RNA–Protein interactions for RNA: ENST00000508173.5

PDE6A-202, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best)

Gene PDE6A, Length 5,706 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-202ENST00000508173 TMEM87AQ8NBN3 555 aa9.8□□□□□ -0.84
PDE6A-202ENST00000508173 SYAP1Q96A49 352 aaPredicted RBP9.8□□□□□ -0.84
PDE6A-202ENST00000508173 ODF2Q5BJF6 829 aa9.79□□□□□ -0.84
PDE6A-202ENST00000508173 NLRP2Q9NX02 1062 aa9.79□□□□□ -0.84
PDE6A-202ENST00000508173 RUSC2Q8N2Y8 1516 aa9.79□□□□□ -0.84
PDE6A-202ENST00000508173 RWDD1Q9H446 243 aaPredicted RBP9.79□□□□□ -0.84
PDE6A-202ENST00000508173 ZBED9Q6R2W3 1325 aa9.79□□□□□ -0.84
PDE6A-202ENST00000508173 KIF16BQ96L93 1317 aa9.79□□□□□ -0.84
PDE6A-202ENST00000508173 SPDYE4A6NLX3 237 aa9.79□□□□□ -0.84
PDE6A-202ENST00000508173 KIF21BO75037 1637 aa9.79□□□□□ -0.84
PDE6A-202ENST00000508173 PTMSP20962 102 aa9.79□□□□□ -0.84
PDE6A-202ENST00000508173 POLD1P28340 1107 aa9.79□□□□□ -0.84
PDE6A-202ENST00000508173 FOXD4L6Q3SYB3 417 aaPredicted RBP9.79□□□□□ -0.84
PDE6A-202ENST00000508173 FOXD4L3Q6VB84 417 aaPredicted RBP9.79□□□□□ -0.84
PDE6A-202ENST00000508173 GOLGA6L1Q8N7Z2 621 aa9.78□□□□□ -0.84
PDE6A-202ENST00000508173 C9orf78Q9NZ63 289 aaPredicted RBP9.78□□□□□ -0.84
PDE6A-202ENST00000508173 RBM10P98175 930 aaKnown RBP9.78□□□□□ -0.84
PDE6A-202ENST00000508173 TRDNQ13061 729 aa9.78□□□□□ -0.84
PDE6A-202ENST00000508173 SLC52A1Q9NWF4 448 aa9.78□□□□□ -0.84
PDE6A-202ENST00000508173 ZNF771Q7L3S4 317 aaPredicted RBP9.77□□□□□ -0.84
PDE6A-202ENST00000508173 TPM1P09493 284 aa9.77□□□□□ -0.85
PDE6A-202ENST00000508173 L3MBTL2Q969R5 705 aa9.77□□□□□ -0.85
PDE6A-202ENST00000508173 MPHOSPH9Q99550 1183 aa9.77□□□□□ -0.85
PDE6A-202ENST00000508173 PODXL2Q9NZ53 605 aa9.77□□□□□ -0.85
PDE6A-202ENST00000508173 ZRANB1Q9UGI0 708 aa9.77□□□□□ -0.85
PDE6A-202ENST00000508173 PPM1FP49593 454 aaPredicted RBP9.77□□□□□ -0.85
PDE6A-202ENST00000508173 DENND4BO75064 1496 aaPredicted RBP9.77□□□□□ -0.85
PDE6A-202ENST00000508173 FYCO1Q9BQS8 1478 aa9.77□□□□□ -0.85
PDE6A-202ENST00000508173 DDX11L8A8MPP1 907 aa9.77□□□□□ -0.85
PDE6A-202ENST00000508173 RALBP1Q15311 655 aa9.77□□□□□ -0.85
PDE6A-202ENST00000508173 STRN4Q9NRL3 753 aa9.77□□□□□ -0.85
PDE6A-202ENST00000508173 H3BQV1 296 aa9.77□□□□□ -0.85
PDE6A-202ENST00000508173 ADAMTS2O95450 1211 aa9.77□□□□□ -0.85
PDE6A-202ENST00000508173 CCDC27Q2M243 656 aa9.77□□□□□ -0.85
PDE6A-202ENST00000508173 CT47A1Q5JQC4 288 aaPredicted RBP9.77□□□□□ -0.85
PDE6A-202ENST00000508173 IFFO2Q5TF58 517 aa9.77□□□□□ -0.85
PDE6A-202ENST00000508173 TROQ12816 1431 aaPredicted RBP9.76□□□□□ -0.85
PDE6A-202ENST00000508173 PRKRIP1Q9H875 184 aaPredicted RBP9.76□□□□□ -0.85
PDE6A-202ENST00000508173 PRDM11Q9NQV5 511 aa9.76□□□□□ -0.85
PDE6A-202ENST00000508173 CCDC144AA2RUR9 1427 aa9.76□□□□□ -0.85
PDE6A-202ENST00000508173 CENPQQ7L2Z9 268 aaPredicted RBP9.76□□□□□ -0.85
PDE6A-202ENST00000508173 FAM184AQ8NB25 1140 aa9.76□□□□□ -0.85
PDE6A-202ENST00000508173 PMFBP1Q8TBY8 1022 aa9.76□□□□□ -0.85
PDE6A-202ENST00000508173 KIF6Q6ZMV9 814 aa9.76□□□□□ -0.85
PDE6A-202ENST00000508173 UHRF1BP1Q6BDS2 1440 aa9.76□□□□□ -0.85
PDE6A-202ENST00000508173 WDR97A6NE52 1622 aa9.76□□□□□ -0.85
PDE6A-202ENST00000508173 EIF4G3O43432 1585 aaKnown RBP9.76□□□□□ -0.85
PDE6A-202ENST00000508173 EIF2S2P20042 333 aaKnown RBP9.75□□□□□ -0.85
PDE6A-202ENST00000508173 AFAP1Q8N556 730 aa9.75□□□□□ -0.85
PDE6A-202ENST00000508173 TRAK1Q9UPV9 953 aa9.75□□□□□ -0.85
PDE6A-202ENST00000508173 EVC2Q86UK5 1308 aa9.75□□□□□ -0.85
PDE6A-202ENST00000508173 BAG6P46379 1132 aa9.75□□□□□ -0.85
PDE6A-202ENST00000508173 KIF15Q9NS87 1388 aa9.75□□□□□ -0.85
PDE6A-202ENST00000508173 PCMTD1Q96MG8 357 aaPredicted RBP9.74□□□□□ -0.85
PDE6A-202ENST00000508173 DDX49Q9Y6V7 483 aaKnown RBP9.74□□□□□ -0.85
PDE6A-202ENST00000508173 MPHOSPH10O00566 681 aaKnown RBP9.74□□□□□ -0.85
PDE6A-202ENST00000508173 BCL2L13Q9BXK5 485 aa9.74□□□□□ -0.85
PDE6A-202ENST00000508173 FANCAO15360 1455 aa9.74□□□□□ -0.85
PDE6A-202ENST00000508173 HSPA2P54652 639 aa9.74□□□□□ -0.85
PDE6A-202ENST00000508173 ZNF772Q68DY9 489 aaPredicted RBP9.74□□□□□ -0.85
PDE6A-202ENST00000508173 NFXL1Q6ZNB6 911 aa9.74□□□□□ -0.85
PDE6A-202ENST00000508173 ANKRD20A12PQ8NF67 263 aa9.74□□□□□ -0.85
PDE6A-202ENST00000508173 ADGRL1O94910 1474 aa9.74□□□□□ -0.85
PDE6A-202ENST00000508173 RBM42Q9BTD8 480 aaKnown RBP9.74□□□□□ -0.85
PDE6A-202ENST00000508173 FAM43AQ8N2R8 423 aa9.73□□□□□ -0.85
PDE6A-202ENST00000508173 RRP7AQ9Y3A4 280 aaKnown RBP9.73□□□□□ -0.85
PDE6A-202ENST00000508173 EHBP1L1Q8N3D4 1523 aa9.73□□□□□ -0.85
PDE6A-202ENST00000508173 RDXP35241 583 aaKnown RBP9.73□□□□□ -0.85
PDE6A-202ENST00000508173 RBM5P52756 815 aaKnown RBP eCLIP9.73□□□□□ -0.85
PDE6A-202ENST00000508173 FYB1O15117 783 aa9.73□□□□□ -0.85
PDE6A-202ENST00000508173 BEGAINQ9BUH8 593 aa9.73□□□□□ -0.85
PDE6A-202ENST00000508173 KIF14Q15058 1648 aa9.73□□□□□ -0.85
PDE6A-202ENST00000508173 SLC3A2P08195 630 aaKnown RBP9.73□□□□□ -0.85
PDE6A-202ENST00000508173 MAP3K9P80192 1104 aa9.72□□□□□ -0.85
PDE6A-202ENST00000508173 TTLL12Q14166 644 aaPredicted RBP9.72□□□□□ -0.85
PDE6A-202ENST00000508173 CPLX1O14810 134 aa9.72□□□□□ -0.85
PDE6A-202ENST00000508173 CCDC70Q6NSX1 233 aa9.72□□□□□ -0.85
PDE6A-202ENST00000508173 TMOD2Q9NZR1 351 aa9.71□□□□□ -0.85
PDE6A-202ENST00000508173 ASXL2Q76L83 1435 aa9.71□□□□□ -0.85
PDE6A-202ENST00000508173 CALRP27797 417 aaKnown RBP9.71□□□□□ -0.85
PDE6A-202ENST00000508173 RUFY2Q8WXA3 655 aa9.71□□□□□ -0.85
PDE6A-202ENST00000508173 BIVM-ERCC5R4GMW8 1640 aa9.71□□□□□ -0.85
PDE6A-202ENST00000508173 CENPJQ9HC77 1338 aaPredicted RBP9.71□□□□□ -0.86
PDE6A-202ENST00000508173 IPO7O95373 1038 aaKnown RBP9.71□□□□□ -0.86
PDE6A-202ENST00000508173 GNL3LQ9NVN8 582 aaKnown RBP9.71□□□□□ -0.86
PDE6A-202ENST00000508173 G3BP1Q13283 466 aaKnown RBP eCLIP9.71□□□□□ -0.86
PDE6A-202ENST00000508173 BRMS1Q9HCU9 246 aa9.71□□□□□ -0.86
PDE6A-202ENST00000508173 DIAPH3Q9NSV4 1193 aa9.71□□□□□ -0.86
PDE6A-202ENST00000508173 HOOK1Q9UJC3 728 aaKnown RBP9.71□□□□□ -0.86
PDE6A-202ENST00000508173 IFIT2P09913 472 aaKnown RBP9.71□□□□□ -0.86
PDE6A-202ENST00000508173 TRIM21P19474 475 aaKnown RBP9.71□□□□□ -0.86
PDE6A-202ENST00000508173 COG6Q9Y2V7 657 aa9.71□□□□□ -0.86
PDE6A-202ENST00000508173 MINK1Q8N4C8 1332 aaPredicted RBP9.7□□□□□ -0.86
PDE6A-202ENST00000508173 TOM1L2Q6ZVM7 507 aa9.7□□□□□ -0.86
PDE6A-202ENST00000508173 MYBBP1AQ9BQG0 1328 aaKnown RBP9.7□□□□□ -0.86
PDE6A-202ENST00000508173 ZNF710Q8N1W2 664 aa9.7□□□□□ -0.86
PDE6A-202ENST00000508173 ZFYVE27Q5T4F4 411 aa9.7□□□□□ -0.86
PDE6A-202ENST00000508173 RIC3Q7Z5B4 369 aa9.7□□□□□ -0.86
PDE6A-202ENST00000508173 ZNF592Q92610 1267 aa9.7□□□□□ -0.86
PDE6A-202ENST00000508173 FAM177BA6PVY3 158 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms