RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 STK26Q9P289 416 aa23.19■■□□□ 1.3
SCAMP1-203ENST00000510030 XRN1Q8IZH2 1706 aaKnown RBP23.19■■□□□ 1.3
SCAMP1-203ENST00000510030 PUS7Q96PZ0 661 aaKnown RBP23.18■■□□□ 1.3
SCAMP1-203ENST00000510030 SLC26A8Q96RN1 970 aa23.18■■□□□ 1.3
SCAMP1-203ENST00000510030 SENP3Q9H4L4 574 aaPredicted RBP23.17■■□□□ 1.3
SCAMP1-203ENST00000510030 EVC2Q86UK5 1308 aa23.16■■□□□ 1.3
SCAMP1-203ENST00000510030 HSPA1LP34931 641 aa23.16■■□□□ 1.3
SCAMP1-203ENST00000510030 CHD2O14647 1828 aaKnown RBP23.15■■□□□ 1.3
SCAMP1-203ENST00000510030 PRAM1Q96QH2 718 aa23.15■■□□□ 1.3
SCAMP1-203ENST00000510030 C11orf95C9JLR9 678 aaPredicted RBP23.12■■□□□ 1.29
SCAMP1-203ENST00000510030 DDX10Q13206 875 aaKnown RBP23.12■■□□□ 1.29
SCAMP1-203ENST00000510030 ADGRB2O60241 1585 aa23.11■■□□□ 1.29
SCAMP1-203ENST00000510030 NWD1Q149M9 1564 aa23.11■■□□□ 1.29
SCAMP1-203ENST00000510030 LRRC7Q96NW7 1537 aa23.1■■□□□ 1.29
SCAMP1-203ENST00000510030 AMOTL2Q9Y2J4 779 aa23.1■■□□□ 1.29
SCAMP1-203ENST00000510030 NINLQ9Y2I6 1382 aa23.1■■□□□ 1.29
SCAMP1-203ENST00000510030 PTPRUQ92729 1446 aa23.09■■□□□ 1.29
SCAMP1-203ENST00000510030 POLR3GLQ9BT43 218 aa23.08■■□□□ 1.29
SCAMP1-203ENST00000510030 NKTRP30414 1462 aaKnown RBP23.08■■□□□ 1.29
SCAMP1-203ENST00000510030 TULP4Q9NRJ4 1543 aa23.08■■□□□ 1.28
SCAMP1-203ENST00000510030 ATAD2Q6PL18 1390 aa23.07■■□□□ 1.28
SCAMP1-203ENST00000510030 ROBO2Q9HCK4 1378 aa23.06■■□□□ 1.28
SCAMP1-203ENST00000510030 TOM1O60784 492 aa23.05■■□□□ 1.28
SCAMP1-203ENST00000510030 KCNA6P17658 529 aa23.04■■□□□ 1.28
SCAMP1-203ENST00000510030 MYOM1P52179 1685 aa23.03■■□□□ 1.28
SCAMP1-203ENST00000510030 SOCS7O14512 581 aa23.03■■□□□ 1.28
SCAMP1-203ENST00000510030 MINK1Q8N4C8 1332 aaPredicted RBP23.03■■□□□ 1.28
SCAMP1-203ENST00000510030 MED1Q15648 1581 aaPredicted RBP23.02■■□□□ 1.28
SCAMP1-203ENST00000510030 SAFB2Q14151 953 aaKnown RBP eCLIP23.02■■□□□ 1.28
SCAMP1-203ENST00000510030 WAPLQ7Z5K2 1190 aa23.01■■□□□ 1.27
SCAMP1-203ENST00000510030 PLEKHH1Q9ULM0 1364 aa23.01■■□□□ 1.27
SCAMP1-203ENST00000510030 SRPK2P78362 688 aaKnown RBP23■■□□□ 1.27
SCAMP1-203ENST00000510030 RBM33Q96EV2 1170 aaKnown RBP22.99■■□□□ 1.27
SCAMP1-203ENST00000510030 XIRP1Q702N8 1843 aaKnown RBP22.98■■□□□ 1.27
SCAMP1-203ENST00000510030 ANP32CO43423 234 aa22.98■■□□□ 1.27
SCAMP1-203ENST00000510030 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.97■■□□□ 1.27
SCAMP1-203ENST00000510030 WASLO00401 505 aaPredicted RBP22.97■■□□□ 1.27
SCAMP1-203ENST00000510030 NCOA3Q9Y6Q9 1424 aa22.97■■□□□ 1.27
SCAMP1-203ENST00000510030 CDC42BPGQ6DT37 1551 aa22.97■■□□□ 1.27
SCAMP1-203ENST00000510030 KTN1Q86UP2 1357 aaKnown RBP22.95■■□□□ 1.26
SCAMP1-203ENST00000510030 CDK19Q9BWU1 502 aa22.95■■□□□ 1.26
SCAMP1-203ENST00000510030 ITSN1Q15811 1721 aa22.94■■□□□ 1.26
SCAMP1-203ENST00000510030 ADGRL3Q9HAR2 1447 aa22.93■■□□□ 1.26
SCAMP1-203ENST00000510030 ATP7BP35670 1465 aa22.92■■□□□ 1.26
SCAMP1-203ENST00000510030 ANKARQ7Z5J8 1434 aa22.91■■□□□ 1.26
SCAMP1-203ENST00000510030 NALCNQ8IZF0 1738 aa22.91■■□□□ 1.26
SCAMP1-203ENST00000510030 CABP2Q9NPB3 220 aa22.91■■□□□ 1.26
SCAMP1-203ENST00000510030 TERF2IPQ9NYB0 399 aa22.91■■□□□ 1.26
SCAMP1-203ENST00000510030 ANKRD36BQ8N2N9 1353 aa22.9■■□□□ 1.26
SCAMP1-203ENST00000510030 TMC1Q8TDI8 760 aa22.9■■□□□ 1.26
SCAMP1-203ENST00000510030 FMN2Q9NZ56 1722 aa22.89■■□□□ 1.26
SCAMP1-203ENST00000510030 PANK3Q9H999 370 aa22.89■■□□□ 1.25
SCAMP1-203ENST00000510030 KNSTRNQ9Y448 316 aa22.89■■□□□ 1.25
SCAMP1-203ENST00000510030 USP32Q8NFA0 1604 aa22.89■■□□□ 1.25
SCAMP1-203ENST00000510030 TOPAZ1Q8N9V7 1692 aa22.88■■□□□ 1.25
SCAMP1-203ENST00000510030 TMEM94Q12767 1356 aa22.88■■□□□ 1.25
SCAMP1-203ENST00000510030 PROSER2Q86WR7 435 aaPredicted RBP22.87■■□□□ 1.25
SCAMP1-203ENST00000510030 CCDC61Q9Y6R9 512 aa22.87■■□□□ 1.25
SCAMP1-203ENST00000510030 DCCP43146 1447 aa22.87■■□□□ 1.25
SCAMP1-203ENST00000510030 NPC1L1Q9UHC9 1359 aa22.87■■□□□ 1.25
SCAMP1-203ENST00000510030 HDGFL2Q7Z4V5 671 aaPredicted RBP22.86■■□□□ 1.25
SCAMP1-203ENST00000510030 C14orf37Q86TY3 774 aa22.85■■□□□ 1.25
SCAMP1-203ENST00000510030 PPIP5K1Q6PFW1 1433 aa22.84■■□□□ 1.25
SCAMP1-203ENST00000510030 NUDT16Q96DE0 195 aaKnown RBP22.84■■□□□ 1.25
SCAMP1-203ENST00000510030 PER1O15534 1290 aaPredicted RBP22.83■■□□□ 1.25
SCAMP1-203ENST00000510030 NSD2O96028 1365 aa22.82■■□□□ 1.24
SCAMP1-203ENST00000510030 RALBP1Q15311 655 aa22.82■■□□□ 1.24
SCAMP1-203ENST00000510030 SLC12A5Q9H2X9 1139 aa22.82■■□□□ 1.24
SCAMP1-203ENST00000510030 MIER1Q8N108 512 aa22.81■■□□□ 1.24
SCAMP1-203ENST00000510030 C19orf44Q9H6X5 657 aa22.81■■□□□ 1.24
SCAMP1-203ENST00000510030 PRKRIP1Q9H875 184 aaPredicted RBP22.8■■□□□ 1.24
SCAMP1-203ENST00000510030 A0A1W2PP64 1363 aa22.79■■□□□ 1.24
SCAMP1-203ENST00000510030 CCER2I3L3R5 266 aa22.79■■□□□ 1.24
SCAMP1-203ENST00000510030 ZNF692Q9BU19 519 aaPredicted RBP22.79■■□□□ 1.24
SCAMP1-203ENST00000510030 CGNL1Q0VF96 1302 aa22.79■■□□□ 1.24
SCAMP1-203ENST00000510030 AKAP12Q02952 1782 aa22.78■■□□□ 1.24
SCAMP1-203ENST00000510030 PHF23Q9BUL5 403 aaPredicted RBP22.78■■□□□ 1.24
SCAMP1-203ENST00000510030 NSD3Q9BZ95 1437 aa22.78■■□□□ 1.24
SCAMP1-203ENST00000510030 CABP1Q9NZU7 370 aa22.78■■□□□ 1.24
SCAMP1-203ENST00000510030 MSH6P52701 1360 aa22.77■■□□□ 1.24
SCAMP1-203ENST00000510030 MON2Q7Z3U7 1717 aa22.77■■□□□ 1.24
SCAMP1-203ENST00000510030 CPSF1Q10570 1443 aaKnown RBP22.76■■□□□ 1.23
SCAMP1-203ENST00000510030 PLEKHG3A1L390 1219 aa22.76■■□□□ 1.23
SCAMP1-203ENST00000510030 CD163L1Q9NR16 1453 aa22.76■■□□□ 1.23
SCAMP1-203ENST00000510030 ROBO1Q9Y6N7 1651 aa22.76■■□□□ 1.23
SCAMP1-203ENST00000510030 EDC4Q6P2E9 1401 aaKnown RBP22.75■■□□□ 1.23
SCAMP1-203ENST00000510030 PRR36Q9H6K5 1346 aa22.75■■□□□ 1.23
SCAMP1-203ENST00000510030 BRD4O60885 1362 aaPredicted RBP22.75■■□□□ 1.23
SCAMP1-203ENST00000510030 PARD3Q8TEW0 1356 aa22.75■■□□□ 1.23
SCAMP1-203ENST00000510030 ATF3P18847 181 aa22.74■■□□□ 1.23
SCAMP1-203ENST00000510030 CADPS2Q86UW7 1296 aa22.74■■□□□ 1.23
SCAMP1-203ENST00000510030 KIF1AQ12756 1690 aa22.74■■□□□ 1.23
SCAMP1-203ENST00000510030 AMER1Q5JTC6 1135 aaPredicted RBP22.73■■□□□ 1.23
SCAMP1-203ENST00000510030 RGS17Q9UGC6 210 aaPredicted RBP22.72■■□□□ 1.23
SCAMP1-203ENST00000510030 POLR3AO14802 1390 aaPredicted RBP22.72■■□□□ 1.23
SCAMP1-203ENST00000510030 ANKRD26Q9UPS8 1709 aa22.71■■□□□ 1.23
SCAMP1-203ENST00000510030 KIF20BQ96Q89 1820 aa22.71■■□□□ 1.23
SCAMP1-203ENST00000510030 CARD14Q9BXL6 1004 aa22.71■■□□□ 1.23
SCAMP1-203ENST00000510030 RGPD8O14715 1765 aaPredicted RBP22.71■■□□□ 1.23
SCAMP1-203ENST00000510030 MYBBP1AQ9BQG0 1328 aaKnown RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms