RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 NGLY1Q96IV0 654 aa12.78□□□□□ -0.36
NR1I3-228ENST00000511676 POTEAQ6S8J7 498 aa12.77□□□□□ -0.37
NR1I3-228ENST00000511676 CARD11Q9BXL7 1154 aa12.77□□□□□ -0.37
NR1I3-228ENST00000511676 CHD2O14647 1828 aaKnown RBP12.76□□□□□ -0.37
NR1I3-228ENST00000511676 ZBTB22O15209 634 aa12.76□□□□□ -0.37
NR1I3-228ENST00000511676 SLC24A1O60721 1099 aa12.76□□□□□ -0.37
NR1I3-228ENST00000511676 HSPA5P11021 654 aaKnown RBP12.76□□□□□ -0.37
NR1I3-228ENST00000511676 KDM2AQ9Y2K7 1162 aa12.76□□□□□ -0.37
NR1I3-228ENST00000511676 PHLPP1O60346 1717 aa12.75□□□□□ -0.37
NR1I3-228ENST00000511676 DIEXFQ68CQ4 756 aaKnown RBP12.75□□□□□ -0.37
NR1I3-228ENST00000511676 XIRP1Q702N8 1843 aaKnown RBP12.74□□□□□ -0.37
NR1I3-228ENST00000511676 EIF3AQ14152 1382 aaKnown RBP12.74□□□□□ -0.37
NR1I3-228ENST00000511676 RBM33Q96EV2 1170 aaKnown RBP12.74□□□□□ -0.37
NR1I3-228ENST00000511676 BRINP3Q76B58 766 aa12.72□□□□□ -0.37
NR1I3-228ENST00000511676 SBNO2Q9Y2G9 1366 aa12.71□□□□□ -0.37
NR1I3-228ENST00000511676 ADGRF5Q8IZF2 1346 aa12.71□□□□□ -0.37
NR1I3-228ENST00000511676 RBM6P78332 1123 aaKnown RBP12.71□□□□□ -0.37
NR1I3-228ENST00000511676 C14orf93Q9H972 538 aaKnown RBP12.71□□□□□ -0.37
NR1I3-228ENST00000511676 ADGRB1O14514 1584 aa12.71□□□□□ -0.37
NR1I3-228ENST00000511676 CDK12Q9NYV4 1490 aaPredicted RBP12.71□□□□□ -0.38
NR1I3-228ENST00000511676 ADAMTS13Q76LX8 1427 aa12.71□□□□□ -0.38
NR1I3-228ENST00000511676 LRPPRCP42704 1394 aaKnown RBP12.7□□□□□ -0.38
NR1I3-228ENST00000511676 AHDC1Q5TGY3 1603 aaPredicted RBP12.7□□□□□ -0.38
NR1I3-228ENST00000511676 CCDC7Q96M83 1385 aa12.69□□□□□ -0.38
NR1I3-228ENST00000511676 NUTM2BA6NNL0 878 aaPredicted RBP12.69□□□□□ -0.38
NR1I3-228ENST00000511676 NUTM2EB1AL46 878 aaPredicted RBP12.69□□□□□ -0.38
NR1I3-228ENST00000511676 NUTM2DQ5VT03 806 aaPredicted RBP12.69□□□□□ -0.38
NR1I3-228ENST00000511676 CCDC125Q86Z20 511 aa12.69□□□□□ -0.38
NR1I3-228ENST00000511676 NUTM2AQ8IVF1 878 aaPredicted RBP12.69□□□□□ -0.38
NR1I3-228ENST00000511676 QTRT2Q9H974 415 aaKnown RBP12.68□□□□□ -0.38
NR1I3-228ENST00000511676 MYO5BQ9ULV0 1848 aa12.67□□□□□ -0.38
NR1I3-228ENST00000511676 NBPF1Q3BBV0 1214 aa12.67□□□□□ -0.38
NR1I3-228ENST00000511676 WASHC2AQ641Q2 1341 aa12.66□□□□□ -0.38
NR1I3-228ENST00000511676 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.66□□□□□ -0.38
NR1I3-228ENST00000511676 UPF1Q92900 1129 aaKnown RBP eCLIP12.66□□□□□ -0.38
NR1I3-228ENST00000511676 AFF2P51816 1311 aa12.65□□□□□ -0.38
NR1I3-228ENST00000511676 SHPRHQ149N8 1683 aa12.65□□□□□ -0.38
NR1I3-228ENST00000511676 TRPC5Q9UL62 973 aaPredicted RBP12.65□□□□□ -0.38
NR1I3-228ENST00000511676 COL16A1Q07092 1604 aaPredicted RBP12.65□□□□□ -0.38
NR1I3-228ENST00000511676 NPHP3Q7Z494 1330 aa12.64□□□□□ -0.39
NR1I3-228ENST00000511676 ADGRL3Q9HAR2 1447 aa12.64□□□□□ -0.39
NR1I3-228ENST00000511676 ST20-MTHFSA0A0A6YYL1 179 aa12.64□□□□□ -0.39
NR1I3-228ENST00000511676 CDCA8Q53HL2 280 aa12.64□□□□□ -0.39
NR1I3-228ENST00000511676 CFAP70Q5T0N1 1121 aa12.64□□□□□ -0.39
NR1I3-228ENST00000511676 C8orf37Q96NL8 207 aa12.64□□□□□ -0.39
NR1I3-228ENST00000511676 KIF7Q2M1P5 1343 aa12.63□□□□□ -0.39
NR1I3-228ENST00000511676 DLC1Q96QB1 1528 aa12.63□□□□□ -0.39
NR1I3-228ENST00000511676 TESK2Q96S53 571 aa12.63□□□□□ -0.39
NR1I3-228ENST00000511676 ASXL1Q8IXJ9 1541 aa12.62□□□□□ -0.39
NR1I3-228ENST00000511676 ATAD2Q6PL18 1390 aa12.61□□□□□ -0.39
NR1I3-228ENST00000511676 TMF1P82094 1093 aa12.61□□□□□ -0.39
NR1I3-228ENST00000511676 PUS7Q96PZ0 661 aaKnown RBP12.61□□□□□ -0.39
NR1I3-228ENST00000511676 USP21Q9UK80 565 aa12.61□□□□□ -0.39
NR1I3-228ENST00000511676 SETD1AO15047 1707 aaKnown RBP12.61□□□□□ -0.39
NR1I3-228ENST00000511676 NRXN3Q9Y4C0 1643 aa12.61□□□□□ -0.39
NR1I3-228ENST00000511676 MST1RQ04912 1400 aa12.61□□□□□ -0.39
NR1I3-228ENST00000511676 PTCH1Q13635 1447 aa12.61□□□□□ -0.39
NR1I3-228ENST00000511676 PSME1Q06323 249 aa12.6□□□□□ -0.39
NR1I3-228ENST00000511676 TECPR2O15040 1411 aa12.6□□□□□ -0.39
NR1I3-228ENST00000511676 METP08581 1390 aa12.59□□□□□ -0.39
NR1I3-228ENST00000511676 HIRIP3Q9BW71 556 aaPredicted RBP12.59□□□□□ -0.39
NR1I3-228ENST00000511676 ZRANB1Q9UGI0 708 aa12.59□□□□□ -0.39
NR1I3-228ENST00000511676 PTPRUQ92729 1446 aa12.59□□□□□ -0.39
NR1I3-228ENST00000511676 YTHDC2Q9H6S0 1430 aaKnown RBP12.59□□□□□ -0.39
NR1I3-228ENST00000511676 ARHGEF28Q8N1W1 1705 aaKnown RBP12.59□□□□□ -0.39
NR1I3-228ENST00000511676 SOS2Q07890 1332 aaPredicted RBP12.59□□□□□ -0.39
NR1I3-228ENST00000511676 CENPJQ9HC77 1338 aaPredicted RBP12.59□□□□□ -0.39
NR1I3-228ENST00000511676 ABCC11Q96J66 1382 aa12.58□□□□□ -0.4
NR1I3-228ENST00000511676 DDX10Q13206 875 aaKnown RBP12.58□□□□□ -0.4
NR1I3-228ENST00000511676 ESCO1Q5FWF5 840 aa12.58□□□□□ -0.4
NR1I3-228ENST00000511676 KNDC1Q76NI1 1749 aa12.58□□□□□ -0.4
NR1I3-228ENST00000511676 FNBP4Q8N3X1 1017 aaPredicted RBP12.58□□□□□ -0.4
NR1I3-228ENST00000511676 SIRT1Q96EB6 747 aa12.58□□□□□ -0.4
NR1I3-228ENST00000511676 C11orf95C9JLR9 678 aaPredicted RBP12.57□□□□□ -0.4
NR1I3-228ENST00000511676 SF3B2Q13435 895 aaKnown RBP12.57□□□□□ -0.4
NR1I3-228ENST00000511676 C1orf167Q5SNV9 1468 aa12.57□□□□□ -0.4
NR1I3-228ENST00000511676 PNPLA6Q8IY17 1366 aa12.56□□□□□ -0.4
NR1I3-228ENST00000511676 ADAMTS2O95450 1211 aa12.56□□□□□ -0.4
NR1I3-228ENST00000511676 FOXD4L1Q9NU39 408 aa12.56□□□□□ -0.4
NR1I3-228ENST00000511676 KTN1Q86UP2 1357 aaKnown RBP12.56□□□□□ -0.4
NR1I3-228ENST00000511676 QRICH2Q9H0J4 1663 aa12.55□□□□□ -0.4
NR1I3-228ENST00000511676 XRN1Q8IZH2 1706 aaKnown RBP12.55□□□□□ -0.4
NR1I3-228ENST00000511676 HAP1P54257 671 aaPredicted RBP12.55□□□□□ -0.4
NR1I3-228ENST00000511676 LRP6O75581 1613 aa12.55□□□□□ -0.4
NR1I3-228ENST00000511676 NINLQ9Y2I6 1382 aa12.54□□□□□ -0.4
NR1I3-228ENST00000511676 NHSL1Q5SYE7 1610 aa12.53□□□□□ -0.4
NR1I3-228ENST00000511676 SLC4A2P04920 1241 aa12.53□□□□□ -0.4
NR1I3-228ENST00000511676 CCER2I3L3R5 266 aa12.52□□□□□ -0.41
NR1I3-228ENST00000511676 ANP32CO43423 234 aa12.52□□□□□ -0.41
NR1I3-228ENST00000511676 TMEM132EQ6IEE7 984 aa12.51□□□□□ -0.41
NR1I3-228ENST00000511676 ORAI2Q96SN7 254 aa12.51□□□□□ -0.41
NR1I3-228ENST00000511676 TRAK1Q9UPV9 953 aa12.51□□□□□ -0.41
NR1I3-228ENST00000511676 EVC2Q86UK5 1308 aa12.51□□□□□ -0.41
NR1I3-228ENST00000511676 MIER1Q8N108 512 aa12.5□□□□□ -0.41
NR1I3-228ENST00000511676 GJD4Q96KN9 370 aaPredicted RBP12.5□□□□□ -0.41
NR1I3-228ENST00000511676 MYOM1P52179 1685 aa12.49□□□□□ -0.41
NR1I3-228ENST00000511676 ADGRB2O60241 1585 aa12.49□□□□□ -0.41
NR1I3-228ENST00000511676 ROBO2Q9HCK4 1378 aa12.49□□□□□ -0.41
NR1I3-228ENST00000511676 NPC1L1Q9UHC9 1359 aa12.49□□□□□ -0.41
NR1I3-228ENST00000511676 DCAF8L1A6NGE4 600 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms