□□□□ -1.57
CHD1-211ENST00000514344 GCC2Q8IWJ2 1684 aa5.24□□□□□ -1.57
CHD1-211ENST00000514344 DUOX2Q9NRD8 1548 aa5.24□□□□□ -1.57
CHD1-211ENST00000514344 CAPN15O75808 1086 aa5.24□□□□□ -1.57
CHD1-211ENST00000514344 C1orf167Q5SNV9 1468 aa5.23□□□□□ -1.57
CHD1-211ENST00000514344 NOS1P29475 1434 aa5.23□□□□□ -1.57
CHD1-211ENST00000514344 ADGRL3Q9HAR2 1447 aa5.23□□□□□ -1.57
CHD1-211ENST00000514344 PIK3R4Q99570 1358 aa5.23□□□□□ -1.57
CHD1-211ENST00000514344 SPHKAPQ2M3C7 1700 aa5.23□□□□□ -1.57
CHD1-211ENST00000514344 MYOM2P54296 1465 aa5.23□□□□□ -1.57
CHD1-211ENST00000514344 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.23□□□□□ -1.57
CHD1-211ENST00000514344 MARF1Q9Y4F3 1742 aaKnown RBP5.23□□□□□ -1.57
CHD1-211ENST00000514344 FAM98CQ17RN3 349 aaKnown RBP5.22□□□□□ -1.57
CHD1-211ENST00000514344 CNKSR2Q8WXI2 1034 aa5.22□□□□□ -1.57
CHD1-211ENST00000514344 NALCNQ8IZF0 1738 aa5.22□□□□□ -1.57
CHD1-211ENST00000514344 FOXO3O43524 673 aa5.22□□□□□ -1.57
CHD1-211ENST00000514344 HAP1P54257 671 aaPredicted RBP5.22□□□□□ -1.57
CHD1-211ENST00000514344 SPON1Q9HCB6 807 aa5.22□□□□□ -1.57
CHD1-211ENST00000514344 TMEM131LA2VDJ0 1609 aa5.22□□□□□ -1.57
CHD1-211ENST00000514344 ERBINQ96RT1 1412 aa5.22□□□□□ -1.57
CHD1-211ENST00000514344 SLIT2O94813 1529 aa5.21□□□□□ -1.57
CHD1-211ENST00000514344 COL22A1Q8NFW1 1626 aaPredicted RBP5.21□□□□□ -1.58
CHD1-211ENST00000514344 ESCO1Q5FWF5 840 aa5.21□□□□□ -1.58
CHD1-211ENST00000514344 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.21□□□□□ -1.58
CHD1-211ENST00000514344 METP08581 1390 aa5.21□□□□□ -1.58
CHD1-211ENST00000514344 NUTM2FA1L443 756 aa5.21□□□□□ -1.58
CHD1-211ENST00000514344 TRIM37O94972 964 aa5.21□□□□□ -1.58
CHD1-211ENST00000514344 CHIC2Q9UKJ5 165 aa5.21□□□□□ -1.58
CHD1-211ENST00000514344 GIGYF1O75420 1035 aaPredicted RBP5.2□□□□□ -1.58
CHD1-211ENST00000514344 CABLES1Q8TDN4 633 aa5.2□□□□□ -1.58
CHD1-211ENST00000514344 RBM42Q9BTD8 480 aaKnown RBP5.2□□□□□ -1.58
CHD1-211ENST00000514344 NINLQ9Y2I6 1382 aa5.2□□□□□ -1.58
CHD1-211ENST00000514344 XRN1Q8IZH2 1706 aaKnown RBP5.2□□□□□ -1.58
CHD1-211ENST00000514344 NPHP3Q7Z494 1330 aa5.2□□□□□ -1.58
CHD1-211ENST00000514344 KCNQ2O43526 872 aa5.2□□□□□ -1.58
CHD1-211ENST00000514344 VPS72Q15906 364 aa5.2□□□□□ -1.58
CHD1-211ENST00000514344 ONECUT3O60422 494 aaPredicted RBP5.19□□□□□ -1.58
CHD1-211ENST00000514344 APBA3O96018 575 aa5.19□□□□□ -1.58
CHD1-211ENST00000514344 CAMKK2Q96RR4 588 aa5.19□□□□□ -1.58
CHD1-211ENST00000514344 RGPD1P0DJD0 1748 aa5.19□□□□□ -1.58
CHD1-211ENST00000514344 LAMC1P11047 1609 aa5.19□□□□□ -1.58
CHD1-211ENST00000514344 LMTK2Q8IWU2 1503 aa5.19□□□□□ -1.58
CHD1-211ENST00000514344 RPRD2Q5VT52 1461 aaKnown RBP5.19□□□□□ -1.58
CHD1-211ENST00000514344 NBPF8Q3BBV2 869 aa5.18□□□□□ -1.58
CHD1-211ENST00000514344 NBPF14Q5TI25 921 aa5.18□□□□□ -1.58
CHD1-211ENST00000514344 LMOD2Q6P5Q4 547 aa5.18□□□□□ -1.58
CHD1-211ENST00000514344 TNS1Q9HBL0 1735 aaKnown RBP5.18□□□□□ -1.58
CHD1-211ENST00000514344 MYOM3Q5VTT5 1437 aa5.18□□□□□ -1.58
CHD1-211ENST00000514344 PXDNQ92626 1479 aa5.18□□□□□ -1.58
CHD1-211ENST00000514344 USP32Q8NFA0 1604 aa5.18□□□□□ -1.58
CHD1-211ENST00000514344 CHD4Q14839 1912 aa5.17□□□□□ -1.58
CHD1-211ENST00000514344 ZNF326Q5BKZ1 582 aaKnown RBP5.17□□□□□ -1.58
CHD1-211ENST00000514344 NRXN3Q9Y4C0 1643 aa5.17□□□□□ -1.58
CHD1-211ENST00000514344 DISP2A7MBM2 1401 aa5.17□□□□□ -1.58
CHD1-211ENST00000514344 PDGFDQ9GZP0 370 aaPredicted RBP5.17□□□□□ -1.58
CHD1-211ENST00000514344 PTPN23Q9H3S7 1636 aa5.17□□□□□ -1.58
CHD1-211ENST00000514344 ZBTB7AO95365 584 aa5.16□□□□□ -1.58
CHD1-211ENST00000514344 PLCH1Q4KWH8 1693 aa5.16□□□□□ -1.58
CHD1-211ENST00000514344 ABCC5O15440 1437 aa5.16□□□□□ -1.58
CHD1-211ENST00000514344 SPINK5Q9NQ38 1064 aaPredicted RBP5.16□□□□□ -1.58
CHD1-211ENST00000514344 BTG4Q9NY30 223 aa5.16□□□□□ -1.58
CHD1-211ENST00000514344 ROBO2Q9HCK4 1378 aa5.16□□□□□ -1.58
CHD1-211ENST00000514344 ADGRL2O95490 1459 aa5.16□□□□□ -1.58
CHD1-211ENST00000514344 FAM83GA6ND36 823 aa5.16□□□□□ -1.58
CHD1-211ENST00000514344 SYT17Q9BSW7 474 aa5.16□□□□□ -1.58
CHD1-211ENST00000514344 FHDC1Q9C0D6 1143 aaPredicted RBP5.16□□□□□ -1.58
CHD1-211ENST00000514344 ATF5Q9Y2D1 282 aaPredicted RBP5.16□□□□□ -1.58
CHD1-211ENST00000514344 ADGRB2O60241 1585 aa5.16□□□□□ -1.58
CHD1-211ENST00000514344 NRKQ7Z2Y5 1582 aa5.16□□□□□ -1.58
CHD1-211ENST00000514344 SPATA31A3Q5VYP0 1347 aa5.15□□□□□ -1.58
CHD1-211ENST00000514344 CROCC2H7BZ55 1655 aa5.15□□□□□ -1.59
CHD1-211ENST00000514344 NUP188Q5SRE5 1749 aa5.15□□□□□ -1.59
CHD1-211ENST00000514344 FAM196AQ6ZSG2 479 aa5.14□□□□□ -1.59
CHD1-211ENST00000514344 USP35Q9P2H5 1018 aa5.14□□□□□ -1.59
CHD1-211ENST00000514344 ANKRD30AQ9BXX3 1397 aa5.14□□□□□ -1.59
CHD1-211ENST00000514344 KANK4Q5T7N3 995 aaPredicted RBP5.14□□□□□ -1.59
CHD1-211ENST00000514344 PELP1Q8IZL8 1130 aaKnown RBP5.14□□□□□ -1.59
CHD1-211ENST00000514344 MYOM1P52179 1685 aa5.14□□□□□ -1.59
CHD1-211ENST00000514344 NWD2Q9ULI1 1742 aa5.14□□□□□ -1.59
CHD1-211ENST00000514344 DAPK1P53355 1430 aa5.13□□□□□ -1.59
CHD1-211ENST00000514344 LRPPRCP42704 1394 aaKnown RBP5.13□□□□□ -1.59
CHD1-211ENST00000514344 PARD3Q8TEW0 1356 aa5.13□□□□□ -1.59
CHD1-211ENST00000514344 GPR162Q16538 588 aa5.13□□□□□ -1.59
CHD1-211ENST00000514344 PPP4R3CPQ6ZMV5 832 aa5.13□□□□□ -1.59
CHD1-211ENST00000514344 KRT28Q7Z3Y7 464 aa5.13□□□□□ -1.59
CHD1-211ENST00000514344 RREB1Q92766 1687 aa5.13□□□□□ -1.59
CHD1-211ENST00000514344 ANO8Q9HCE9 1232 aaPredicted RBP5.13□□□□□ -1.59
CHD1-211ENST00000514344 PTGER2P43116 358 aa5.13□□□□□ -1.59
CHD1-211ENST00000514344 E9PCH4 1651 aa5.12□□□□□ -1.59
CHD1-211ENST00000514344 KLHL34Q8N239 644 aa5.12□□□□□ -1.59
CHD1-211ENST00000514344 NCBP3Q53F19 620 aaKnown RBP5.12□□□□□ -1.59
CHD1-211ENST00000514344 SPATA31A5Q5VU36 1347 aa5.11□□□□□ -1.59
CHD1-211ENST00000514344 SPATA31A7Q8IWB4 1347 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms