RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 CARD11Q9BXL7 1154 aa11.31□□□□□ -0.6
HTT-209ENST00000512068 CABP2Q9NPB3 220 aa11.31□□□□□ -0.6
HTT-209ENST00000512068 SPATA31E1Q6ZUB1 1445 aa11.31□□□□□ -0.6
HTT-209ENST00000512068 PRAG1Q86YV5 1406 aa11.31□□□□□ -0.6
HTT-209ENST00000512068 UGGT1Q9NYU2 1555 aa11.3□□□□□ -0.6
HTT-209ENST00000512068 TRPM1Q7Z4N2 1603 aa11.3□□□□□ -0.6
HTT-209ENST00000512068 MROH2AA6NES4 1674 aa11.3□□□□□ -0.6
HTT-209ENST00000512068 SIGLEC1Q9BZZ2 1709 aa11.29□□□□□ -0.6
HTT-209ENST00000512068 NOS1P29475 1434 aa11.29□□□□□ -0.6
HTT-209ENST00000512068 EFCAB3Q8N7B9 438 aa11.29□□□□□ -0.6
HTT-209ENST00000512068 HIRIP3Q9BW71 556 aaPredicted RBP11.29□□□□□ -0.6
HTT-209ENST00000512068 SLC52A1Q9NWF4 448 aa11.29□□□□□ -0.6
HTT-209ENST00000512068 ADGRB3O60242 1522 aa11.29□□□□□ -0.6
HTT-209ENST00000512068 USP47Q96K76 1375 aa11.28□□□□□ -0.6
HTT-209ENST00000512068 SOX12O15370 315 aa11.28□□□□□ -0.6
HTT-209ENST00000512068 MFRPQ9BY79 579 aa11.28□□□□□ -0.6
HTT-209ENST00000512068 SYNMO15061 1565 aa11.28□□□□□ -0.6
HTT-209ENST00000512068 PIK3C2BO00750 1634 aa11.27□□□□□ -0.6
HTT-209ENST00000512068 MADDQ8WXG6 1647 aa11.27□□□□□ -0.6
HTT-209ENST00000512068 MYOM2P54296 1465 aa11.27□□□□□ -0.6
HTT-209ENST00000512068 ERVK-7P63135 1459 aa11.27□□□□□ -0.6
HTT-209ENST00000512068 TTLL13PA6NNM8 815 aa11.27□□□□□ -0.61
HTT-209ENST00000512068 RPGRIP1LQ68CZ1 1315 aa11.27□□□□□ -0.61
HTT-209ENST00000512068 LAMC1P11047 1609 aa11.27□□□□□ -0.61
HTT-209ENST00000512068 POLR1AO95602 1720 aaPredicted RBP11.26□□□□□ -0.61
HTT-209ENST00000512068 IFT172Q9UG01 1749 aa11.26□□□□□ -0.61
HTT-209ENST00000512068 VSIG10Q8N0Z9 540 aa11.26□□□□□ -0.61
HTT-209ENST00000512068 BMP2KQ9NSY1 1161 aaPredicted RBP11.26□□□□□ -0.61
HTT-209ENST00000512068 PPLO60437 1756 aa11.26□□□□□ -0.61
HTT-209ENST00000512068 GABBR2O75899 941 aa11.25□□□□□ -0.61
HTT-209ENST00000512068 TSHZ2Q9NRE2 1034 aa11.25□□□□□ -0.61
HTT-209ENST00000512068 KIAA1210Q9ULL0 1709 aa11.25□□□□□ -0.61
HTT-209ENST00000512068 FER1L4A9Z1Z3 1794 aa11.25□□□□□ -0.61
HTT-209ENST00000512068 SPATA31D1Q6ZQQ2 1576 aa11.24□□□□□ -0.61
HTT-209ENST00000512068 GOLGA2Q08379 1002 aa11.23□□□□□ -0.61
HTT-209ENST00000512068 DDX10Q13206 875 aaKnown RBP11.23□□□□□ -0.61
HTT-209ENST00000512068 FBXO22Q8NEZ5 403 aa11.23□□□□□ -0.61
HTT-209ENST00000512068 EIF3AQ14152 1382 aaKnown RBP11.23□□□□□ -0.61
HTT-209ENST00000512068 ZMYM3Q14202 1370 aa11.23□□□□□ -0.61
HTT-209ENST00000512068 NLRP6P59044 892 aa11.22□□□□□ -0.61
HTT-209ENST00000512068 MYO5BQ9ULV0 1848 aa11.22□□□□□ -0.61
HTT-209ENST00000512068 GPRASP1Q5JY77 1395 aa11.21□□□□□ -0.61
HTT-209ENST00000512068 IDI1Q13907 227 aa11.21□□□□□ -0.61
HTT-209ENST00000512068 FBXO31Q5XUX0 539 aaPredicted RBP11.21□□□□□ -0.61
HTT-209ENST00000512068 PHF8Q9UPP1 1060 aa11.21□□□□□ -0.61
HTT-209ENST00000512068 TMEM131LA2VDJ0 1609 aa11.2□□□□□ -0.62
HTT-209ENST00000512068 ASTLQ6HA08 431 aaPredicted RBP11.2□□□□□ -0.62
HTT-209ENST00000512068 POLR3GLQ9BT43 218 aa11.2□□□□□ -0.62
HTT-209ENST00000512068 TNRQ92752 1358 aa11.19□□□□□ -0.62
HTT-209ENST00000512068 CCDC7Q96M83 1385 aa11.19□□□□□ -0.62
HTT-209ENST00000512068 MKRN3Q13064 507 aaKnown RBP11.19□□□□□ -0.62
HTT-209ENST00000512068 NBPF1Q3BBV0 1214 aa11.19□□□□□ -0.62
HTT-209ENST00000512068 TRIM35Q9UPQ4 493 aa11.19□□□□□ -0.62
HTT-209ENST00000512068 NEXMIFQ5QGS0 1516 aa11.19□□□□□ -0.62
HTT-209ENST00000512068 SCAF11Q99590 1463 aaKnown RBP11.19□□□□□ -0.62
HTT-209ENST00000512068 IQGAP1P46940 1657 aa11.18□□□□□ -0.62
HTT-209ENST00000512068 ADGRF5Q8IZF2 1346 aa11.18□□□□□ -0.62
HTT-209ENST00000512068 ST20-MTHFSA0A0A6YYL1 179 aa11.18□□□□□ -0.62
HTT-209ENST00000512068 ATMINO43313 823 aaPredicted RBP11.18□□□□□ -0.62
HTT-209ENST00000512068 ANP32CO43423 234 aa11.18□□□□□ -0.62
HTT-209ENST00000512068 HDGFP51858 240 aaKnown RBP11.18□□□□□ -0.62
HTT-209ENST00000512068 NRXN1Q9ULB1 1477 aa11.18□□□□□ -0.62
HTT-209ENST00000512068 C3P01024 1663 aa11.17□□□□□ -0.62
HTT-209ENST00000512068 PIK3C2GO75747 1445 aa11.17□□□□□ -0.62
HTT-209ENST00000512068 SETBP1Q9Y6X0 1596 aa11.16□□□□□ -0.62
HTT-209ENST00000512068 WASHC2AQ641Q2 1341 aa11.16□□□□□ -0.62
HTT-209ENST00000512068 ATN1P54259 1190 aaPredicted RBP11.16□□□□□ -0.62
HTT-209ENST00000512068 TMF1P82094 1093 aa11.16□□□□□ -0.62
HTT-209ENST00000512068 ILDR1Q86SU0 546 aaPredicted RBP11.16□□□□□ -0.62
HTT-209ENST00000512068 KIF7Q2M1P5 1343 aa11.15□□□□□ -0.62
HTT-209ENST00000512068 KDM5AP29375 1690 aaKnown RBP11.15□□□□□ -0.62
HTT-209ENST00000512068 RIMS1Q86UR5 1692 aaKnown RBP11.15□□□□□ -0.62
HTT-209ENST00000512068 NLRP1Q9C000 1473 aa11.15□□□□□ -0.62
HTT-209ENST00000512068 CFAP70Q5T0N1 1121 aa11.15□□□□□ -0.62
HTT-209ENST00000512068 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.15□□□□□ -0.62
HTT-209ENST00000512068 ZFYVE9O95405 1425 aa11.15□□□□□ -0.62
HTT-209ENST00000512068 CDCA8Q53HL2 280 aa11.14□□□□□ -0.63
HTT-209ENST00000512068 NUTM2DQ5VT03 806 aaPredicted RBP11.14□□□□□ -0.63
HTT-209ENST00000512068 SP7Q8TDD2 431 aaPredicted RBP11.14□□□□□ -0.63
HTT-209ENST00000512068 MS4A4AQ96JQ5 239 aa11.14□□□□□ -0.63
HTT-209ENST00000512068 RIMS2Q9UQ26 1411 aa11.14□□□□□ -0.63
HTT-209ENST00000512068 A2ML1A8K2U0 1454 aa11.13□□□□□ -0.63
HTT-209ENST00000512068 PPP1R37O75864 691 aa11.12□□□□□ -0.63
HTT-209ENST00000512068 BCANQ96GW7 911 aa11.12□□□□□ -0.63
HTT-209ENST00000512068 C14orf93Q9H972 538 aaKnown RBP11.12□□□□□ -0.63
HTT-209ENST00000512068 UBR1Q8IWV7 1749 aa11.12□□□□□ -0.63
HTT-209ENST00000512068 DCBLD2Q96PD2 775 aa11.11□□□□□ -0.63
HTT-209ENST00000512068 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.11□□□□□ -0.63
HTT-209ENST00000512068 C11orf95C9JLR9 678 aaPredicted RBP11.1□□□□□ -0.63
HTT-209ENST00000512068 CEBPAP49715 358 aaPredicted RBP11.1□□□□□ -0.63
HTT-209ENST00000512068 IER5LQ5T953 404 aa11.1□□□□□ -0.63
HTT-209ENST00000512068 MYO3AQ8NEV4 1616 aa11.09□□□□□ -0.63
HTT-209ENST00000512068 ADAMTSL3P82987 1691 aa11.09□□□□□ -0.63
HTT-209ENST00000512068 EID1Q9Y6B2 187 aa11.09□□□□□ -0.63
HTT-209ENST00000512068 CENPJQ9HC77 1338 aaPredicted RBP11.09□□□□□ -0.63
HTT-209ENST00000512068 QRICH2Q9H0J4 1663 aa11.08□□□□□ -0.64
HTT-209ENST00000512068 TRAK1Q9UPV9 953 aa11.08□□□□□ -0.64
HTT-209ENST00000512068 ADGRB1O14514 1584 aa11.07□□□□□ -0.64
HTT-209ENST00000512068 TMEM2Q9UHN6 1383 aa11.07□□□□□ -0.64
HTT-209ENST00000512068 ALKQ9UM73 1620 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms