RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 CAMSAP1Q5T5Y3 1602 aa13.79□□□□□ -0.2
TPM3-221ENST00000513769 POTEFA5A3E0 1075 aa13.79□□□□□ -0.2
TPM3-221ENST00000513769 CEBPAP49715 358 aaPredicted RBP13.79□□□□□ -0.2
TPM3-221ENST00000513769 ZNF326Q5BKZ1 582 aaKnown RBP13.79□□□□□ -0.2
TPM3-221ENST00000513769 KIF1BO60333 1816 aa13.78□□□□□ -0.2
TPM3-221ENST00000513769 CLTCL1P53675 1640 aa13.78□□□□□ -0.2
TPM3-221ENST00000513769 ROCK2O75116 1388 aaKnown RBP13.77□□□□□ -0.21
TPM3-221ENST00000513769 ZFYVE9O95405 1425 aa13.77□□□□□ -0.21
TPM3-221ENST00000513769 POTEJP0CG39 1038 aa13.77□□□□□ -0.21
TPM3-221ENST00000513769 FER1L4A9Z1Z3 1794 aa13.76□□□□□ -0.21
TPM3-221ENST00000513769 SIGLEC1Q9BZZ2 1709 aa13.76□□□□□ -0.21
TPM3-221ENST00000513769 MYOM2P54296 1465 aa13.75□□□□□ -0.21
TPM3-221ENST00000513769 CHGAP10645 457 aaKnown RBP13.75□□□□□ -0.21
TPM3-221ENST00000513769 C14orf93Q9H972 538 aaKnown RBP13.75□□□□□ -0.21
TPM3-221ENST00000513769 USP47Q96K76 1375 aa13.74□□□□□ -0.21
TPM3-221ENST00000513769 SEC24BO95487 1268 aa13.74□□□□□ -0.21
TPM3-221ENST00000513769 DDX10Q13206 875 aaKnown RBP13.74□□□□□ -0.21
TPM3-221ENST00000513769 NBPF1Q3BBV0 1214 aa13.74□□□□□ -0.21
TPM3-221ENST00000513769 IER5LQ5T953 404 aa13.74□□□□□ -0.21
TPM3-221ENST00000513769 FBXO31Q5XUX0 539 aaPredicted RBP13.74□□□□□ -0.21
TPM3-221ENST00000513769 HIRIP3Q9BW71 556 aaPredicted RBP13.74□□□□□ -0.21
TPM3-221ENST00000513769 CIZ1Q9ULV3 898 aaPredicted RBP13.74□□□□□ -0.21
TPM3-221ENST00000513769 COLQQ9Y215 455 aaPredicted RBP13.74□□□□□ -0.21
TPM3-221ENST00000513769 PIK3C2BO00750 1634 aa13.74□□□□□ -0.21
TPM3-221ENST00000513769 CFAP65Q6ZU64 1925 aaKnown RBP13.72□□□□□ -0.21
TPM3-221ENST00000513769 ST20-MTHFSA0A0A6YYL1 179 aa13.72□□□□□ -0.21
TPM3-221ENST00000513769 CHRM1P11229 460 aaPredicted RBP13.72□□□□□ -0.21
TPM3-221ENST00000513769 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.72□□□□□ -0.21
TPM3-221ENST00000513769 NRXN1Q9ULB1 1477 aa13.72□□□□□ -0.21
TPM3-221ENST00000513769 LAMC1P11047 1609 aa13.72□□□□□ -0.21
TPM3-221ENST00000513769 WASHC2AQ641Q2 1341 aa13.71□□□□□ -0.21
TPM3-221ENST00000513769 ADGRB3O60242 1522 aa13.71□□□□□ -0.21
TPM3-221ENST00000513769 KIAA1210Q9ULL0 1709 aa13.71□□□□□ -0.21
TPM3-221ENST00000513769 CDCA8Q53HL2 280 aa13.71□□□□□ -0.21
TPM3-221ENST00000513769 ZNF467Q7Z7K2 595 aaPredicted RBP13.71□□□□□ -0.21
TPM3-221ENST00000513769 ERVK-7P63135 1459 aa13.71□□□□□ -0.21
TPM3-221ENST00000513769 TRPM1Q7Z4N2 1603 aa13.71□□□□□ -0.22
TPM3-221ENST00000513769 SPATA31D1Q6ZQQ2 1576 aa13.71□□□□□ -0.22
TPM3-221ENST00000513769 DISP3Q9P2K9 1392 aa13.71□□□□□ -0.22
TPM3-221ENST00000513769 PREX1Q8TCU6 1659 aa13.7□□□□□ -0.22
TPM3-221ENST00000513769 MAMSTRQ6ZN01 415 aa13.7□□□□□ -0.22
TPM3-221ENST00000513769 ADGRF5Q8IZF2 1346 aa13.69□□□□□ -0.22
TPM3-221ENST00000513769 SYNMO15061 1565 aa13.69□□□□□ -0.22
TPM3-221ENST00000513769 CCDC7Q96M83 1385 aa13.69□□□□□ -0.22
TPM3-221ENST00000513769 C11orf95C9JLR9 678 aaPredicted RBP13.68□□□□□ -0.22
TPM3-221ENST00000513769 CFAP70Q5T0N1 1121 aa13.68□□□□□ -0.22
TPM3-221ENST00000513769 CLTCQ00610 1675 aaKnown RBP13.68□□□□□ -0.22
TPM3-221ENST00000513769 MROH2AA6NES4 1674 aa13.67□□□□□ -0.22
TPM3-221ENST00000513769 TMF1P82094 1093 aa13.67□□□□□ -0.22
TPM3-221ENST00000513769 UGGT1Q9NYU2 1555 aa13.66□□□□□ -0.22
TPM3-221ENST00000513769 ANP32CO43423 234 aa13.66□□□□□ -0.22
TPM3-221ENST00000513769 PUS7Q96PZ0 661 aaKnown RBP13.66□□□□□ -0.22
TPM3-221ENST00000513769 EIF3AQ14152 1382 aaKnown RBP13.66□□□□□ -0.22
TPM3-221ENST00000513769 SCAF11Q99590 1463 aaKnown RBP13.66□□□□□ -0.22
TPM3-221ENST00000513769 KIF7Q2M1P5 1343 aa13.65□□□□□ -0.22
TPM3-221ENST00000513769 TMEM131LA2VDJ0 1609 aa13.65□□□□□ -0.22
TPM3-221ENST00000513769 ILDR2Q71H61 639 aa13.65□□□□□ -0.22
TPM3-221ENST00000513769 TESK2Q96S53 571 aa13.65□□□□□ -0.22
TPM3-221ENST00000513769 SCUBE2Q9NQ36 999 aa13.65□□□□□ -0.22
TPM3-221ENST00000513769 SETD1BQ9UPS6 1966 aaKnown RBP13.65□□□□□ -0.22
TPM3-221ENST00000513769 PIK3C2GO75747 1445 aa13.64□□□□□ -0.23
TPM3-221ENST00000513769 IFT172Q9UG01 1749 aa13.64□□□□□ -0.23
TPM3-221ENST00000513769 SETBP1Q9Y6X0 1596 aa13.64□□□□□ -0.23
TPM3-221ENST00000513769 TNRQ92752 1358 aa13.64□□□□□ -0.23
TPM3-221ENST00000513769 CCER2I3L3R5 266 aa13.64□□□□□ -0.23
TPM3-221ENST00000513769 THEMISQ8N1K5 641 aaPredicted RBP13.64□□□□□ -0.23
TPM3-221ENST00000513769 STRCQ7RTU9 1775 aa13.63□□□□□ -0.23
TPM3-221ENST00000513769 KDM5AP29375 1690 aaKnown RBP13.63□□□□□ -0.23
TPM3-221ENST00000513769 NLRP1Q9C000 1473 aa13.63□□□□□ -0.23
TPM3-221ENST00000513769 SOCS7O14512 581 aa13.63□□□□□ -0.23
TPM3-221ENST00000513769 PPLO60437 1756 aa13.63□□□□□ -0.23
TPM3-221ENST00000513769 PLCG2P16885 1265 aa13.62□□□□□ -0.23
TPM3-221ENST00000513769 SIRT1Q96EB6 747 aa13.62□□□□□ -0.23
TPM3-221ENST00000513769 A2ML1A8K2U0 1454 aa13.61□□□□□ -0.23
TPM3-221ENST00000513769 NEXMIFQ5QGS0 1516 aa13.61□□□□□ -0.23
TPM3-221ENST00000513769 SBNO2Q9Y2G9 1366 aa13.6□□□□□ -0.23
TPM3-221ENST00000513769 POLR1AO95602 1720 aaPredicted RBP13.6□□□□□ -0.23
TPM3-221ENST00000513769 IRX5P78411 483 aaPredicted RBP13.6□□□□□ -0.23
TPM3-221ENST00000513769 PSEN1P49768 467 aa13.59□□□□□ -0.23
TPM3-221ENST00000513769 EID1Q9Y6B2 187 aa13.58□□□□□ -0.24
TPM3-221ENST00000513769 RIMS2Q9UQ26 1411 aa13.57□□□□□ -0.24
TPM3-221ENST00000513769 C3P01024 1663 aa13.57□□□□□ -0.24
TPM3-221ENST00000513769 KTN1Q86UP2 1357 aaKnown RBP13.57□□□□□ -0.24
TPM3-221ENST00000513769 TMEM2Q9UHN6 1383 aa13.57□□□□□ -0.24
TPM3-221ENST00000513769 CENPJQ9HC77 1338 aaPredicted RBP13.56□□□□□ -0.24
TPM3-221ENST00000513769 PDAP1Q13442 181 aaKnown RBP13.55□□□□□ -0.24
TPM3-221ENST00000513769 IQGAP1P46940 1657 aa13.54□□□□□ -0.24
TPM3-221ENST00000513769 GOLGA2Q08379 1002 aa13.54□□□□□ -0.24
TPM3-221ENST00000513769 TMEM132EQ6IEE7 984 aa13.54□□□□□ -0.24
TPM3-221ENST00000513769 TXNDC2Q86VQ3 553 aa13.54□□□□□ -0.24
TPM3-221ENST00000513769 OCEL1Q9H607 264 aa13.54□□□□□ -0.24
TPM3-221ENST00000513769 TRAK1Q9UPV9 953 aa13.54□□□□□ -0.24
TPM3-221ENST00000513769 PER1O15534 1290 aaPredicted RBP13.53□□□□□ -0.24
TPM3-221ENST00000513769 NUTM2DQ5VT03 806 aaPredicted RBP13.53□□□□□ -0.24
TPM3-221ENST00000513769 PRKRIP1Q9H875 184 aaPredicted RBP13.53□□□□□ -0.24
TPM3-221ENST00000513769 NCKAP5LQ9HCH0 1330 aa13.53□□□□□ -0.24
TPM3-221ENST00000513769 ABCC11Q96J66 1382 aa13.53□□□□□ -0.24
TPM3-221ENST00000513769 ADGRB1O14514 1584 aa13.53□□□□□ -0.24
TPM3-221ENST00000513769 LTBP4Q8N2S1 1624 aa13.53□□□□□ -0.24
TPM3-221ENST00000513769 RALBP1Q15311 655 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms