RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 SENP3Q9H4L4 574 aaPredicted RBP33.08■■■□□ 2.89
SPOCK3-221ENST00000512648 PLPPR3Q6T4P5 718 aa33.07■■■□□ 2.88
SPOCK3-221ENST00000512648 ATAD2Q6PL18 1390 aa33.06■■■□□ 2.88
SPOCK3-221ENST00000512648 SETD1BQ9UPS6 1966 aaKnown RBP33.06■■■□□ 2.88
SPOCK3-221ENST00000512648 ZNF142P52746 1687 aaPredicted RBP33.06■■■□□ 2.88
SPOCK3-221ENST00000512648 NLRP13Q86W25 1043 aa33.05■■■□□ 2.88
SPOCK3-221ENST00000512648 BCANQ96GW7 911 aa33.05■■■□□ 2.88
SPOCK3-221ENST00000512648 DIP2AQ14689 1571 aa33.05■■■□□ 2.88
SPOCK3-221ENST00000512648 CPS1P31327 1500 aa33.05■■■□□ 2.88
SPOCK3-221ENST00000512648 CARD14Q9BXL6 1004 aa33.03■■■□□ 2.88
SPOCK3-221ENST00000512648 SAFB2Q14151 953 aaKnown RBP eCLIP33.01■■■□□ 2.88
SPOCK3-221ENST00000512648 SLC12A5Q9H2X9 1139 aa33.01■■■□□ 2.88
SPOCK3-221ENST00000512648 MINK1Q8N4C8 1332 aaPredicted RBP33.01■■■□□ 2.87
SPOCK3-221ENST00000512648 CC2D1BQ5T0F9 858 aaKnown RBP32.99■■■□□ 2.87
SPOCK3-221ENST00000512648 WAPLQ7Z5K2 1190 aa32.99■■■□□ 2.87
SPOCK3-221ENST00000512648 TMC1Q8TDI8 760 aa32.99■■■□□ 2.87
SPOCK3-221ENST00000512648 CABP2Q9NPB3 220 aa32.99■■■□□ 2.87
SPOCK3-221ENST00000512648 ANKRD36BQ8N2N9 1353 aa32.98■■■□□ 2.87
SPOCK3-221ENST00000512648 PNISRQ8TF01 805 aaKnown RBP32.98■■■□□ 2.87
SPOCK3-221ENST00000512648 PIK3R4Q99570 1358 aa32.98■■■□□ 2.87
SPOCK3-221ENST00000512648 PLEKHH1Q9ULM0 1364 aa32.98■■■□□ 2.87
SPOCK3-221ENST00000512648 CDK19Q9BWU1 502 aa32.97■■■□□ 2.87
SPOCK3-221ENST00000512648 SRPK2P78362 688 aaKnown RBP32.96■■■□□ 2.87
SPOCK3-221ENST00000512648 ANKLE2Q86XL3 938 aa32.96■■■□□ 2.87
SPOCK3-221ENST00000512648 CNGB1Q14028 1251 aaPredicted RBP32.94■■■□□ 2.86
SPOCK3-221ENST00000512648 SLC26A8Q96RN1 970 aa32.92■■■□□ 2.86
SPOCK3-221ENST00000512648 USP32Q8NFA0 1604 aa32.91■■■□□ 2.86
SPOCK3-221ENST00000512648 ROBO2Q9HCK4 1378 aa32.91■■■□□ 2.86
SPOCK3-221ENST00000512648 PTPRUQ92729 1446 aa32.91■■■□□ 2.86
SPOCK3-221ENST00000512648 WASLO00401 505 aaPredicted RBP32.91■■■□□ 2.86
SPOCK3-221ENST00000512648 FAM9BQ8IZU0 186 aa32.9■■■□□ 2.86
SPOCK3-221ENST00000512648 PTCH1Q13635 1447 aa32.89■■■□□ 2.86
SPOCK3-221ENST00000512648 NSD3Q9BZ95 1437 aa32.89■■■□□ 2.86
SPOCK3-221ENST00000512648 INSRP06213 1382 aa32.88■■■□□ 2.85
SPOCK3-221ENST00000512648 TERF2IPQ9NYB0 399 aa32.87■■■□□ 2.85
SPOCK3-221ENST00000512648 AMOTL2Q9Y2J4 779 aa32.86■■■□□ 2.85
SPOCK3-221ENST00000512648 NSD2O96028 1365 aa32.86■■■□□ 2.85
SPOCK3-221ENST00000512648 PPP2R1AP30153 589 aa32.86■■■□□ 2.85
SPOCK3-221ENST00000512648 CGNL1Q0VF96 1302 aa32.84■■■□□ 2.85
SPOCK3-221ENST00000512648 ADGRB2O60241 1585 aa32.83■■■□□ 2.85
SPOCK3-221ENST00000512648 HNRNPUQ00839 825 aaKnown RBP eCLIP32.83■■■□□ 2.85
SPOCK3-221ENST00000512648 CD163L1Q9NR16 1453 aa32.81■■■□□ 2.84
SPOCK3-221ENST00000512648 A0A1W2PP64 1363 aa32.8■■■□□ 2.84
SPOCK3-221ENST00000512648 ATP7BP35670 1465 aa32.79■■■□□ 2.84
SPOCK3-221ENST00000512648 HDGFL2Q7Z4V5 671 aaPredicted RBP32.79■■■□□ 2.84
SPOCK3-221ENST00000512648 XRN1Q8IZH2 1706 aaKnown RBP32.77■■■□□ 2.84
SPOCK3-221ENST00000512648 CABP1Q9NZU7 370 aa32.77■■■□□ 2.84
SPOCK3-221ENST00000512648 CCDC61Q9Y6R9 512 aa32.75■■■□□ 2.83
SPOCK3-221ENST00000512648 NUDT16Q96DE0 195 aaKnown RBP32.74■■■□□ 2.83
SPOCK3-221ENST00000512648 ZBED9Q6R2W3 1325 aa32.74■■■□□ 2.83
SPOCK3-221ENST00000512648 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.72■■■□□ 2.83
SPOCK3-221ENST00000512648 NPHP4O75161 1426 aaPredicted RBP32.72■■■□□ 2.83
SPOCK3-221ENST00000512648 MORC1Q86VD1 984 aa32.71■■■□□ 2.83
SPOCK3-221ENST00000512648 CPSF1Q10570 1443 aaKnown RBP32.71■■■□□ 2.83
SPOCK3-221ENST00000512648 PPIP5K1Q6PFW1 1433 aa32.67■■■□□ 2.82
SPOCK3-221ENST00000512648 KCNA6P17658 529 aa32.66■■■□□ 2.82
SPOCK3-221ENST00000512648 ZNF692Q9BU19 519 aaPredicted RBP32.66■■■□□ 2.82
SPOCK3-221ENST00000512648 POLR3AO14802 1390 aaPredicted RBP32.65■■■□□ 2.82
SPOCK3-221ENST00000512648 PLEKHG3A1L390 1219 aa32.64■■■□□ 2.82
SPOCK3-221ENST00000512648 FYB1O15117 783 aa32.63■■■□□ 2.81
SPOCK3-221ENST00000512648 PRR36Q9H6K5 1346 aa32.63■■■□□ 2.81
SPOCK3-221ENST00000512648 CHD2O14647 1828 aaKnown RBP32.62■■■□□ 2.81
SPOCK3-221ENST00000512648 CDC42BPGQ6DT37 1551 aa32.61■■■□□ 2.81
SPOCK3-221ENST00000512648 EDC4Q6P2E9 1401 aaKnown RBP32.61■■■□□ 2.81
SPOCK3-221ENST00000512648 BLMP54132 1417 aaPredicted RBP32.58■■■□□ 2.81
SPOCK3-221ENST00000512648 SCAF1Q9H7N4 1312 aaKnown RBP32.58■■■□□ 2.81
SPOCK3-221ENST00000512648 NCKAP5LQ9HCH0 1330 aa32.56■■■□□ 2.8
SPOCK3-221ENST00000512648 KDM4FA0A1W2PPD8 638 aa32.56■■■□□ 2.8
SPOCK3-221ENST00000512648 GTF3C3Q9Y5Q9 886 aa32.56■■■□□ 2.8
SPOCK3-221ENST00000512648 ANKARQ7Z5J8 1434 aa32.55■■■□□ 2.8
SPOCK3-221ENST00000512648 TOPAZ1Q8N9V7 1692 aa32.54■■■□□ 2.8
SPOCK3-221ENST00000512648 WDR43Q15061 677 aaKnown RBP eCLIP32.54■■■□□ 2.8
SPOCK3-221ENST00000512648 ADAMTS8Q9UP79 889 aa32.52■■■□□ 2.8
SPOCK3-221ENST00000512648 ANKRD26Q9UPS8 1709 aa32.51■■■□□ 2.8
SPOCK3-221ENST00000512648 GGNBP2Q9H3C7 697 aa32.5■■■□□ 2.79
SPOCK3-221ENST00000512648 NWD1Q149M9 1564 aa32.5■■■□□ 2.79
SPOCK3-221ENST00000512648 MTHFSP49914 203 aa32.48■■■□□ 2.79
SPOCK3-221ENST00000512648 MON2Q7Z3U7 1717 aa32.48■■■□□ 2.79
SPOCK3-221ENST00000512648 CFAP53Q96M91 514 aa32.48■■■□□ 2.79
SPOCK3-221ENST00000512648 AKAP12Q02952 1782 aa32.47■■■□□ 2.79
SPOCK3-221ENST00000512648 ACEP12821 1306 aa32.46■■■□□ 2.79
SPOCK3-221ENST00000512648 KIF20BQ96Q89 1820 aa32.44■■■□□ 2.78
SPOCK3-221ENST00000512648 ADGRL3Q9HAR2 1447 aa32.43■■■□□ 2.78
SPOCK3-221ENST00000512648 TNNT2P45379 298 aaPredicted RBP32.42■■■□□ 2.78
SPOCK3-221ENST00000512648 PDE3BQ13370 1112 aa32.42■■■□□ 2.78
SPOCK3-221ENST00000512648 SSH2Q76I76 1423 aa32.41■■■□□ 2.78
SPOCK3-221ENST00000512648 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.41■■■□□ 2.78
SPOCK3-221ENST00000512648 USP6P35125 1406 aa32.41■■■□□ 2.78
SPOCK3-221ENST00000512648 ITSN1Q15811 1721 aa32.41■■■□□ 2.78
SPOCK3-221ENST00000512648 FMN2Q9NZ56 1722 aa32.4■■■□□ 2.78
SPOCK3-221ENST00000512648 NGEFQ8N5V2 710 aa32.4■■■□□ 2.78
SPOCK3-221ENST00000512648 NKTRP30414 1462 aaKnown RBP32.39■■■□□ 2.78
SPOCK3-221ENST00000512648 SMG6Q86US8 1419 aaKnown RBP32.39■■■□□ 2.78
SPOCK3-221ENST00000512648 AATKQ6ZMQ8 1374 aa32.39■■■□□ 2.78
SPOCK3-221ENST00000512648 TTC21BQ7Z4L5 1316 aa32.39■■■□□ 2.78
SPOCK3-221ENST00000512648 PNPLA6Q8IY17 1366 aa32.38■■■□□ 2.77
SPOCK3-221ENST00000512648 TTC21AQ8NDW8 1320 aa32.36■■■□□ 2.77
SPOCK3-221ENST00000512648 NCOA3Q9Y6Q9 1424 aa32.35■■■□□ 2.77
SPOCK3-221ENST00000512648 NRKQ7Z2Y5 1582 aa32.35■■■□□ 2.77
SPOCK3-221ENST00000512648 NME9Q86XW9 330 aa32.35■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms