RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 DLC1Q96QB1 1528 aa15.44■□□□□ 0.06
PRPF40B-203ENST00000508736 CEP170BQ9Y4F5 1589 aaPredicted RBP15.44■□□□□ 0.06
PRPF40B-203ENST00000508736 RBM19Q9Y4C8 960 aaKnown RBP15.44■□□□□ 0.06
PRPF40B-203ENST00000508736 USP32Q8NFA0 1604 aa15.43■□□□□ 0.06
PRPF40B-203ENST00000508736 NINLQ9Y2I6 1382 aa15.43■□□□□ 0.06
PRPF40B-203ENST00000508736 RNF123Q5XPI4 1314 aa15.43■□□□□ 0.06
PRPF40B-203ENST00000508736 SETD1AO15047 1707 aaKnown RBP15.43■□□□□ 0.06
PRPF40B-203ENST00000508736 HDGFP51858 240 aaKnown RBP15.42■□□□□ 0.06
PRPF40B-203ENST00000508736 AEBP2Q6ZN18 517 aaPredicted RBP15.42■□□□□ 0.06
PRPF40B-203ENST00000508736 SENP3Q9H4L4 574 aaPredicted RBP15.42■□□□□ 0.06
PRPF40B-203ENST00000508736 UBR1Q8IWV7 1749 aa15.42■□□□□ 0.06
PRPF40B-203ENST00000508736 PPP2R1AP30153 589 aa15.42■□□□□ 0.06
PRPF40B-203ENST00000508736 TMEM2Q9UHN6 1383 aa15.41■□□□□ 0.06
PRPF40B-203ENST00000508736 HSPA2P54652 639 aa15.41■□□□□ 0.06
PRPF40B-203ENST00000508736 TXNDC2Q86VQ3 553 aa15.41■□□□□ 0.06
PRPF40B-203ENST00000508736 CARD14Q9BXL6 1004 aa15.41■□□□□ 0.06
PRPF40B-203ENST00000508736 PDE3BQ13370 1112 aa15.4■□□□□ 0.06
PRPF40B-203ENST00000508736 EID1Q9Y6B2 187 aa15.4■□□□□ 0.06
PRPF40B-203ENST00000508736 BLMP54132 1417 aaPredicted RBP15.39■□□□□ 0.05
PRPF40B-203ENST00000508736 NRXN3Q9Y4C0 1643 aa15.39■□□□□ 0.05
PRPF40B-203ENST00000508736 LTKP29376 864 aa15.39■□□□□ 0.05
PRPF40B-203ENST00000508736 ABCC11Q96J66 1382 aa15.39■□□□□ 0.05
PRPF40B-203ENST00000508736 ZNF142P52746 1687 aaPredicted RBP15.38■□□□□ 0.05
PRPF40B-203ENST00000508736 ANKLE2Q86XL3 938 aa15.38■□□□□ 0.05
PRPF40B-203ENST00000508736 ANKRD36BQ8N2N9 1353 aa15.38■□□□□ 0.05
PRPF40B-203ENST00000508736 ATAD2Q6PL18 1390 aa15.37■□□□□ 0.05
PRPF40B-203ENST00000508736 LMTK3Q96Q04 1460 aa15.37■□□□□ 0.05
PRPF40B-203ENST00000508736 NSD3Q9BZ95 1437 aa15.36■□□□□ 0.05
PRPF40B-203ENST00000508736 PRAM1Q96QH2 718 aa15.36■□□□□ 0.05
PRPF40B-203ENST00000508736 SLC12A5Q9H2X9 1139 aa15.36■□□□□ 0.05
PRPF40B-203ENST00000508736 STK26Q9P289 416 aa15.36■□□□□ 0.05
PRPF40B-203ENST00000508736 NSD2O96028 1365 aa15.36■□□□□ 0.05
PRPF40B-203ENST00000508736 B4GALNT3Q6L9W6 998 aa15.35■□□□□ 0.05
PRPF40B-203ENST00000508736 NCKAP5LQ9HCH0 1330 aa15.35■□□□□ 0.05
PRPF40B-203ENST00000508736 SIRT1Q96EB6 747 aa15.35■□□□□ 0.05
PRPF40B-203ENST00000508736 POGKQ9P215 609 aa15.35■□□□□ 0.05
PRPF40B-203ENST00000508736 KNDC1Q76NI1 1749 aa15.34■□□□□ 0.05
PRPF40B-203ENST00000508736 SLIT1O75093 1534 aa15.34■□□□□ 0.05
PRPF40B-203ENST00000508736 TECPR2O15040 1411 aa15.34■□□□□ 0.05
PRPF40B-203ENST00000508736 ARHGAP23Q9P227 1491 aa15.34■□□□□ 0.05
PRPF40B-203ENST00000508736 CGNL1Q0VF96 1302 aa15.33■□□□□ 0.04
PRPF40B-203ENST00000508736 FAM135BQ49AJ0 1406 aa15.33■□□□□ 0.04
PRPF40B-203ENST00000508736 CABP2Q9NPB3 220 aa15.31■□□□□ 0.04
PRPF40B-203ENST00000508736 POLR3AO14802 1390 aaPredicted RBP15.31■□□□□ 0.04
PRPF40B-203ENST00000508736 PLEKHG1Q9ULL1 1385 aa15.31■□□□□ 0.04
PRPF40B-203ENST00000508736 CCDC136Q96JN2 1154 aa15.31■□□□□ 0.04
PRPF40B-203ENST00000508736 CPS1P31327 1500 aa15.3■□□□□ 0.04
PRPF40B-203ENST00000508736 SRPK2P78362 688 aaKnown RBP15.3■□□□□ 0.04
PRPF40B-203ENST00000508736 SAFB2Q14151 953 aaKnown RBP eCLIP15.3■□□□□ 0.04
PRPF40B-203ENST00000508736 WDR43Q15061 677 aaKnown RBP eCLIP15.3■□□□□ 0.04
PRPF40B-203ENST00000508736 FANCIQ9NVI1 1328 aa15.3■□□□□ 0.04
PRPF40B-203ENST00000508736 METP08581 1390 aa15.3■□□□□ 0.04
PRPF40B-203ENST00000508736 SLC26A8Q96RN1 970 aa15.29■□□□□ 0.04
PRPF40B-203ENST00000508736 RCAN3Q9UKA8 241 aa15.29■□□□□ 0.04
PRPF40B-203ENST00000508736 ADAMTS8Q9UP79 889 aa15.29■□□□□ 0.04
PRPF40B-203ENST00000508736 MINK1Q8N4C8 1332 aaPredicted RBP15.29■□□□□ 0.04
PRPF40B-203ENST00000508736 MED14O60244 1454 aa15.29■□□□□ 0.04
PRPF40B-203ENST00000508736 RRP1P56182 461 aaKnown RBP15.29■□□□□ 0.04
PRPF40B-203ENST00000508736 A0A1W2PP64 1363 aa15.28■□□□□ 0.04
PRPF40B-203ENST00000508736 ADAMTS13Q76LX8 1427 aa15.28■□□□□ 0.04
PRPF40B-203ENST00000508736 MORC1Q86VD1 984 aa15.28■□□□□ 0.04
PRPF40B-203ENST00000508736 ANP32EQ9BTT0 268 aa15.28■□□□□ 0.04
PRPF40B-203ENST00000508736 TERF2IPQ9NYB0 399 aa15.28■□□□□ 0.04
PRPF40B-203ENST00000508736 SENP3-EIF4A1A0A087X0R7 540 aa15.27■□□□□ 0.04
PRPF40B-203ENST00000508736 CDK19Q9BWU1 502 aa15.27■□□□□ 0.04
PRPF40B-203ENST00000508736 CD163L1Q9NR16 1453 aa15.27■□□□□ 0.04
PRPF40B-203ENST00000508736 NPHP4O75161 1426 aaPredicted RBP15.26■□□□□ 0.03
PRPF40B-203ENST00000508736 ATP7BP35670 1465 aa15.26■□□□□ 0.03
PRPF40B-203ENST00000508736 PLEKHH1Q9ULM0 1364 aa15.25■□□□□ 0.03
PRPF40B-203ENST00000508736 SALL2Q9Y467 1007 aaPredicted RBP15.25■□□□□ 0.03
PRPF40B-203ENST00000508736 WAPLQ7Z5K2 1190 aa15.24■□□□□ 0.03
PRPF40B-203ENST00000508736 NGEFQ8N5V2 710 aa15.24■□□□□ 0.03
PRPF40B-203ENST00000508736 ANKRD26Q9UPS8 1709 aa15.23■□□□□ 0.03
PRPF40B-203ENST00000508736 HDGFL2Q7Z4V5 671 aaPredicted RBP15.23■□□□□ 0.03
PRPF40B-203ENST00000508736 TBX22Q9Y458 520 aa15.23■□□□□ 0.03
PRPF40B-203ENST00000508736 DIP2AQ14689 1571 aa15.23■□□□□ 0.03
PRPF40B-203ENST00000508736 WASLO00401 505 aaPredicted RBP15.23■□□□□ 0.03
PRPF40B-203ENST00000508736 ADGRB2O60241 1585 aa15.22■□□□□ 0.03
PRPF40B-203ENST00000508736 STRCQ7RTU9 1775 aa15.22■□□□□ 0.03
PRPF40B-203ENST00000508736 SHPRHQ149N8 1683 aa15.21■□□□□ 0.03
PRPF40B-203ENST00000508736 ZNF521Q96K83 1311 aa15.2■□□□□ 0.02
PRPF40B-203ENST00000508736 DMRT2Q9Y5R5 561 aa15.2■□□□□ 0.02
PRPF40B-203ENST00000508736 CPSF1Q10570 1443 aaKnown RBP15.19■□□□□ 0.02
PRPF40B-203ENST00000508736 CFAP53Q96M91 514 aa15.19■□□□□ 0.02
PRPF40B-203ENST00000508736 CABP1Q9NZU7 370 aa15.19■□□□□ 0.02
PRPF40B-203ENST00000508736 CDCA7LQ96GN5 454 aa15.18■□□□□ 0.02
PRPF40B-203ENST00000508736 ROBO2Q9HCK4 1378 aa15.18■□□□□ 0.02
PRPF40B-203ENST00000508736 FYB1O15117 783 aa15.18■□□□□ 0.02
PRPF40B-203ENST00000508736 MTHFSP49914 203 aa15.17■□□□□ 0.02
PRPF40B-203ENST00000508736 AMOTL2Q9Y2J4 779 aa15.17■□□□□ 0.02
PRPF40B-203ENST00000508736 KIF20BQ96Q89 1820 aa15.17■□□□□ 0.02
PRPF40B-203ENST00000508736 PTCH1Q13635 1447 aa15.17■□□□□ 0.02
PRPF40B-203ENST00000508736 PPIP5K1Q6PFW1 1433 aa15.16■□□□□ 0.02
PRPF40B-203ENST00000508736 CDC42BPGQ6DT37 1551 aa15.16■□□□□ 0.02
PRPF40B-203ENST00000508736 NCBP3Q53F19 620 aaKnown RBP15.16■□□□□ 0.02
PRPF40B-203ENST00000508736 CCDC61Q9Y6R9 512 aa15.16■□□□□ 0.02
PRPF40B-203ENST00000508736 EDC4Q6P2E9 1401 aaKnown RBP15.16■□□□□ 0.02
PRPF40B-203ENST00000508736 PTPRUQ92729 1446 aa15.16■□□□□ 0.02
PRPF40B-203ENST00000508736 PIK3R4Q99570 1358 aa15.15■□□□□ 0.02
PRPF40B-203ENST00000508736 EXOC6Q8TAG9 804 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms