RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 ARID3AQ99856 593 aa8.43□□□□□ -1.06
NIPBL-207ENST00000513819 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.43□□□□□ -1.06
NIPBL-207ENST00000513819 USP17L8P0C7I0 530 aa8.42□□□□□ -1.06
NIPBL-207ENST00000513819 ATP6V1AP38606 617 aa8.42□□□□□ -1.06
NIPBL-207ENST00000513819 MTMR2Q13614 643 aa8.42□□□□□ -1.06
NIPBL-207ENST00000513819 KMT5BQ4FZB7 885 aa8.42□□□□□ -1.06
NIPBL-207ENST00000513819 GRIPAP1Q4V328 841 aa8.42□□□□□ -1.06
NIPBL-207ENST00000513819 GOLGA8CPA6NN73 597 aa8.41□□□□□ -1.06
NIPBL-207ENST00000513819 C6orf229H3BNL8 230 aa8.41□□□□□ -1.06
NIPBL-207ENST00000513819 PUS10Q3MIT2 529 aaKnown RBP8.41□□□□□ -1.06
NIPBL-207ENST00000513819 SYMPKQ92797 1274 aaKnown RBP8.41□□□□□ -1.06
NIPBL-207ENST00000513819 STAC3Q96MF2 364 aa8.41□□□□□ -1.06
NIPBL-207ENST00000513819 HOMEZQ8IX15 550 aa8.4□□□□□ -1.06
NIPBL-207ENST00000513819 FNBP4Q8N3X1 1017 aaPredicted RBP8.4□□□□□ -1.06
NIPBL-207ENST00000513819 ANKK1Q8NFD2 765 aa8.4□□□□□ -1.06
NIPBL-207ENST00000513819 TSC1Q92574 1164 aa8.4□□□□□ -1.06
NIPBL-207ENST00000513819 CFAP99D6REC4 459 aa8.39□□□□□ -1.07
NIPBL-207ENST00000513819 ACTN4O43707 911 aaKnown RBP8.39□□□□□ -1.07
NIPBL-207ENST00000513819 BCAMP50895 628 aa8.39□□□□□ -1.07
NIPBL-207ENST00000513819 CTDSPL2Q05D32 466 aa8.39□□□□□ -1.07
NIPBL-207ENST00000513819 GDPD2Q9HCC8 539 aa8.39□□□□□ -1.07
NIPBL-207ENST00000513819 ZNF777Q9ULD5 760 aaPredicted RBP8.39□□□□□ -1.07
NIPBL-207ENST00000513819 NECTIN2Q92692 538 aa8.38□□□□□ -1.07
NIPBL-207ENST00000513819 HPS5Q9UPZ3 1129 aa8.38□□□□□ -1.07
NIPBL-207ENST00000513819 SOWAHBA6NEL2 793 aa8.37□□□□□ -1.07
NIPBL-207ENST00000513819 PPP4CP60510 307 aa8.37□□□□□ -1.07
NIPBL-207ENST00000513819 MORN1Q5T089 497 aa8.37□□□□□ -1.07
NIPBL-207ENST00000513819 TBC1D2BQ9UPU7 963 aa8.37□□□□□ -1.07
NIPBL-207ENST00000513819 SLC27A5Q9Y2P5 690 aa8.37□□□□□ -1.07
NIPBL-207ENST00000513819 ABL2P42684 1182 aa8.36□□□□□ -1.07
NIPBL-207ENST00000513819 HELBQ8NG08 1087 aaPredicted RBP8.36□□□□□ -1.07
NIPBL-207ENST00000513819 PRR7Q8TB68 274 aa8.36□□□□□ -1.07
NIPBL-207ENST00000513819 WNT2BQ93097 391 aa8.36□□□□□ -1.07
NIPBL-207ENST00000513819 HMX1Q9NP08 348 aaPredicted RBP8.36□□□□□ -1.07
NIPBL-207ENST00000513819 SOCS7O14512 581 aa8.35□□□□□ -1.07
NIPBL-207ENST00000513819 APLP1P51693 650 aa8.35□□□□□ -1.07
NIPBL-207ENST00000513819 CCDC82Q8N4S0 544 aa8.35□□□□□ -1.07
NIPBL-207ENST00000513819 LRRN4Q8WUT4 740 aa8.35□□□□□ -1.07
NIPBL-207ENST00000513819 GJD4Q96KN9 370 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-207ENST00000513819 ZNF330Q9Y3S2 320 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-207ENST00000513819 PRR14Q9BWN1 585 aa8.34□□□□□ -1.07
NIPBL-207ENST00000513819 PRM3Q9NNZ6 103 aa8.34□□□□□ -1.07
NIPBL-207ENST00000513819 TSR3Q9UJK0 312 aaKnown RBP8.34□□□□□ -1.07
NIPBL-207ENST00000513819 BLOC1S3Q6QNY0 202 aa8.33□□□□□ -1.08
NIPBL-207ENST00000513819 RNF19BQ6ZMZ0 732 aa8.33□□□□□ -1.08
NIPBL-207ENST00000513819 KRTAP3-3Q9BYR6 98 aa8.33□□□□□ -1.08
NIPBL-207ENST00000513819 KRTAP3-2Q9BYR7 98 aa8.33□□□□□ -1.08
NIPBL-207ENST00000513819 Q3C1V9 767 aa8.32□□□□□ -1.08
NIPBL-207ENST00000513819 RETREG3Q86VR2 466 aa8.32□□□□□ -1.08
NIPBL-207ENST00000513819 TRIM34Q9BYJ4 488 aa8.32□□□□□ -1.08
NIPBL-207ENST00000513819 PER1O15534 1290 aaPredicted RBP8.31□□□□□ -1.08
NIPBL-207ENST00000513819 EPS8L1Q8TE68 723 aa8.31□□□□□ -1.08
NIPBL-207ENST00000513819 WBP1LQ9NX94 342 aa8.31□□□□□ -1.08
NIPBL-207ENST00000513819 PCDHB3Q9Y5E6 796 aa8.31□□□□□ -1.08
NIPBL-207ENST00000513819 NDUFB9Q9Y6M9 179 aa8.31□□□□□ -1.08
NIPBL-207ENST00000513819 WWC1Q8IX03 1113 aa8.3□□□□□ -1.08
NIPBL-207ENST00000513819 SCUBE3Q8IX30 993 aa8.3□□□□□ -1.08
NIPBL-207ENST00000513819 POM121CA8CG34 1229 aa8.29□□□□□ -1.08
NIPBL-207ENST00000513819 BRICD5Q6PL45 260 aa8.29□□□□□ -1.08
NIPBL-207ENST00000513819 GPR37L1O60883 481 aa8.28□□□□□ -1.08
NIPBL-207ENST00000513819 IRF5Q13568 498 aa8.28□□□□□ -1.08
NIPBL-207ENST00000513819 NR6A1Q15406 480 aa8.28□□□□□ -1.08
NIPBL-207ENST00000513819 USB1Q9BQ65 265 aaKnown RBP8.28□□□□□ -1.08
NIPBL-207ENST00000513819 NR1I2O75469 434 aa8.27□□□□□ -1.09
NIPBL-207ENST00000513819 THSD4Q6ZMP0 1018 aa8.27□□□□□ -1.09
NIPBL-207ENST00000513819 KCTD12Q96CX2 325 aaKnown RBP8.27□□□□□ -1.09
NIPBL-207ENST00000513819 THAP11Q96EK4 314 aa8.27□□□□□ -1.09
NIPBL-207ENST00000513819 FMNL1O95466 1100 aaPredicted RBP8.26□□□□□ -1.09
NIPBL-207ENST00000513819 DESI1Q6ICB0 168 aa8.26□□□□□ -1.09
NIPBL-207ENST00000513819 CCDC97Q96F63 343 aaPredicted RBP8.26□□□□□ -1.09
NIPBL-207ENST00000513819 SALL2Q9Y467 1007 aaPredicted RBP8.26□□□□□ -1.09
NIPBL-207ENST00000513819 COPS2P61201 443 aa8.25□□□□□ -1.09
NIPBL-207ENST00000513819 LYPD8Q6UX82 237 aa8.25□□□□□ -1.09
NIPBL-207ENST00000513819 SERPINA10Q9UK55 444 aa8.25□□□□□ -1.09
NIPBL-207ENST00000513819 VAC14Q08AM6 782 aa8.24□□□□□ -1.09
NIPBL-207ENST00000513819 GLMNQ92990 594 aa8.23□□□□□ -1.09
NIPBL-207ENST00000513819 CALR3Q96L12 384 aaKnown RBP8.23□□□□□ -1.09
NIPBL-207ENST00000513819 JUNDP17535 347 aa8.22□□□□□ -1.09
NIPBL-207ENST00000513819 WASHC4Q2M389 1173 aa8.22□□□□□ -1.09
NIPBL-207ENST00000513819 PTPN5P54829 565 aa8.21□□□□□ -1.1
NIPBL-207ENST00000513819 ADAMTS19Q8TE59 1207 aa8.21□□□□□ -1.1
NIPBL-207ENST00000513819 SPSB2Q99619 263 aa8.21□□□□□ -1.1
NIPBL-207ENST00000513819 TLL1O43897 1013 aa8.2□□□□□ -1.1
NIPBL-207ENST00000513819 HDGFL1Q5TGJ6 251 aa8.2□□□□□ -1.1
NIPBL-207ENST00000513819 FAM160A2Q8N612 972 aaPredicted RBP8.2□□□□□ -1.1
NIPBL-207ENST00000513819 PRDM9Q9NQV7 894 aa8.2□□□□□ -1.1
NIPBL-207ENST00000513819 MAP10Q9P2G4 905 aa8.2□□□□□ -1.1
NIPBL-207ENST00000513819 F12P00748 615 aaPredicted RBP8.19□□□□□ -1.1
NIPBL-207ENST00000513819 MSS51Q4VC12 460 aa8.19□□□□□ -1.1
NIPBL-207ENST00000513819 CTHP32929 405 aa8.18□□□□□ -1.1
NIPBL-207ENST00000513819 PTPRNQ16849 979 aa8.18□□□□□ -1.1
NIPBL-207ENST00000513819 MTRQ99707 1265 aa8.18□□□□□ -1.1
NIPBL-207ENST00000513819 ZPR1O75312 459 aa8.17□□□□□ -1.1
NIPBL-207ENST00000513819 DXOO77932 396 aaKnown RBP8.17□□□□□ -1.1
NIPBL-207ENST00000513819 NYAP1Q6ZVC0 841 aa8.17□□□□□ -1.1
NIPBL-207ENST00000513819 PNMA1Q8ND90 353 aa8.16□□□□□ -1.1
NIPBL-207ENST00000513819 ZNF516Q92618 1163 aa8.16□□□□□ -1.1
NIPBL-207ENST00000513819 FKBPLQ9UIM3 349 aa8.16□□□□□ -1.1
NIPBL-207ENST00000513819 ADH1BP00325 375 aa8.15□□□□□ -1.1
NIPBL-207ENST00000513819 CCNYL3P0C7X3 344 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms