RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 KMT5BQ4FZB7 885 aa10.87□□□□□ -0.67
CHD1-206ENST00000511067 NUTM2DQ5VT03 806 aaPredicted RBP10.87□□□□□ -0.67
CHD1-206ENST00000511067 NUTM2AQ8IVF1 878 aaPredicted RBP10.87□□□□□ -0.67
CHD1-206ENST00000511067 RNF40O75150 1001 aa10.86□□□□□ -0.67
CHD1-206ENST00000511067 HRCP23327 699 aa10.86□□□□□ -0.67
CHD1-206ENST00000511067 TRAK2O60296 914 aa10.85□□□□□ -0.67
CHD1-206ENST00000511067 ATP6V1AP38606 617 aa10.85□□□□□ -0.67
CHD1-206ENST00000511067 FUT2Q10981 343 aa10.85□□□□□ -0.67
CHD1-206ENST00000511067 RTL5Q5HYW3 569 aaPredicted RBP10.85□□□□□ -0.67
CHD1-206ENST00000511067 PRR14Q9BWN1 585 aa10.85□□□□□ -0.67
CHD1-206ENST00000511067 SNRKQ9NRH2 765 aa10.85□□□□□ -0.67
CHD1-206ENST00000511067 PCDHGC3Q9UN70 934 aa10.85□□□□□ -0.67
CHD1-206ENST00000511067 NYAP1Q6ZVC0 841 aa10.84□□□□□ -0.67
CHD1-206ENST00000511067 PROSER2Q86WR7 435 aaPredicted RBP10.84□□□□□ -0.67
CHD1-206ENST00000511067 CABLES1Q8TDN4 633 aa10.84□□□□□ -0.67
CHD1-206ENST00000511067 WBP1LQ9NX94 342 aa10.84□□□□□ -0.67
CHD1-206ENST00000511067 TSR3Q9UJK0 312 aaKnown RBP10.84□□□□□ -0.67
CHD1-206ENST00000511067 HPS5Q9UPZ3 1129 aa10.84□□□□□ -0.67
CHD1-206ENST00000511067 MTMR2Q13614 643 aa10.83□□□□□ -0.68
CHD1-206ENST00000511067 AP1G2O75843 785 aa10.82□□□□□ -0.68
CHD1-206ENST00000511067 USP17L8P0C7I0 530 aa10.82□□□□□ -0.68
CHD1-206ENST00000511067 GUCA2AQ02747 115 aa10.82□□□□□ -0.68
CHD1-206ENST00000511067 MTMR14Q8NCE2 650 aa10.82□□□□□ -0.68
CHD1-206ENST00000511067 HLA-CQ95604 372 aa10.82□□□□□ -0.68
CHD1-206ENST00000511067 COG6Q9Y2V7 657 aa10.82□□□□□ -0.68
CHD1-206ENST00000511067 HOMEZQ8IX15 550 aa10.81□□□□□ -0.68
CHD1-206ENST00000511067 FNBP4Q8N3X1 1017 aaPredicted RBP10.81□□□□□ -0.68
CHD1-206ENST00000511067 POM121Q96HA1 1249 aa10.81□□□□□ -0.68
CHD1-206ENST00000511067 PRM3Q9NNZ6 103 aa10.81□□□□□ -0.68
CHD1-206ENST00000511067 ACTN4O43707 911 aaKnown RBP10.8□□□□□ -0.68
CHD1-206ENST00000511067 PPP4CP60510 307 aa10.8□□□□□ -0.68
CHD1-206ENST00000511067 IFFO2Q5TF58 517 aa10.79□□□□□ -0.68
CHD1-206ENST00000511067 HELBQ8NG08 1087 aaPredicted RBP10.79□□□□□ -0.68
CHD1-206ENST00000511067 MORN1Q5T089 497 aa10.78□□□□□ -0.68
CHD1-206ENST00000511067 C1orf115Q9H7X2 142 aa10.78□□□□□ -0.68
CHD1-206ENST00000511067 C6orf229H3BNL8 230 aa10.77□□□□□ -0.69
CHD1-206ENST00000511067 Q3C1V9 767 aa10.77□□□□□ -0.69
CHD1-206ENST00000511067 WWC1Q8IX03 1113 aa10.75□□□□□ -0.69
CHD1-206ENST00000511067 ARID3CA6NKF2 412 aa10.74□□□□□ -0.69
CHD1-206ENST00000511067 ITGBL1O95965 494 aaPredicted RBP10.74□□□□□ -0.69
CHD1-206ENST00000511067 RETREG3Q86VR2 466 aa10.74□□□□□ -0.69
CHD1-206ENST00000511067 CFAP99D6REC4 459 aa10.73□□□□□ -0.69
CHD1-206ENST00000511067 GDPD2Q9HCC8 539 aa10.73□□□□□ -0.69
CHD1-206ENST00000511067 KCNC4Q03721 635 aa10.72□□□□□ -0.69
CHD1-206ENST00000511067 CTDSPL2Q05D32 466 aa10.72□□□□□ -0.69
CHD1-206ENST00000511067 GJD4Q96KN9 370 aaPredicted RBP10.72□□□□□ -0.69
CHD1-206ENST00000511067 SLC27A5Q9Y2P5 690 aa10.72□□□□□ -0.69
CHD1-206ENST00000511067 SALL2Q9Y467 1007 aaPredicted RBP10.72□□□□□ -0.69
CHD1-206ENST00000511067 NDUFB9Q9Y6M9 179 aa10.72□□□□□ -0.69
CHD1-206ENST00000511067 A0A0G2JS52 829 aa10.71□□□□□ -0.69
CHD1-206ENST00000511067 DESI1Q6ICB0 168 aa10.71□□□□□ -0.69
CHD1-206ENST00000511067 PRR7Q8TB68 274 aa10.71□□□□□ -0.69
CHD1-206ENST00000511067 APLP1P51693 650 aa10.7□□□□□ -0.7
CHD1-206ENST00000511067 PUS10Q3MIT2 529 aaKnown RBP10.7□□□□□ -0.7
CHD1-206ENST00000511067 TBC1D2BQ9UPU7 963 aa10.7□□□□□ -0.7
CHD1-206ENST00000511067 ZNF330Q9Y3S2 320 aaPredicted RBP10.7□□□□□ -0.7
CHD1-206ENST00000511067 TSC1Q92574 1164 aa10.69□□□□□ -0.7
CHD1-206ENST00000511067 NR1I2O75469 434 aa10.68□□□□□ -0.7
CHD1-206ENST00000511067 ABL2P42684 1182 aa10.68□□□□□ -0.7
CHD1-206ENST00000511067 SYMPKQ92797 1274 aaKnown RBP10.68□□□□□ -0.7
CHD1-206ENST00000511067 HMX1Q9NP08 348 aaPredicted RBP10.68□□□□□ -0.7
CHD1-206ENST00000511067 PCDHB3Q9Y5E6 796 aa10.68□□□□□ -0.7
CHD1-206ENST00000511067 CCDC82Q8N4S0 544 aa10.67□□□□□ -0.7
CHD1-206ENST00000511067 TRIM34Q9BYJ4 488 aa10.67□□□□□ -0.7
CHD1-206ENST00000511067 ZNF777Q9ULD5 760 aaPredicted RBP10.67□□□□□ -0.7
CHD1-206ENST00000511067 LRRN4Q8WUT4 740 aa10.66□□□□□ -0.7
CHD1-206ENST00000511067 USB1Q9BQ65 265 aaKnown RBP10.66□□□□□ -0.7
CHD1-206ENST00000511067 BRICD5Q6PL45 260 aa10.65□□□□□ -0.7
CHD1-206ENST00000511067 BLOC1S3Q6QNY0 202 aa10.65□□□□□ -0.7
CHD1-206ENST00000511067 RNF19BQ6ZMZ0 732 aa10.65□□□□□ -0.7
CHD1-206ENST00000511067 ARID3AQ99856 593 aa10.65□□□□□ -0.7
CHD1-206ENST00000511067 SERPINA10Q9UK55 444 aa10.65□□□□□ -0.7
CHD1-206ENST00000511067 RGS20O76081 388 aa10.64□□□□□ -0.71
CHD1-206ENST00000511067 FMNL1O95466 1100 aaPredicted RBP10.64□□□□□ -0.71
CHD1-206ENST00000511067 SCUBE3Q8IX30 993 aa10.64□□□□□ -0.71
CHD1-206ENST00000511067 WASHC4Q2M389 1173 aa10.63□□□□□ -0.71
CHD1-206ENST00000511067 THAP11Q96EK4 314 aa10.63□□□□□ -0.71
CHD1-206ENST00000511067 CCDC97Q96F63 343 aaPredicted RBP10.63□□□□□ -0.71
CHD1-206ENST00000511067 MTRQ99707 1265 aa10.63□□□□□ -0.71
CHD1-206ENST00000511067 GPR37L1O60883 481 aa10.62□□□□□ -0.71
CHD1-206ENST00000511067 TJAP1Q5JTD0 557 aa10.62□□□□□ -0.71
CHD1-206ENST00000511067 LYPD8Q6UX82 237 aa10.62□□□□□ -0.71
CHD1-206ENST00000511067 IL21Q9HBE4 155 aa10.62□□□□□ -0.71
CHD1-206ENST00000511067 PER1O15534 1290 aaPredicted RBP10.61□□□□□ -0.71
CHD1-206ENST00000511067 IRF5Q13568 498 aa10.61□□□□□ -0.71
CHD1-206ENST00000511067 PNMA1Q8ND90 353 aa10.61□□□□□ -0.71
CHD1-206ENST00000511067 MSS51Q4VC12 460 aa10.59□□□□□ -0.71
CHD1-206ENST00000511067 JUNDP17535 347 aa10.58□□□□□ -0.72
CHD1-206ENST00000511067 PTPRNQ16849 979 aa10.58□□□□□ -0.72
CHD1-206ENST00000511067 NR6A1Q15406 480 aa10.57□□□□□ -0.72
CHD1-206ENST00000511067 EPS8L1Q8TE68 723 aa10.57□□□□□ -0.72
CHD1-206ENST00000511067 POM121CA8CG34 1229 aa10.56□□□□□ -0.72
CHD1-206ENST00000511067 COPS2P61201 443 aa10.56□□□□□ -0.72
CHD1-206ENST00000511067 GLMNQ92990 594 aa10.56□□□□□ -0.72
CHD1-206ENST00000511067 CALR3Q96L12 384 aaKnown RBP10.56□□□□□ -0.72
CHD1-206ENST00000511067 F12P00748 615 aaPredicted RBP10.54□□□□□ -0.72
CHD1-206ENST00000511067 ZNF516Q92618 1163 aa10.54□□□□□ -0.72
CHD1-206ENST00000511067 SPSB2Q99619 263 aa10.54□□□□□ -0.72
CHD1-206ENST00000511067 ZC3H4Q9UPT8 1303 aaKnown RBP10.54□□□□□ -0.72
CHD1-206ENST00000511067 DXOO77932 396 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms