RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 VAC14Q08AM6 782 aa12.53□□□□□ -0.4
RFC1-214ENST00000512726 CFAP70Q5T0N1 1121 aa12.53□□□□□ -0.4
RFC1-214ENST00000512726 PPP1R12CQ9BZL4 782 aa12.53□□□□□ -0.4
RFC1-214ENST00000512726 POTEJP0CG39 1038 aa12.52□□□□□ -0.41
RFC1-214ENST00000512726 MAMSTRQ6ZN01 415 aa12.52□□□□□ -0.41
RFC1-214ENST00000512726 HLA-CQ95604 372 aa12.52□□□□□ -0.41
RFC1-214ENST00000512726 C6orf229H3BNL8 230 aa12.51□□□□□ -0.41
RFC1-214ENST00000512726 SNPHO15079 494 aa12.51□□□□□ -0.41
RFC1-214ENST00000512726 GPR37L1O60883 481 aa12.51□□□□□ -0.41
RFC1-214ENST00000512726 HOXB1P14653 301 aaPredicted RBP12.51□□□□□ -0.41
RFC1-214ENST00000512726 LRRN4Q8WUT4 740 aa12.51□□□□□ -0.41
RFC1-214ENST00000512726 ZBED2Q9BTP6 218 aa12.51□□□□□ -0.41
RFC1-214ENST00000512726 BRD1O95696 1058 aa12.5□□□□□ -0.41
RFC1-214ENST00000512726 SOX11P35716 441 aa12.5□□□□□ -0.41
RFC1-214ENST00000512726 KCNA1Q09470 495 aa12.5□□□□□ -0.41
RFC1-214ENST00000512726 ALG2Q9H553 416 aa12.5□□□□□ -0.41
RFC1-214ENST00000512726 MFAP1P55081 439 aaKnown RBP12.49□□□□□ -0.41
RFC1-214ENST00000512726 CFAP99D6REC4 459 aa12.48□□□□□ -0.41
RFC1-214ENST00000512726 RGS22Q8NE09 1264 aa12.48□□□□□ -0.41
RFC1-214ENST00000512726 RABGEF1Q9UJ41 708 aa12.48□□□□□ -0.41
RFC1-214ENST00000512726 PALM3A6NDB9 673 aaPredicted RBP12.47□□□□□ -0.41
RFC1-214ENST00000512726 SRPK2P78362 688 aaKnown RBP12.47□□□□□ -0.41
RFC1-214ENST00000512726 SLF2Q8IX21 1173 aa12.47□□□□□ -0.41
RFC1-214ENST00000512726 FUT2Q10981 343 aa12.46□□□□□ -0.41
RFC1-214ENST00000512726 PNMA1Q8ND90 353 aa12.46□□□□□ -0.41
RFC1-214ENST00000512726 LMOD1P29536 600 aaPredicted RBP12.45□□□□□ -0.42
RFC1-214ENST00000512726 SEMA3FQ13275 785 aa12.44□□□□□ -0.42
RFC1-214ENST00000512726 SEPT9Q9UHD8 586 aaPredicted RBP12.44□□□□□ -0.42
RFC1-214ENST00000512726 MTMR7Q9Y216 660 aa12.44□□□□□ -0.42
RFC1-214ENST00000512726 CFHP08603 1231 aa12.43□□□□□ -0.42
RFC1-214ENST00000512726 ATP6V1AP38606 617 aa12.43□□□□□ -0.42
RFC1-214ENST00000512726 EPS8L1Q8TE68 723 aa12.43□□□□□ -0.42
RFC1-214ENST00000512726 TFIP11Q9UBB9 837 aaKnown RBP12.43□□□□□ -0.42
RFC1-214ENST00000512726 FAM98CQ17RN3 349 aaKnown RBP12.42□□□□□ -0.42
RFC1-214ENST00000512726 PRR7Q8TB68 274 aa12.42□□□□□ -0.42
RFC1-214ENST00000512726 SLC4A5Q9BY07 1137 aa12.42□□□□□ -0.42
RFC1-214ENST00000512726 POTEB2H3BUK9 544 aa12.41□□□□□ -0.42
RFC1-214ENST00000512726 NR6A1Q15406 480 aa12.41□□□□□ -0.42
RFC1-214ENST00000512726 PSEN2P49810 448 aa12.4□□□□□ -0.42
RFC1-214ENST00000512726 UCN2Q96RP3 112 aa12.4□□□□□ -0.42
RFC1-214ENST00000512726 ATG7O95352 703 aa12.39□□□□□ -0.43
RFC1-214ENST00000512726 EIF4G2P78344 907 aaKnown RBP eCLIP12.39□□□□□ -0.43
RFC1-214ENST00000512726 SYMPKQ92797 1274 aaKnown RBP12.39□□□□□ -0.43
RFC1-214ENST00000512726 ARHGAP33O14559 1287 aa12.38□□□□□ -0.43
RFC1-214ENST00000512726 RETREG3Q86VR2 466 aa12.38□□□□□ -0.43
RFC1-214ENST00000512726 KMT5BQ4FZB7 885 aa12.37□□□□□ -0.43
RFC1-214ENST00000512726 SAMD7Q7Z3H4 446 aa12.37□□□□□ -0.43
RFC1-214ENST00000512726 MAFBQ9Y5Q3 323 aaPredicted RBP12.37□□□□□ -0.43
RFC1-214ENST00000512726 DESI1Q6ICB0 168 aa12.36□□□□□ -0.43
RFC1-214ENST00000512726 VRTNQ9H8Y1 702 aa12.36□□□□□ -0.43
RFC1-214ENST00000512726 RNF40O75150 1001 aa12.35□□□□□ -0.43
RFC1-214ENST00000512726 Q3C1V9 767 aa12.35□□□□□ -0.43
RFC1-214ENST00000512726 PER1O15534 1290 aaPredicted RBP12.34□□□□□ -0.43
RFC1-214ENST00000512726 CDCA8Q53HL2 280 aa12.34□□□□□ -0.43
RFC1-214ENST00000512726 LAPTM4BQ86VI4 370 aa12.34□□□□□ -0.43
RFC1-214ENST00000512726 ATP9BO43861 1147 aa12.33□□□□□ -0.44
RFC1-214ENST00000512726 CARNS1A5YM72 827 aa12.32□□□□□ -0.44
RFC1-214ENST00000512726 TBC1D9Q6ZT07 1266 aa12.32□□□□□ -0.44
RFC1-214ENST00000512726 NR1H3Q13133 447 aa12.31□□□□□ -0.44
RFC1-214ENST00000512726 FOXD4L5Q5VV16 416 aaPredicted RBP12.31□□□□□ -0.44
RFC1-214ENST00000512726 FOXD4L4Q8WXT5 416 aaPredicted RBP12.31□□□□□ -0.44
RFC1-214ENST00000512726 NBPF3Q9H094 633 aa12.31□□□□□ -0.44
RFC1-214ENST00000512726 TMEM88BA6NKF7 163 aa12.3□□□□□ -0.44
RFC1-214ENST00000512726 MORN1Q5T089 497 aa12.3□□□□□ -0.44
RFC1-214ENST00000512726 B4GALNT3Q6L9W6 998 aa12.3□□□□□ -0.44
RFC1-214ENST00000512726 LYPD8Q6UX82 237 aa12.3□□□□□ -0.44
RFC1-214ENST00000512726 IVNS1ABPQ9Y6Y0 642 aa12.3□□□□□ -0.44
RFC1-214ENST00000512726 DMRTA1Q5VZB9 504 aa12.29□□□□□ -0.44
RFC1-214ENST00000512726 VPS9D1Q9Y2B5 631 aa12.28□□□□□ -0.44
RFC1-214ENST00000512726 SLC27A5Q9Y2P5 690 aa12.28□□□□□ -0.44
RFC1-214ENST00000512726 ACTN4O43707 911 aaKnown RBP12.27□□□□□ -0.45
RFC1-214ENST00000512726 PBX2P40425 430 aa12.27□□□□□ -0.45
RFC1-214ENST00000512726 RBM25P49756 843 aaKnown RBP12.27□□□□□ -0.45
RFC1-214ENST00000512726 CCDC27Q2M243 656 aa12.27□□□□□ -0.45
RFC1-214ENST00000512726 ERBB3P21860 1342 aa12.27□□□□□ -0.45
RFC1-214ENST00000512726 ZBBXA8MT70 800 aa12.26□□□□□ -0.45
RFC1-214ENST00000512726 PUS10Q3MIT2 529 aaKnown RBP12.26□□□□□ -0.45
RFC1-214ENST00000512726 SND1Q7KZF4 910 aaKnown RBP eCLIP12.26□□□□□ -0.45
RFC1-214ENST00000512726 PRR14Q9BWN1 585 aa12.26□□□□□ -0.45
RFC1-214ENST00000512726 FBXO45P0C2W1 286 aa12.25□□□□□ -0.45
RFC1-214ENST00000512726 VARS2Q5ST30 1063 aaKnown RBP12.25□□□□□ -0.45
RFC1-214ENST00000512726 NFATC2IPQ8NCF5 419 aa12.25□□□□□ -0.45
RFC1-214ENST00000512726 AXIN2Q9Y2T1 843 aa12.25□□□□□ -0.45
RFC1-214ENST00000512726 ELOAQ14241 798 aaKnown RBP12.24□□□□□ -0.45
RFC1-214ENST00000512726 POTEEQ6S8J3 1075 aa12.24□□□□□ -0.45
RFC1-214ENST00000512726 ZFRQ96KR1 1074 aaKnown RBP12.24□□□□□ -0.45
RFC1-214ENST00000512726 FKBPLQ9UIM3 349 aa12.24□□□□□ -0.45
RFC1-214ENST00000512726 KANK4Q5T7N3 995 aaPredicted RBP12.23□□□□□ -0.45
RFC1-214ENST00000512726 USB1Q9BQ65 265 aaKnown RBP12.23□□□□□ -0.45
RFC1-214ENST00000512726 ZC3H4Q9UPT8 1303 aaKnown RBP12.22□□□□□ -0.45
RFC1-214ENST00000512726 LRCH3Q96II8 777 aa12.21□□□□□ -0.45
RFC1-214ENST00000512726 GNEQ9Y223 722 aaKnown RBP12.21□□□□□ -0.45
RFC1-214ENST00000512726 ZNF592Q92610 1267 aa12.2□□□□□ -0.46
RFC1-214ENST00000512726 SALL2Q9Y467 1007 aaPredicted RBP12.2□□□□□ -0.46
RFC1-214ENST00000512726 BHMG1C9JSJ3 638 aaPredicted RBP12.19□□□□□ -0.46
RFC1-214ENST00000512726 SKIP12755 728 aa12.19□□□□□ -0.46
RFC1-214ENST00000512726 MRPL50Q8N5N7 158 aaKnown RBP12.19□□□□□ -0.46
RFC1-214ENST00000512726 AMOTL2Q9Y2J4 779 aa12.19□□□□□ -0.46
RFC1-214ENST00000512726 USP17L3A6NCW0 530 aa12.18□□□□□ -0.46
RFC1-214ENST00000512726 USP17L4A6NCW7 530 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms