RNA–Protein interactions for RNA: ENST00000512643.1

PDS5A-209, Transcript of PDS5 cohesin associated factor A, humanhuman

TSL 4

Gene PDS5A, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-209ENST00000512643 CFAP70Q5T0N1 1121 aa7.73□□□□□ -1.17
PDS5A-209ENST00000512643 SCUBE2Q9NQ36 999 aa7.73□□□□□ -1.17
PDS5A-209ENST00000512643 CFAP99D6REC4 459 aa7.72□□□□□ -1.17
PDS5A-209ENST00000512643 C6orf229H3BNL8 230 aa7.72□□□□□ -1.17
PDS5A-209ENST00000512643 CSB-PGBD3P0DP91 1061 aa7.71□□□□□ -1.18
PDS5A-209ENST00000512643 ZBED2Q9BTP6 218 aa7.71□□□□□ -1.18
PDS5A-209ENST00000512643 PPP1R12CQ9BZL4 782 aa7.71□□□□□ -1.18
PDS5A-209ENST00000512643 SEPT9Q9UHD8 586 aaPredicted RBP7.71□□□□□ -1.18
PDS5A-209ENST00000512643 USTQ9Y2C2 406 aa7.71□□□□□ -1.18
PDS5A-209ENST00000512643 PATL2C9JE40 543 aaKnown RBP7.7□□□□□ -1.18
PDS5A-209ENST00000512643 HOXB1P14653 301 aaPredicted RBP7.7□□□□□ -1.18
PDS5A-209ENST00000512643 SLC4A3P48751 1232 aa7.7□□□□□ -1.18
PDS5A-209ENST00000512643 FUT2Q10981 343 aa7.7□□□□□ -1.18
PDS5A-209ENST00000512643 EPS8L1Q8TE68 723 aa7.7□□□□□ -1.18
PDS5A-209ENST00000512643 PALM3A6NDB9 673 aaPredicted RBP7.69□□□□□ -1.18
PDS5A-209ENST00000512643 POTEB2H3BUK9 544 aa7.69□□□□□ -1.18
PDS5A-209ENST00000512643 MFAP1P55081 439 aaKnown RBP7.69□□□□□ -1.18
PDS5A-209ENST00000512643 GRIPAP1Q4V328 841 aa7.69□□□□□ -1.18
PDS5A-209ENST00000512643 CFHP08603 1231 aa7.68□□□□□ -1.18
PDS5A-209ENST00000512643 HDGFP51858 240 aaKnown RBP7.68□□□□□ -1.18
PDS5A-209ENST00000512643 MAMSTRQ6ZN01 415 aa7.68□□□□□ -1.18
PDS5A-209ENST00000512643 RGS22Q8NE09 1264 aa7.68□□□□□ -1.18
PDS5A-209ENST00000512643 UCN2Q96RP3 112 aa7.68□□□□□ -1.18
PDS5A-209ENST00000512643 ALG2Q9H553 416 aa7.68□□□□□ -1.18
PDS5A-209ENST00000512643 RABGEF1Q9UJ41 708 aa7.68□□□□□ -1.18
PDS5A-209ENST00000512643 BRD1O95696 1058 aa7.67□□□□□ -1.18
PDS5A-209ENST00000512643 LMOD1P29536 600 aaPredicted RBP7.67□□□□□ -1.18
PDS5A-209ENST00000512643 PSEN2P49810 448 aa7.67□□□□□ -1.18
PDS5A-209ENST00000512643 KCNA1Q09470 495 aa7.67□□□□□ -1.18
PDS5A-209ENST00000512643 SLF2Q8IX21 1173 aa7.67□□□□□ -1.18
PDS5A-209ENST00000512643 SNPHO15079 494 aa7.66□□□□□ -1.18
PDS5A-209ENST00000512643 RNF40O75150 1001 aa7.66□□□□□ -1.18
PDS5A-209ENST00000512643 SOX11P35716 441 aa7.66□□□□□ -1.18
PDS5A-209ENST00000512643 SRPK2P78362 688 aaKnown RBP7.66□□□□□ -1.18
PDS5A-209ENST00000512643 FAM98CQ17RN3 349 aaKnown RBP7.66□□□□□ -1.18
PDS5A-209ENST00000512643 PRR7Q8TB68 274 aa7.66□□□□□ -1.18
PDS5A-209ENST00000512643 SYMPKQ92797 1274 aaKnown RBP7.66□□□□□ -1.18
PDS5A-209ENST00000512643 MTMR7Q9Y216 660 aa7.66□□□□□ -1.18
PDS5A-209ENST00000512643 NR6A1Q15406 480 aa7.65□□□□□ -1.18
PDS5A-209ENST00000512643 TFIP11Q9UBB9 837 aaKnown RBP7.65□□□□□ -1.18
PDS5A-209ENST00000512643 CARNS1A5YM72 827 aa7.64□□□□□ -1.19
PDS5A-209ENST00000512643 ATP6V1AP38606 617 aa7.64□□□□□ -1.19
PDS5A-209ENST00000512643 SEMA3FQ13275 785 aa7.64□□□□□ -1.19
PDS5A-209ENST00000512643 SAMD7Q7Z3H4 446 aa7.64□□□□□ -1.19
PDS5A-209ENST00000512643 PNMA1Q8ND90 353 aa7.64□□□□□ -1.19
PDS5A-209ENST00000512643 PER1O15534 1290 aaPredicted RBP7.63□□□□□ -1.19
PDS5A-209ENST00000512643 MAFBQ9Y5Q3 323 aaPredicted RBP7.63□□□□□ -1.19
PDS5A-209ENST00000512643 CDCA8Q53HL2 280 aa7.62□□□□□ -1.19
PDS5A-209ENST00000512643 FOXD4L5Q5VV16 416 aaPredicted RBP7.62□□□□□ -1.19
PDS5A-209ENST00000512643 RETREG3Q86VR2 466 aa7.62□□□□□ -1.19
PDS5A-209ENST00000512643 FOXD4L4Q8WXT5 416 aaPredicted RBP7.62□□□□□ -1.19
PDS5A-209ENST00000512643 ARHGAP33O14559 1287 aa7.61□□□□□ -1.19
PDS5A-209ENST00000512643 EIF5BO60841 1220 aaKnown RBP7.61□□□□□ -1.19
PDS5A-209ENST00000512643 EIF4G2P78344 907 aaKnown RBP eCLIP7.61□□□□□ -1.19
PDS5A-209ENST00000512643 KMT5BQ4FZB7 885 aa7.61□□□□□ -1.19
PDS5A-209ENST00000512643 TBC1D9Q6ZT07 1266 aa7.61□□□□□ -1.19
PDS5A-209ENST00000512643 SLC4A5Q9BY07 1137 aa7.61□□□□□ -1.19
PDS5A-209ENST00000512643 ATG7O95352 703 aa7.6□□□□□ -1.19
PDS5A-209ENST00000512643 DMRTA1Q5VZB9 504 aa7.6□□□□□ -1.19
PDS5A-209ENST00000512643 BCL11AQ9H165 835 aa7.6□□□□□ -1.19
PDS5A-209ENST00000512643 IVNS1ABPQ9Y6Y0 642 aa7.6□□□□□ -1.19
PDS5A-209ENST00000512643 MORN1Q5T089 497 aa7.59□□□□□ -1.19
PDS5A-209ENST00000512643 AXIN2Q9Y2T1 843 aa7.59□□□□□ -1.19
PDS5A-209ENST00000512643 TMEM88BA6NKF7 163 aa7.58□□□□□ -1.2
PDS5A-209ENST00000512643 ATP9BO43861 1147 aa7.58□□□□□ -1.2
PDS5A-209ENST00000512643 RBM25P49756 843 aaKnown RBP7.58□□□□□ -1.2
PDS5A-209ENST00000512643 Q3C1V9 767 aa7.58□□□□□ -1.2
PDS5A-209ENST00000512643 PUS10Q3MIT2 529 aaKnown RBP7.58□□□□□ -1.2
PDS5A-209ENST00000512643 VARS2Q5ST30 1063 aaKnown RBP7.58□□□□□ -1.2
PDS5A-209ENST00000512643 DESI1Q6ICB0 168 aa7.58□□□□□ -1.2
PDS5A-209ENST00000512643 POTEEQ6S8J3 1075 aa7.58□□□□□ -1.2
PDS5A-209ENST00000512643 LAPTM4BQ86VI4 370 aa7.58□□□□□ -1.2
PDS5A-209ENST00000512643 NBPF3Q9H094 633 aa7.58□□□□□ -1.2
PDS5A-209ENST00000512643 VPS9D1Q9Y2B5 631 aa7.58□□□□□ -1.2
PDS5A-209ENST00000512643 SLC27A5Q9Y2P5 690 aa7.58□□□□□ -1.2
PDS5A-209ENST00000512643 FBXO45P0C2W1 286 aa7.57□□□□□ -1.2
PDS5A-209ENST00000512643 NR1H3Q13133 447 aa7.57□□□□□ -1.2
PDS5A-209ENST00000512643 VRTNQ9H8Y1 702 aa7.57□□□□□ -1.2
PDS5A-209ENST00000512643 ERBB3P21860 1342 aa7.56□□□□□ -1.2
PDS5A-209ENST00000512643 LYPD8Q6UX82 237 aa7.56□□□□□ -1.2
PDS5A-209ENST00000512643 ZNF428Q96B54 188 aa7.56□□□□□ -1.2
PDS5A-209ENST00000512643 ACTN4O43707 911 aaKnown RBP7.55□□□□□ -1.2
PDS5A-209ENST00000512643 PBX2P40425 430 aa7.55□□□□□ -1.2
PDS5A-209ENST00000512643 CCDC27Q2M243 656 aa7.55□□□□□ -1.2
PDS5A-209ENST00000512643 ZFRQ96KR1 1074 aaKnown RBP7.55□□□□□ -1.2
PDS5A-209ENST00000512643 ZBBXA8MT70 800 aa7.54□□□□□ -1.2
PDS5A-209ENST00000512643 PIK3CDO00329 1044 aa7.54□□□□□ -1.2
PDS5A-209ENST00000512643 B4GALNT3Q6L9W6 998 aa7.54□□□□□ -1.2
PDS5A-209ENST00000512643 RNF19BQ6ZMZ0 732 aa7.54□□□□□ -1.2
PDS5A-209ENST00000512643 SND1Q7KZF4 910 aaKnown RBP eCLIP7.54□□□□□ -1.2
PDS5A-209ENST00000512643 FKBPLQ9UIM3 349 aa7.54□□□□□ -1.2
PDS5A-209ENST00000512643 KANK4Q5T7N3 995 aaPredicted RBP7.53□□□□□ -1.2
PDS5A-209ENST00000512643 BLOC1S3Q6QNY0 202 aa7.53□□□□□ -1.2
PDS5A-209ENST00000512643 LRCH3Q96II8 777 aa7.53□□□□□ -1.2
PDS5A-209ENST00000512643 USP17L3A6NCW0 530 aa7.52□□□□□ -1.21
PDS5A-209ENST00000512643 USP17L4A6NCW7 530 aa7.52□□□□□ -1.21
PDS5A-209ENST00000512643 USP17L5A8MUK1 530 aa7.52□□□□□ -1.21
PDS5A-209ENST00000512643 USP17L2Q6R6M4 530 aa7.52□□□□□ -1.21
PDS5A-209ENST00000512643 USP17L1Q7RTZ2 530 aa7.52□□□□□ -1.21
PDS5A-209ENST00000512643 NFATC2IPQ8NCF5 419 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms