RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 SPHKAPQ2M3C7 1700 aa10.05□□□□□ -0.8
CAST-228ENST00000509903 TRIM66O15016 1216 aa10.05□□□□□ -0.8
CAST-228ENST00000509903 INO80Q9ULG1 1556 aaPredicted RBP10.05□□□□□ -0.8
CAST-228ENST00000509903 PDE4DQ08499 809 aa10.04□□□□□ -0.8
CAST-228ENST00000509903 TET3O43151 1660 aa10.04□□□□□ -0.8
CAST-228ENST00000509903 SCAPERQ9BY12 1400 aa10.04□□□□□ -0.8
CAST-228ENST00000509903 MADDQ8WXG6 1647 aa10.04□□□□□ -0.8
CAST-228ENST00000509903 SENP3-EIF4A1A0A087X0R7 540 aa10.04□□□□□ -0.8
CAST-228ENST00000509903 KIF3BO15066 747 aa10.04□□□□□ -0.8
CAST-228ENST00000509903 PDIA4P13667 645 aaKnown RBP10.04□□□□□ -0.8
CAST-228ENST00000509903 C1QBPQ07021 282 aaKnown RBP10.04□□□□□ -0.8
CAST-228ENST00000509903 STAC3Q96MF2 364 aa10.04□□□□□ -0.8
CAST-228ENST00000509903 PCDHB8Q9UN66 801 aa10.04□□□□□ -0.8
CAST-228ENST00000509903 PCDHB13Q9Y5F0 798 aa10.04□□□□□ -0.8
CAST-228ENST00000509903 WASHC2CQ9Y4E1 1318 aa10.04□□□□□ -0.8
CAST-228ENST00000509903 CEP152O94986 1710 aa10.03□□□□□ -0.8
CAST-228ENST00000509903 PTPRTO14522 1441 aa10.03□□□□□ -0.8
CAST-228ENST00000509903 PER1O15534 1290 aaPredicted RBP10.03□□□□□ -0.8
CAST-228ENST00000509903 CCDC82Q8N4S0 544 aa10.03□□□□□ -0.8
CAST-228ENST00000509903 KRI1Q8N9T8 703 aaKnown RBP10.03□□□□□ -0.8
CAST-228ENST00000509903 ASXL2Q76L83 1435 aa10.03□□□□□ -0.8
CAST-228ENST00000509903 CC2D1BQ5T0F9 858 aaKnown RBP10.02□□□□□ -0.8
CAST-228ENST00000509903 B4GALNT3Q6L9W6 998 aa10.02□□□□□ -0.8
CAST-228ENST00000509903 PANK3Q9H999 370 aa10.02□□□□□ -0.8
CAST-228ENST00000509903 CLTCL1P53675 1640 aa10.02□□□□□ -0.81
CAST-228ENST00000509903 CLUAP1Q96AJ1 413 aa10.02□□□□□ -0.81
CAST-228ENST00000509903 PLEKHG3A1L390 1219 aa10.01□□□□□ -0.81
CAST-228ENST00000509903 CCDC9Q9Y3X0 531 aaKnown RBP10.01□□□□□ -0.81
CAST-228ENST00000509903 VWDEQ8N2E2 1590 aa10□□□□□ -0.81
CAST-228ENST00000509903 CDCA8Q53HL2 280 aa10□□□□□ -0.81
CAST-228ENST00000509903 SCAF11Q99590 1463 aaKnown RBP10□□□□□ -0.81
CAST-228ENST00000509903 IQGAP1P46940 1657 aa10□□□□□ -0.81
CAST-228ENST00000509903 ZBTB7CA1YPR0 619 aa9.99□□□□□ -0.81
CAST-228ENST00000509903 EIF3AQ14152 1382 aaKnown RBP9.99□□□□□ -0.81
CAST-228ENST00000509903 RNF123Q5XPI4 1314 aa9.99□□□□□ -0.81
CAST-228ENST00000509903 LARP6Q9BRS8 491 aaKnown RBP9.99□□□□□ -0.81
CAST-228ENST00000509903 RIMBP3CA6NJZ7 1639 aa9.99□□□□□ -0.81
CAST-228ENST00000509903 RIMBP3BA6NNM3 1639 aa9.99□□□□□ -0.81
CAST-228ENST00000509903 RIMBP3Q9UFD9 1639 aa9.99□□□□□ -0.81
CAST-228ENST00000509903 ZNF518AQ6AHZ1 1483 aa9.98□□□□□ -0.81
CAST-228ENST00000509903 GPIHBP1Q8IV16 184 aa9.98□□□□□ -0.81
CAST-228ENST00000509903 KNSTRNQ9Y448 316 aa9.98□□□□□ -0.81
CAST-228ENST00000509903 SALL2Q9Y467 1007 aaPredicted RBP9.98□□□□□ -0.81
CAST-228ENST00000509903 MROH1Q8NDA8 1641 aa9.97□□□□□ -0.81
CAST-228ENST00000509903 PDE3BQ13370 1112 aa9.97□□□□□ -0.81
CAST-228ENST00000509903 FBXO22Q8NEZ5 403 aa9.97□□□□□ -0.81
CAST-228ENST00000509903 NEURL4Q96JN8 1562 aa9.97□□□□□ -0.81
CAST-228ENST00000509903 EFCAB6Q5THR3 1501 aa9.96□□□□□ -0.81
CAST-228ENST00000509903 KIDINS220Q9ULH0 1771 aa9.96□□□□□ -0.81
CAST-228ENST00000509903 CCDC136Q96JN2 1154 aa9.96□□□□□ -0.82
CAST-228ENST00000509903 ANP32EQ9BTT0 268 aa9.96□□□□□ -0.82
CAST-228ENST00000509903 KIAA1210Q9ULL0 1709 aa9.96□□□□□ -0.82
CAST-228ENST00000509903 INSRP06213 1382 aa9.95□□□□□ -0.82
CAST-228ENST00000509903 KIF1BO60333 1816 aa9.95□□□□□ -0.82
CAST-228ENST00000509903 SYNMO15061 1565 aa9.95□□□□□ -0.82
CAST-228ENST00000509903 UGGT1Q9NYU2 1555 aa9.95□□□□□ -0.82
CAST-228ENST00000509903 ZMYM4Q5VZL5 1548 aa9.95□□□□□ -0.82
CAST-228ENST00000509903 CLEC11AQ9Y240 323 aa9.95□□□□□ -0.82
CAST-228ENST00000509903 MYOM2P54296 1465 aa9.95□□□□□ -0.82
CAST-228ENST00000509903 CFAP74Q9C0B2 1584 aa9.95□□□□□ -0.82
CAST-228ENST00000509903 CD109Q6YHK3 1445 aa9.94□□□□□ -0.82
CAST-228ENST00000509903 PHF8Q9UPP1 1060 aa9.94□□□□□ -0.82
CAST-228ENST00000509903 MAP3K4Q9Y6R4 1608 aa9.94□□□□□ -0.82
CAST-228ENST00000509903 BLMP54132 1417 aaPredicted RBP9.94□□□□□ -0.82
CAST-228ENST00000509903 PPRC1Q5VV67 1664 aaKnown RBP9.94□□□□□ -0.82
CAST-228ENST00000509903 ONECUT3O60422 494 aaPredicted RBP9.94□□□□□ -0.82
CAST-228ENST00000509903 SMYD5Q6GMV2 418 aa9.94□□□□□ -0.82
CAST-228ENST00000509903 RCAN3Q9UKA8 241 aa9.94□□□□□ -0.82
CAST-228ENST00000509903 RRP1P56182 461 aaKnown RBP9.93□□□□□ -0.82
CAST-228ENST00000509903 CFAP70Q5T0N1 1121 aa9.93□□□□□ -0.82
CAST-228ENST00000509903 ILDR1Q86SU0 546 aaPredicted RBP9.93□□□□□ -0.82
CAST-228ENST00000509903 LMTK2Q8IWU2 1503 aa9.93□□□□□ -0.82
CAST-228ENST00000509903 POGZQ7Z3K3 1410 aa9.93□□□□□ -0.82
CAST-228ENST00000509903 FANCIQ9NVI1 1328 aa9.93□□□□□ -0.82
CAST-228ENST00000509903 ABCA6Q8N139 1617 aa9.93□□□□□ -0.82
CAST-228ENST00000509903 ADGRF5Q8IZF2 1346 aa9.92□□□□□ -0.82
CAST-228ENST00000509903 KDM5AP29375 1690 aaKnown RBP9.92□□□□□ -0.82
CAST-228ENST00000509903 WDR43Q15061 677 aaKnown RBP eCLIP9.92□□□□□ -0.82
CAST-228ENST00000509903 ASXL1Q8IXJ9 1541 aa9.91□□□□□ -0.82
CAST-228ENST00000509903 PPP2R1AP30153 589 aa9.91□□□□□ -0.82
CAST-228ENST00000509903 PDAP1Q13442 181 aaKnown RBP9.91□□□□□ -0.82
CAST-228ENST00000509903 EFCAB3Q8N7B9 438 aa9.91□□□□□ -0.82
CAST-228ENST00000509903 ZNF428Q96B54 188 aa9.91□□□□□ -0.82
CAST-228ENST00000509903 GGT6Q6P531 493 aa9.91□□□□□ -0.82
CAST-228ENST00000509903 MLH3Q9UHC1 1453 aa9.91□□□□□ -0.82
CAST-228ENST00000509903 HECW2Q9P2P5 1572 aa9.9□□□□□ -0.82
CAST-228ENST00000509903 MROH2AA6NES4 1674 aa9.9□□□□□ -0.82
CAST-228ENST00000509903 CDCA7LQ96GN5 454 aa9.9□□□□□ -0.82
CAST-228ENST00000509903 TSPYL2Q9H2G4 693 aaPredicted RBP9.9□□□□□ -0.82
CAST-228ENST00000509903 IFT172Q9UG01 1749 aa9.9□□□□□ -0.82
CAST-228ENST00000509903 MYOM1P52179 1685 aa9.9□□□□□ -0.83
CAST-228ENST00000509903 KCTD17Q8N5Z5 321 aa9.9□□□□□ -0.83
CAST-228ENST00000509903 ADAMTS8Q9UP79 889 aa9.9□□□□□ -0.83
CAST-228ENST00000509903 NOS1P29475 1434 aa9.89□□□□□ -0.83
CAST-228ENST00000509903 ADGRB3O60242 1522 aa9.89□□□□□ -0.83
CAST-228ENST00000509903 NPC1L1Q9UHC9 1359 aa9.89□□□□□ -0.83
CAST-228ENST00000509903 NPATQ14207 1427 aa9.89□□□□□ -0.83
CAST-228ENST00000509903 FRMPD1Q5SYB0 1578 aa9.88□□□□□ -0.83
CAST-228ENST00000509903 PRR29P0C7W0 189 aa9.88□□□□□ -0.83
CAST-228ENST00000509903 PIK3C2GO75747 1445 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms