RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-223ENST00000509900 NOS1P29475 1434 aa15.56■□□□□ 0.08
PTPN20-223ENST00000509900 DCCP43146 1447 aa15.56■□□□□ 0.08
PTPN20-223ENST00000509900 BLMP54132 1417 aaPredicted RBP15.56■□□□□ 0.08
PTPN20-223ENST00000509900 MST1RQ04912 1400 aa15.56■□□□□ 0.08
PTPN20-223ENST00000509900 ADAMTS13Q76LX8 1427 aa15.55■□□□□ 0.08
PTPN20-223ENST00000509900 DEFB132Q7Z7B7 95 aa15.55■□□□□ 0.08
PTPN20-223ENST00000509900 LMTK2Q8IWU2 1503 aa15.53■□□□□ 0.08
PTPN20-223ENST00000509900 BCL9LQ86UU0 1499 aa15.53■□□□□ 0.08
PTPN20-223ENST00000509900 RIMS2Q9UQ26 1411 aa15.53■□□□□ 0.08
PTPN20-223ENST00000509900 FNBP4Q8N3X1 1017 aaPredicted RBP15.53■□□□□ 0.08
PTPN20-223ENST00000509900 MARF1Q9Y4F3 1742 aaKnown RBP15.53■□□□□ 0.08
PTPN20-223ENST00000509900 TMEM131LA2VDJ0 1609 aa15.52■□□□□ 0.08
PTPN20-223ENST00000509900 LAMC1P11047 1609 aa15.51■□□□□ 0.07
PTPN20-223ENST00000509900 GABBR2O75899 941 aa15.51■□□□□ 0.07
PTPN20-223ENST00000509900 HRCP23327 699 aa15.51■□□□□ 0.07
PTPN20-223ENST00000509900 ERBINQ96RT1 1412 aa15.51■□□□□ 0.07
PTPN20-223ENST00000509900 PIK3R4Q99570 1358 aa15.5■□□□□ 0.07
PTPN20-223ENST00000509900 TRPM2O94759 1503 aa15.5■□□□□ 0.07
PTPN20-223ENST00000509900 PPP1R15AO75807 674 aaPredicted RBP15.5■□□□□ 0.07
PTPN20-223ENST00000509900 PTPRUQ92729 1446 aa15.5■□□□□ 0.07
PTPN20-223ENST00000509900 SPHKAPQ2M3C7 1700 aa15.49■□□□□ 0.07
PTPN20-223ENST00000509900 XRN1Q8IZH2 1706 aaKnown RBP15.49■□□□□ 0.07
PTPN20-223ENST00000509900 PSDA5PKW4 1024 aaPredicted RBP15.49■□□□□ 0.07
PTPN20-223ENST00000509900 CD44P16070 742 aaKnown RBP15.49■□□□□ 0.07
PTPN20-223ENST00000509900 YY1P25490 414 aa15.49■□□□□ 0.07
PTPN20-223ENST00000509900 SLC52A1Q9NWF4 448 aa15.49■□□□□ 0.07
PTPN20-223ENST00000509900 PTCH1Q13635 1447 aa15.49■□□□□ 0.07
PTPN20-223ENST00000509900 UNC13BO14795 1591 aa15.49■□□□□ 0.07
PTPN20-223ENST00000509900 KIF15Q9NS87 1388 aa15.49■□□□□ 0.07
PTPN20-223ENST00000509900 COL22A1Q8NFW1 1626 aaPredicted RBP15.48■□□□□ 0.07
PTPN20-223ENST00000509900 IFFO2Q5TF58 517 aa15.48■□□□□ 0.07
PTPN20-223ENST00000509900 KANK1Q14678 1352 aa15.48■□□□□ 0.07
PTPN20-223ENST00000509900 CROCC2H7BZ55 1655 aa15.48■□□□□ 0.07
PTPN20-223ENST00000509900 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.47■□□□□ 0.07
PTPN20-223ENST00000509900 GLI3P10071 1580 aa15.46■□□□□ 0.07
PTPN20-223ENST00000509900 AMOTL2Q9Y2J4 779 aa15.46■□□□□ 0.07
PTPN20-223ENST00000509900 NALCNQ8IZF0 1738 aa15.46■□□□□ 0.06
PTPN20-223ENST00000509900 GJD4Q96KN9 370 aaPredicted RBP15.44■□□□□ 0.06
PTPN20-223ENST00000509900 HDGFP51858 240 aaKnown RBP15.43■□□□□ 0.06
PTPN20-223ENST00000509900 RRP7BPQ9NSQ0 103 aa15.42■□□□□ 0.06
PTPN20-223ENST00000509900 SOS2Q07890 1332 aaPredicted RBP15.42■□□□□ 0.06
PTPN20-223ENST00000509900 SF3B2Q13435 895 aaKnown RBP15.41■□□□□ 0.06
PTPN20-223ENST00000509900 CREBZFQ9NS37 354 aa15.41■□□□□ 0.06
PTPN20-223ENST00000509900 MYOM2P54296 1465 aa15.4■□□□□ 0.06
PTPN20-223ENST00000509900 NRXN3Q9Y4C0 1643 aa15.4■□□□□ 0.06
PTPN20-223ENST00000509900 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.4■□□□□ 0.06
PTPN20-223ENST00000509900 ADGRL3Q9HAR2 1447 aa15.4■□□□□ 0.06
PTPN20-223ENST00000509900 RALGAPBQ86X10 1494 aa15.4■□□□□ 0.06
PTPN20-223ENST00000509900 MYOM3Q5VTT5 1437 aa15.39■□□□□ 0.05
PTPN20-223ENST00000509900 RPRD2Q5VT52 1461 aaKnown RBP15.39■□□□□ 0.05
PTPN20-223ENST00000509900 C1orf167Q5SNV9 1468 aa15.38■□□□□ 0.05
PTPN20-223ENST00000509900 ABCC5O15440 1437 aa15.35■□□□□ 0.05
PTPN20-223ENST00000509900 R3HDM1Q15032 1099 aaKnown RBP15.33■□□□□ 0.04
PTPN20-223ENST00000509900 ORAI2Q96SN7 254 aa15.33■□□□□ 0.04
PTPN20-223ENST00000509900 SLIT2O94813 1529 aa15.33■□□□□ 0.04
PTPN20-223ENST00000509900 CHGAP10645 457 aaKnown RBP15.32■□□□□ 0.04
PTPN20-223ENST00000509900 BAG6P46379 1132 aa15.32■□□□□ 0.04
PTPN20-223ENST00000509900 PTPN23Q9H3S7 1636 aa15.32■□□□□ 0.04
PTPN20-223ENST00000509900 RGPD1P0DJD0 1748 aa15.31■□□□□ 0.04
PTPN20-223ENST00000509900 SEPT12Q8IYM1 358 aa15.31■□□□□ 0.04
PTPN20-223ENST00000509900 UNC5CLQ8IV45 518 aa15.3■□□□□ 0.04
PTPN20-223ENST00000509900 METP08581 1390 aa15.29■□□□□ 0.04
PTPN20-223ENST00000509900 TNS1Q9HBL0 1735 aaKnown RBP15.28■□□□□ 0.04
PTPN20-223ENST00000509900 E9PCH4 1651 aa15.28■□□□□ 0.04
PTPN20-223ENST00000509900 PXDNQ92626 1479 aa15.27■□□□□ 0.04
PTPN20-223ENST00000509900 DAPK1P53355 1430 aa15.27■□□□□ 0.04
PTPN20-223ENST00000509900 SENP3-EIF4A1A0A087X0R7 540 aa15.27■□□□□ 0.04
PTPN20-223ENST00000509900 EN1Q05925 392 aaPredicted RBP15.27■□□□□ 0.04
PTPN20-223ENST00000509900 KRT27Q7Z3Y8 459 aa15.27■□□□□ 0.04
PTPN20-223ENST00000509900 CAMTA1Q9Y6Y1 1673 aa15.27■□□□□ 0.03
PTPN20-223ENST00000509900 IQGAP3Q86VI3 1631 aa15.26■□□□□ 0.03
PTPN20-223ENST00000509900 PLCH1Q4KWH8 1693 aa15.25■□□□□ 0.03
PTPN20-223ENST00000509900 ONECUT3O60422 494 aaPredicted RBP15.25■□□□□ 0.03
PTPN20-223ENST00000509900 USP32Q8NFA0 1604 aa15.25■□□□□ 0.03
PTPN20-223ENST00000509900 NWD2Q9ULI1 1742 aa15.24■□□□□ 0.03
PTPN20-223ENST00000509900 ANKRD30AQ9BXX3 1397 aa15.24■□□□□ 0.03
PTPN20-223ENST00000509900 ZNF579Q8NAF0 562 aaKnown RBP15.22■□□□□ 0.03
PTPN20-223ENST00000509900 DISP2A7MBM2 1401 aa15.22■□□□□ 0.03
PTPN20-223ENST00000509900 CLCN6P51797 869 aa15.21■□□□□ 0.03
PTPN20-223ENST00000509900 ZNF784Q8NCA9 323 aaPredicted RBP15.21■□□□□ 0.03
PTPN20-223ENST00000509900 CHIC2Q9UKJ5 165 aa15.21■□□□□ 0.03
PTPN20-223ENST00000509900 NPHP3Q7Z494 1330 aa15.2■□□□□ 0.02
PTPN20-223ENST00000509900 XPCQ01831 940 aaPredicted RBP15.2■□□□□ 0.02
PTPN20-223ENST00000509900 VPS72Q15906 364 aa15.2■□□□□ 0.02
PTPN20-223ENST00000509900 KANK4Q5T7N3 995 aaPredicted RBP15.2■□□□□ 0.02
PTPN20-223ENST00000509900 ADGRL2O95490 1459 aa15.19■□□□□ 0.02
PTPN20-223ENST00000509900 CHD4Q14839 1912 aa15.19■□□□□ 0.02
PTPN20-223ENST00000509900 RREB1Q92766 1687 aa15.17■□□□□ 0.02
PTPN20-223ENST00000509900 PAK3O75914 559 aaPredicted RBP15.17■□□□□ 0.02
PTPN20-223ENST00000509900 EZH2Q15910 746 aaKnown RBP15.17■□□□□ 0.02
PTPN20-223ENST00000509900 NUP188Q5SRE5 1749 aa15.17■□□□□ 0.02
PTPN20-223ENST00000509900 ROBO2Q9HCK4 1378 aa15.16■□□□□ 0.02
PTPN20-223ENST00000509900 POTEIP0CG38 1075 aa15.16■□□□□ 0.02
PTPN20-223ENST00000509900 C1QTNF8P60827 252 aa15.16■□□□□ 0.02
PTPN20-223ENST00000509900 ABCA3Q99758 1704 aa15.16■□□□□ 0.02
PTPN20-223ENST00000509900 NRAPQ86VF7 1730 aa15.15■□□□□ 0.02
PTPN20-223ENST00000509900 NINLQ9Y2I6 1382 aa15.15■□□□□ 0.02
PTPN20-223ENST00000509900 FOXO3O43524 673 aa15.15■□□□□ 0.02
PTPN20-223ENST00000509900 ESCO1Q5FWF5 840 aa15.14■□□□□ 0.01
PTPN20-223ENST00000509900 FAM182BQ5T319 152 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms