RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 ANKLE2Q86XL3 938 aa20.77■□□□□ 0.91
SCLT1-209ENST00000511426 PARD3Q8TEW0 1356 aa20.76■□□□□ 0.91
SCLT1-209ENST00000511426 PTCH1Q13635 1447 aa20.75■□□□□ 0.91
SCLT1-209ENST00000511426 KNSTRNQ9Y448 316 aa20.74■□□□□ 0.91
SCLT1-209ENST00000511426 MYBBP1AQ9BQG0 1328 aaKnown RBP20.72■□□□□ 0.91
SCLT1-209ENST00000511426 ADGRB2O60241 1585 aa20.71■□□□□ 0.91
SCLT1-209ENST00000511426 ANKRD36BQ8N2N9 1353 aa20.7■□□□□ 0.9
SCLT1-209ENST00000511426 USP32Q8NFA0 1604 aa20.7■□□□□ 0.9
SCLT1-209ENST00000511426 BRD4O60885 1362 aaPredicted RBP20.7■□□□□ 0.9
SCLT1-209ENST00000511426 XRN1Q8IZH2 1706 aaKnown RBP20.68■□□□□ 0.9
SCLT1-209ENST00000511426 MINK1Q8N4C8 1332 aaPredicted RBP20.68■□□□□ 0.9
SCLT1-209ENST00000511426 SRPK2P78362 688 aaKnown RBP20.67■□□□□ 0.9
SCLT1-209ENST00000511426 AMER1Q5JTC6 1135 aaPredicted RBP20.67■□□□□ 0.9
SCLT1-209ENST00000511426 SENP3Q9H4L4 574 aaPredicted RBP20.67■□□□□ 0.9
SCLT1-209ENST00000511426 PTPRUQ92729 1446 aa20.66■□□□□ 0.9
SCLT1-209ENST00000511426 ROBO2Q9HCK4 1378 aa20.66■□□□□ 0.9
SCLT1-209ENST00000511426 PLEKHH1Q9ULM0 1364 aa20.66■□□□□ 0.9
SCLT1-209ENST00000511426 SAFB2Q14151 953 aaKnown RBP eCLIP20.66■□□□□ 0.91e-6■■■■□ 20
SCLT1-209ENST00000511426 NLRP13Q86W25 1043 aa20.66■□□□□ 0.9
SCLT1-209ENST00000511426 SLC26A8Q96RN1 970 aa20.66■□□□□ 0.9
SCLT1-209ENST00000511426 MRS2Q9HD23 443 aa20.66■□□□□ 0.9
SCLT1-209ENST00000511426 NSD2O96028 1365 aa20.65■□□□□ 0.9
SCLT1-209ENST00000511426 WAPLQ7Z5K2 1190 aa20.64■□□□□ 0.9
SCLT1-209ENST00000511426 NPHP4O75161 1426 aaPredicted RBP20.64■□□□□ 0.9
SCLT1-209ENST00000511426 WASLO00401 505 aaPredicted RBP20.64■□□□□ 0.89
SCLT1-209ENST00000511426 TMC1Q8TDI8 760 aa20.64■□□□□ 0.89
SCLT1-209ENST00000511426 YTHDC1Q96MU7 727 aaKnown RBP20.64■□□□□ 0.89
SCLT1-209ENST00000511426 CDK19Q9BWU1 502 aa20.64■□□□□ 0.89
SCLT1-209ENST00000511426 ATP7BP35670 1465 aa20.63■□□□□ 0.89
SCLT1-209ENST00000511426 CABP2Q9NPB3 220 aa20.63■□□□□ 0.89
SCLT1-209ENST00000511426 TERF2IPQ9NYB0 399 aa20.63■□□□□ 0.89
SCLT1-209ENST00000511426 AMOTL2Q9Y2J4 779 aa20.63■□□□□ 0.89
SCLT1-209ENST00000511426 SLC12A5Q9H2X9 1139 aa20.62■□□□□ 0.89
SCLT1-209ENST00000511426 NSD3Q9BZ95 1437 aa20.61■□□□□ 0.89
SCLT1-209ENST00000511426 CARD14Q9BXL6 1004 aa20.6■□□□□ 0.89
SCLT1-209ENST00000511426 CGNL1Q0VF96 1302 aa20.6■□□□□ 0.89
SCLT1-209ENST00000511426 CC2D1BQ5T0F9 858 aaKnown RBP20.59■□□□□ 0.89
SCLT1-209ENST00000511426 HDGFL2Q7Z4V5 671 aaPredicted RBP20.58■□□□□ 0.88
SCLT1-209ENST00000511426 CHD2O14647 1828 aaKnown RBP20.57■□□□□ 0.88
SCLT1-209ENST00000511426 A0A1W2PP64 1363 aa20.57■□□□□ 0.88
SCLT1-209ENST00000511426 INSRP06213 1382 aa20.57■□□□□ 0.88
SCLT1-209ENST00000511426 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.56■□□□□ 0.88
SCLT1-209ENST00000511426 CCDC61Q9Y6R9 512 aa20.55■□□□□ 0.88
SCLT1-209ENST00000511426 NWD1Q149M9 1564 aa20.55■□□□□ 0.88
SCLT1-209ENST00000511426 CD163L1Q9NR16 1453 aa20.55■□□□□ 0.88
SCLT1-209ENST00000511426 CCDC184Q52MB2 194 aa20.54■□□□□ 0.88
SCLT1-209ENST00000511426 KDM4FA0A1W2PPD8 638 aa20.53■□□□□ 0.88
SCLT1-209ENST00000511426 PNISRQ8TF01 805 aaKnown RBP20.52■□□□□ 0.88
SCLT1-209ENST00000511426 CPSF1Q10570 1443 aaKnown RBP20.52■□□□□ 0.88
SCLT1-209ENST00000511426 PPIP5K1Q6PFW1 1433 aa20.52■□□□□ 0.88
SCLT1-209ENST00000511426 ANKARQ7Z5J8 1434 aa20.52■□□□□ 0.88
SCLT1-209ENST00000511426 CDC42BPGQ6DT37 1551 aa20.52■□□□□ 0.88
SCLT1-209ENST00000511426 KCNA6P17658 529 aa20.51■□□□□ 0.87
SCLT1-209ENST00000511426 NUDT16Q96DE0 195 aaKnown RBP20.51■□□□□ 0.87
SCLT1-209ENST00000511426 CABP1Q9NZU7 370 aa20.51■□□□□ 0.87
SCLT1-209ENST00000511426 TOPAZ1Q8N9V7 1692 aa20.51■□□□□ 0.87
SCLT1-209ENST00000511426 NKTRP30414 1462 aaKnown RBP20.5■□□□□ 0.87
SCLT1-209ENST00000511426 PPP2R1AP30153 589 aa20.5■□□□□ 0.87
SCLT1-209ENST00000511426 ZNF692Q9BU19 519 aaPredicted RBP20.5■□□□□ 0.87
SCLT1-209ENST00000511426 EDC4Q6P2E9 1401 aaKnown RBP20.49■□□□□ 0.87
SCLT1-209ENST00000511426 CNGB1Q14028 1251 aaPredicted RBP20.49■□□□□ 0.87
SCLT1-209ENST00000511426 ITSN1Q15811 1721 aa20.48■□□□□ 0.87
SCLT1-209ENST00000511426 LMTK3Q96Q04 1460 aa20.47■□□□□ 0.87
SCLT1-209ENST00000511426 NCKAP5LQ9HCH0 1330 aa20.47■□□□□ 0.87
SCLT1-209ENST00000511426 ANKRD26Q9UPS8 1709 aa20.46■□□□□ 0.87
SCLT1-209ENST00000511426 PLEKHG3A1L390 1219 aa20.46■□□□□ 0.87
SCLT1-209ENST00000511426 MORC1Q86VD1 984 aa20.46■□□□□ 0.87
SCLT1-209ENST00000511426 FAM9BQ8IZU0 186 aa20.46■□□□□ 0.87
SCLT1-209ENST00000511426 MON2Q7Z3U7 1717 aa20.45■□□□□ 0.86
SCLT1-209ENST00000511426 ADGRL3Q9HAR2 1447 aa20.45■□□□□ 0.86
SCLT1-209ENST00000511426 PRR36Q9H6K5 1346 aa20.44■□□□□ 0.86
SCLT1-209ENST00000511426 NCOA3Q9Y6Q9 1424 aa20.44■□□□□ 0.86
SCLT1-209ENST00000511426 AKAP12Q02952 1782 aa20.44■□□□□ 0.86
SCLT1-209ENST00000511426 POLR3AO14802 1390 aaPredicted RBP20.43■□□□□ 0.86
SCLT1-209ENST00000511426 HNRNPUQ00839 825 aaKnown RBP eCLIP20.43■□□□□ 0.86
SCLT1-209ENST00000511426 FMN2Q9NZ56 1722 aa20.42■□□□□ 0.86
SCLT1-209ENST00000511426 KIF20BQ96Q89 1820 aa20.41■□□□□ 0.86
SCLT1-209ENST00000511426 ZBED9Q6R2W3 1325 aa20.41■□□□□ 0.86
SCLT1-209ENST00000511426 SCAF1Q9H7N4 1312 aaKnown RBP20.41■□□□□ 0.86
SCLT1-209ENST00000511426 NALCNQ8IZF0 1738 aa20.4■□□□□ 0.86
SCLT1-209ENST00000511426 FYB1O15117 783 aa20.39■□□□□ 0.86
SCLT1-209ENST00000511426 NRKQ7Z2Y5 1582 aa20.38■□□□□ 0.85
SCLT1-209ENST00000511426 BLMP54132 1417 aaPredicted RBP20.37■□□□□ 0.85
SCLT1-209ENST00000511426 USP6P35125 1406 aa20.36■□□□□ 0.85
SCLT1-209ENST00000511426 CFAP53Q96M91 514 aa20.35■□□□□ 0.85
SCLT1-209ENST00000511426 DCCP43146 1447 aa20.35■□□□□ 0.85
SCLT1-209ENST00000511426 ACEP12821 1306 aa20.35■□□□□ 0.85
SCLT1-209ENST00000511426 TTC21AQ8NDW8 1320 aa20.35■□□□□ 0.85
SCLT1-209ENST00000511426 WDR43Q15061 677 aaKnown RBP eCLIP20.35■□□□□ 0.852e-6■■■■■ 30.3
SCLT1-209ENST00000511426 AEBP2Q6ZN18 517 aaPredicted RBP20.34■□□□□ 0.85
SCLT1-209ENST00000511426 SSH2Q76I76 1423 aa20.33■□□□□ 0.85
SCLT1-209ENST00000511426 GGNBP2Q9H3C7 697 aa20.32■□□□□ 0.84
SCLT1-209ENST00000511426 AATKQ6ZMQ8 1374 aa20.32■□□□□ 0.84
SCLT1-209ENST00000511426 HSPA2P54652 639 aa20.31■□□□□ 0.84
SCLT1-209ENST00000511426 STRCQ7RTU9 1775 aa20.31■□□□□ 0.84
SCLT1-209ENST00000511426 PROSER2Q86WR7 435 aaPredicted RBP20.3■□□□□ 0.84
SCLT1-209ENST00000511426 TTC21BQ7Z4L5 1316 aa20.3■□□□□ 0.84
SCLT1-209ENST00000511426 C19orf44Q9H6X5 657 aa20.29■□□□□ 0.84
SCLT1-209ENST00000511426 MTHFSP49914 203 aa20.29■□□□□ 0.84
SCLT1-209ENST00000511426 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms